RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 DAD1P61803 113 aa8.16□□□□□ -1.1
VMP1-211ENST00000591315 SUMO1P63165 101 aaKnown RBP8.16□□□□□ -1.1
VMP1-211ENST00000591315 RXFP4Q8TDU9 374 aa8.16□□□□□ -1.1
VMP1-211ENST00000591315 TMED6Q8WW62 240 aa8.16□□□□□ -1.1
VMP1-211ENST00000591315 MAP1LC3BQ9GZQ8 125 aa8.16□□□□□ -1.1
VMP1-211ENST00000591315 TMEM167BQ9NRX6 74 aa8.16□□□□□ -1.1
VMP1-211ENST00000591315 IGHV4-4A0A075B6R2 117 aa8.15□□□□□ -1.1
VMP1-211ENST00000591315 F6UZH7 168 aa8.15□□□□□ -1.1
VMP1-211ENST00000591315 PFDN1O60925 122 aa8.15□□□□□ -1.1
VMP1-211ENST00000591315 TCRAP04437 139 aa8.15□□□□□ -1.1
VMP1-211ENST00000591315 MUC21Q5SSG8 566 aa8.15□□□□□ -1.1
VMP1-211ENST00000591315 TMEM263Q8WUH6 116 aaKnown RBP8.15□□□□□ -1.1
VMP1-211ENST00000591315 C16orf74Q96GX8 76 aa8.15□□□□□ -1.1
VMP1-211ENST00000591315 LINC00479Q96M42 142 aa8.15□□□□□ -1.1
VMP1-211ENST00000591315 GSN-AS1Q9NRJ2 163 aa8.15□□□□□ -1.1
VMP1-211ENST00000591315 TRAV34A0A0B4J273 112 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 LYRM9A8MSI8 78 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 IGLV2-11P01706 119 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 C1QBP02746 253 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 NMBP08949 121 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 SEC11BP0C7V7 166 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 FAM74A1Q5RGS3 127 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 ZNF493Q6ZR52 646 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 CCDC28AQ8IWP9 274 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 C5orf17Q8NAS9 161 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 C11orf72Q8NBR9 251 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 FAM213BQ8TBF2 198 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 C8orf49Q96NF6 230 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 PYGO2Q9BRQ0 406 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 EPDR1Q9UM22 224 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 KLF12Q9Y4X4 402 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 TIMM8BQ9Y5J9 83 aaPredicted RBP8.14□□□□□ -1.11
VMP1-211ENST00000591315 MUC4Q99102 2169 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 NACAE9PAV3 2078 aa8.14□□□□□ -1.11
VMP1-211ENST00000591315 IGHV1OR15-1A0A075B7D0 117 aa8.13□□□□□ -1.11
VMP1-211ENST00000591315 A0A1W2PRE2 83 aa8.13□□□□□ -1.11
VMP1-211ENST00000591315 GAGE12BA1L429 117 aa8.13□□□□□ -1.11
VMP1-211ENST00000591315 CBY3A6NI87 242 aa8.13□□□□□ -1.11
VMP1-211ENST00000591315 FAM74A7A6NL05 159 aa8.13□□□□□ -1.11
VMP1-211ENST00000591315 GAGE7O76087 117 aa8.13□□□□□ -1.11
VMP1-211ENST00000591315 GAGE12FP0CL80 117 aa8.13□□□□□ -1.11
VMP1-211ENST00000591315 GAGE12GP0CL81 117 aa8.13□□□□□ -1.11
VMP1-211ENST00000591315 GAGE12IP0CL82 117 aa8.13□□□□□ -1.11
VMP1-211ENST00000591315 ZNF80P51504 273 aaPredicted RBP8.13□□□□□ -1.11
VMP1-211ENST00000591315 Q6ZTI0 123 aa8.13□□□□□ -1.11
VMP1-211ENST00000591315 AKAP14Q86UN6 197 aa8.13□□□□□ -1.11
VMP1-211ENST00000591315 EIF4E3Q8N5X7 224 aaKnown RBP8.13□□□□□ -1.11
VMP1-211ENST00000591315 TRBV7-9A0A0J9YWB2 115 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 RGS13O14921 159 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 CCL20P78556 96 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 TMEM88Q6PEY1 159 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 PRNTQ86SH4 94 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 C9orf62Q8N4C0 152 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 ARL6IP6Q8N6S5 226 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 LINC00612Q8N6U2 182 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 STOML3Q8TAV4 291 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 SFT2D1Q8WV19 159 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 MBD3L1Q8WWY6 194 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 LINC00467Q9BRT7 94 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 TREM1Q9NP99 234 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 NAGKQ9UJ70 344 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 PSG8Q9UQ74 426 aa8.12□□□□□ -1.11
VMP1-211ENST00000591315 TEX48A0A1B0GUV7 120 aa8.11□□□□□ -1.11
VMP1-211ENST00000591315 IFNA7P01567 189 aa8.11□□□□□ -1.11
VMP1-211ENST00000591315 TPT1P13693 172 aaKnown RBP8.11□□□□□ -1.11
VMP1-211ENST00000591315 ATP5G3P48201 142 aa8.11□□□□□ -1.11
VMP1-211ENST00000591315 NKX2-5P52952 324 aaPredicted RBP8.11□□□□□ -1.11
VMP1-211ENST00000591315 ANXA2RQ3ZCQ2 193 aa8.11□□□□□ -1.11
VMP1-211ENST00000591315 Q6AWC8 147 aa8.11□□□□□ -1.11
VMP1-211ENST00000591315 MDFICQ9P1T7 246 aa8.11□□□□□ -1.11
VMP1-211ENST00000591315 C11orf21Q9P2W6 132 aa8.11□□□□□ -1.11
VMP1-211ENST00000591315 LENEPQ9Y5L5 61 aa8.11□□□□□ -1.11
VMP1-211ENST00000591315 SNURFLB1AK76 121 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 UMAD1C9J7I0 102 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 F5H768 121 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 PEX7O00628 323 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 GNRH2O43555 120 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 PAGE4O60829 102 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 FLI1Q01543 452 aaPredicted RBP8.1□□□□□ -1.11
VMP1-211ENST00000591315 TMEM183BQ1AE95 376 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 C4orf48Q5BLP8 95 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 CST9LP1Q5W188 147 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 LGALS9CQ6DKI2 356 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 TMEM183AQ8IXX5 376 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 CYB561D1Q8N8Q1 229 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 ATG101Q9BSB4 218 aa8.1□□□□□ -1.11
VMP1-211ENST00000591315 MRPL16Q9NX20 251 aaKnown RBP8.1□□□□□ -1.11
VMP1-211ENST00000591315 TRGV1A0A0A0MS02 117 aa8.09□□□□□ -1.11
VMP1-211ENST00000591315 HOXA5P20719 270 aa8.09□□□□□ -1.11
VMP1-211ENST00000591315 TCL1AP56279 114 aa8.09□□□□□ -1.11
VMP1-211ENST00000591315 DAZ2Q13117 558 aaKnown RBP8.09□□□□□ -1.11
VMP1-211ENST00000591315 TMEM75Q8N9X5 138 aa8.09□□□□□ -1.11
VMP1-211ENST00000591315 NDUFAF3Q9BU61 184 aa8.09□□□□□ -1.11
VMP1-211ENST00000591315 DNAH2Q9P225 4427 aa8.09□□□□□ -1.12
VMP1-211ENST00000591315 SPINK4O60575 86 aa8.08□□□□□ -1.12
VMP1-211ENST00000591315 GCGP01275 180 aa8.08□□□□□ -1.12
VMP1-211ENST00000591315 ATP5G1P05496 136 aa8.08□□□□□ -1.12
VMP1-211ENST00000591315 H2AFB1P0C5Y9 115 aa8.08□□□□□ -1.12
VMP1-211ENST00000591315 EIF5AP63241 154 aaKnown RBP8.08□□□□□ -1.12
VMP1-211ENST00000591315 ZNF680Q8NEM1 530 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms