RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 FKBP11Q9NYL4 201 aa4.18□□□□□ -1.74
VMP1-215ENST00000592619 DOCK10Q96BY6 2186 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 CHD6Q8TD26 2715 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 EXPH5Q8NEV8 1989 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 OR2T8A6NH00 312 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 A8MWV9 139 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 H3BMG7 143 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 M0R378 163 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 CST7O76096 145 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 LTAP01374 205 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 GZMBP10144 247 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 ZNF14P17017 642 aaPredicted RBP4.17□□□□□ -1.74
VMP1-215ENST00000592619 HERVK_113P61574 105 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 DIAPH2-AS1Q14236 149 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 MRPL2Q5T653 305 aaKnown RBP4.17□□□□□ -1.74
VMP1-215ENST00000592619 Q6AWC8 147 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 IZUMO2Q6UXV1 221 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 MDP1Q86V88 176 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 SAXO1Q8IYX7 474 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 ZNF555Q8NEP9 628 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 OR5AK2Q8NH90 309 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 TMEM158Q8WZ71 300 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 FAM104AQ969W3 186 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 ZC2HC1AQ96GY0 325 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 PLEKHF2Q9H8W4 249 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 ANAPC11Q9NYG5 84 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 NOP16Q9Y3C1 178 aaKnown RBP4.17□□□□□ -1.74
VMP1-215ENST00000592619 MED13Q9UHV7 2174 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 CACNA1BQ00975 2339 aa4.17□□□□□ -1.74
VMP1-215ENST00000592619 FAM208BQ5VWN6 2430 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 TRAV13-1A0A0B4J241 112 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 SOCS1O15524 211 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 ZNF73O43830 326 aaPredicted RBP4.16□□□□□ -1.74
VMP1-215ENST00000592619 MRPS14O60783 128 aaKnown RBP4.16□□□□□ -1.74
VMP1-215ENST00000592619 EDF1O60869 148 aaKnown RBP4.16□□□□□ -1.74
VMP1-215ENST00000592619 NDUFB2O95178 105 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 PRB1P04280 392 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 ZNF705DP0CH99 300 aaPredicted RBP4.16□□□□□ -1.74
VMP1-215ENST00000592619 DNAH10OSP0CZ25 163 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 PYYP10082 97 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 LGALS3P17931 250 aaKnown RBP4.16□□□□□ -1.74
VMP1-215ENST00000592619 DAPP51397 102 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 GNGT1P63211 74 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 C2orf83Q53S99 150 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 ZNF705AQ6ZN79 300 aaPredicted RBP4.16□□□□□ -1.74
VMP1-215ENST00000592619 PHF5AQ7RTV0 110 aaKnown RBP4.16□□□□□ -1.74
VMP1-215ENST00000592619 AAED1Q7RTV5 226 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 ATOH7Q8N100 152 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 LINC00311Q8N616 119 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 DCANP1Q8TF63 244 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 BRK1Q8WUW1 75 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 HDHD3Q9BSH5 251 aaPredicted RBP4.16□□□□□ -1.74
VMP1-215ENST00000592619 VAMP8Q9BV40 100 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 NAA60Q9H7X0 242 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 SMCO4Q9NRQ5 59 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 ZNF492Q9P255 531 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 CHCHD2Q9Y6H1 151 aaPredicted RBP4.16□□□□□ -1.74
VMP1-215ENST00000592619 DSPPQ9NZW4 1301 aa4.16□□□□□ -1.74
VMP1-215ENST00000592619 CFAP46Q8IYW2 2715 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 IGLV11-55A0A075B6I3 123 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 ZNF705GA8MUZ8 300 aaPredicted RBP4.15□□□□□ -1.75
VMP1-215ENST00000592619 C9JQL5 133 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 TMEM262E9PQX1 116 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 PDCD5O14737 125 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 GEMIN2O14893 280 aaKnown RBP4.15□□□□□ -1.75
VMP1-215ENST00000592619 UQCRQO14949 82 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 APOC3P02656 99 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 HLA-DPB1P04440 258 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 SRP19P09132 144 aaKnown RBP4.15□□□□□ -1.75
VMP1-215ENST00000592619 FABP2P12104 132 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 S100A3P33764 101 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 RPS10P46783 165 aaKnown RBP4.15□□□□□ -1.75
VMP1-215ENST00000592619 ZNF80P51504 273 aaPredicted RBP4.15□□□□□ -1.75
VMP1-215ENST00000592619 ZNF136P52737 540 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 AQP4P55087 323 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 ZNF791Q3KP31 576 aaPredicted RBP4.15□□□□□ -1.75
VMP1-215ENST00000592619 C10orf91Q5T1B1 145 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 MRPL54Q6P161 138 aaKnown RBP4.15□□□□□ -1.75
VMP1-215ENST00000592619 C16orf47Q6ZP98 133 aaPredicted RBP4.15□□□□□ -1.75
VMP1-215ENST00000592619 MARCH3Q86UD3 253 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 C10orf111Q8N326 155 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 C10orf126Q8N4M7 172 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 BPIFB6Q8NFQ5 453 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 OR5C1Q8NGR4 320 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 RAB2BQ8WUD1 216 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 H1FXQ92522 213 aaKnown RBP4.15□□□□□ -1.75
VMP1-215ENST00000592619 LINC00526Q96FQ7 95 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 SEC11CQ9BY50 192 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 ATG5Q9H1Y0 275 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 CA10Q9NS85 328 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 CELA1Q9UNI1 258 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 MRPS16Q9Y3D3 137 aaKnown RBP4.15□□□□□ -1.75
VMP1-215ENST00000592619 RELNP78509 3460 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 PIEZO2Q9H5I5 2752 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 NOTCH3Q9UM47 2321 aa4.15□□□□□ -1.75
VMP1-215ENST00000592619 CACNA1GO43497 2377 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 TRAV12-2A0A075B6T6 113 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 A0A0G2JND7 137 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 A0A1B0GW54 56 aa4.14□□□□□ -1.75
VMP1-215ENST00000592619 ODAMA1E959 279 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms