RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 ERCC8Q13216 396 aa11.9□□□□□ -0.5
RETREG3-210ENST00000590541 CDPF1Q6NVV7 123 aa11.9□□□□□ -0.5
RETREG3-210ENST00000590541 FAM122CQ6P4D5 195 aa11.9□□□□□ -0.5
RETREG3-210ENST00000590541 ZNF324O75467 553 aaPredicted RBP11.89□□□□□ -0.51
RETREG3-210ENST00000590541 SMR3BP02814 79 aaPredicted RBP11.89□□□□□ -0.51
RETREG3-210ENST00000590541 OR10J4P0C629 311 aa11.89□□□□□ -0.51
RETREG3-210ENST00000590541 HOXA5P20719 270 aa11.89□□□□□ -0.51
RETREG3-210ENST00000590541 KRTAP10-1P60331 282 aa11.89□□□□□ -0.51
RETREG3-210ENST00000590541 ANXA2RQ3ZCQ2 193 aa11.89□□□□□ -0.51
RETREG3-210ENST00000590541 ZNF492Q9P255 531 aa11.89□□□□□ -0.51
RETREG3-210ENST00000590541 ALG5Q9Y673 324 aa11.89□□□□□ -0.51
RETREG3-210ENST00000590541 UBE2L3P68036 154 aaKnown RBP11.88□□□□□ -0.51
RETREG3-210ENST00000590541 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
RETREG3-210ENST00000590541 EIF4E3Q8N5X7 224 aaKnown RBP11.88□□□□□ -0.51
RETREG3-210ENST00000590541 ASB13Q8WXK3 278 aa11.88□□□□□ -0.51
RETREG3-210ENST00000590541 SMIM3Q9BZL3 60 aa11.88□□□□□ -0.51
RETREG3-210ENST00000590541 IGKV2-40A0A087WW87 121 aaPredicted RBP11.87□□□□□ -0.51
RETREG3-210ENST00000590541 A0A1W2PPV4 95 aa11.87□□□□□ -0.51
RETREG3-210ENST00000590541 IGKV2D-40P01614 121 aaPredicted RBP11.87□□□□□ -0.51
RETREG3-210ENST00000590541 RNASE4P34096 147 aaKnown RBP11.87□□□□□ -0.51
RETREG3-210ENST00000590541 ZNF138P52744 262 aa11.87□□□□□ -0.51
RETREG3-210ENST00000590541 RANP62826 216 aaKnown RBP11.87□□□□□ -0.51
RETREG3-210ENST00000590541 ZNF266Q14584 549 aa11.87□□□□□ -0.51
RETREG3-210ENST00000590541 FAM74A1Q5RGS3 127 aa11.87□□□□□ -0.51
RETREG3-210ENST00000590541 IBA57Q5T440 356 aaKnown RBP11.87□□□□□ -0.51
RETREG3-210ENST00000590541 PQLC2Q6ZP29 291 aa11.87□□□□□ -0.51
RETREG3-210ENST00000590541 ARL6IP6Q8N6S5 226 aa11.87□□□□□ -0.51
RETREG3-210ENST00000590541 PHYHIPLQ96FC7 376 aa11.87□□□□□ -0.51
RETREG3-210ENST00000590541 MED28Q9H204 178 aa11.87□□□□□ -0.51
RETREG3-210ENST00000590541 LENEPQ9Y5L5 61 aa11.87□□□□□ -0.51
RETREG3-210ENST00000590541 SRRM2Q9UQ35 2752 aaKnown RBP11.87□□□□□ -0.51
RETREG3-210ENST00000590541 H3BNG1 76 aa11.86□□□□□ -0.51
RETREG3-210ENST00000590541 ERVFC1-1P60608 527 aa11.86□□□□□ -0.51
RETREG3-210ENST00000590541 CD300CQ08708 224 aa11.86□□□□□ -0.51
RETREG3-210ENST00000590541 ZFAND2AQ8N6M9 145 aa11.86□□□□□ -0.51
RETREG3-210ENST00000590541 VGLL1Q99990 258 aa11.86□□□□□ -0.51
RETREG3-210ENST00000590541 GAGE12BA1L429 117 aa11.85□□□□□ -0.51
RETREG3-210ENST00000590541 RGS13O14921 159 aa11.85□□□□□ -0.51
RETREG3-210ENST00000590541 EREGO14944 169 aa11.85□□□□□ -0.51
RETREG3-210ENST00000590541 GAGE7O76087 117 aa11.85□□□□□ -0.51
RETREG3-210ENST00000590541 GAGE12FP0CL80 117 aa11.85□□□□□ -0.51
RETREG3-210ENST00000590541 GAGE12GP0CL81 117 aa11.85□□□□□ -0.51
RETREG3-210ENST00000590541 GAGE12IP0CL82 117 aa11.85□□□□□ -0.51
RETREG3-210ENST00000590541 BTN1A1Q13410 526 aa11.85□□□□□ -0.51
RETREG3-210ENST00000590541 C11orf72Q8NBR9 251 aa11.85□□□□□ -0.51
RETREG3-210ENST00000590541 TMED6Q8WW62 240 aa11.85□□□□□ -0.51
RETREG3-210ENST00000590541 WFDC1Q9HC57 220 aa11.85□□□□□ -0.51
RETREG3-210ENST00000590541 UBR4Q5T4S7 5183 aa11.85□□□□□ -0.51
RETREG3-210ENST00000590541 TCL1AP56279 114 aa11.84□□□□□ -0.51
RETREG3-210ENST00000590541 AQP10Q96PS8 301 aa11.84□□□□□ -0.51
RETREG3-210ENST00000590541 OTORQ9NRC9 128 aa11.84□□□□□ -0.51
RETREG3-210ENST00000590541 GSN-AS1Q9NRJ2 163 aa11.84□□□□□ -0.51
RETREG3-210ENST00000590541 TNFRSF18Q9Y5U5 241 aa11.84□□□□□ -0.51
RETREG3-210ENST00000590541 IGHV1OR15-1A0A075B7D0 117 aa11.83□□□□□ -0.52
RETREG3-210ENST00000590541 DIRC3C9JPN6 131 aa11.83□□□□□ -0.52
RETREG3-210ENST00000590541 J3QL48 77 aa11.83□□□□□ -0.52
RETREG3-210ENST00000590541 DNAH10OSP0CZ25 163 aa11.83□□□□□ -0.52
RETREG3-210ENST00000590541 OR2G3Q8NGZ4 309 aa11.83□□□□□ -0.52
RETREG3-210ENST00000590541 CMTM2Q8TAZ6 248 aa11.83□□□□□ -0.52
RETREG3-210ENST00000590541 TRGV2A0A075B6R0 118 aa11.82□□□□□ -0.52
RETREG3-210ENST00000590541 A0A096LPF7 62 aa11.82□□□□□ -0.52
RETREG3-210ENST00000590541 SIVA1O15304 175 aa11.82□□□□□ -0.52
RETREG3-210ENST00000590541 MBP02144 154 aa11.82□□□□□ -0.52
RETREG3-210ENST00000590541 SERF2P84101 59 aa11.82□□□□□ -0.52
RETREG3-210ENST00000590541 Q6ZTI0 123 aa11.82□□□□□ -0.52
RETREG3-210ENST00000590541 OR10G4Q8NGN3 311 aa11.82□□□□□ -0.52
RETREG3-210ENST00000590541 OR10G9Q8NGN4 311 aa11.82□□□□□ -0.52
RETREG3-210ENST00000590541 OR10G7Q8NGN6 311 aa11.82□□□□□ -0.52
RETREG3-210ENST00000590541 ARPC5LQ9BPX5 153 aa11.82□□□□□ -0.52
RETREG3-210ENST00000590541 PSMG3Q9BT73 122 aaPredicted RBP11.82□□□□□ -0.52
RETREG3-210ENST00000590541 A0A087WTM6 91 aa11.81□□□□□ -0.52
RETREG3-210ENST00000590541 PGPA6NDG6 321 aa11.81□□□□□ -0.52
RETREG3-210ENST00000590541 FAM229AH3BQW9 127 aa11.81□□□□□ -0.52
RETREG3-210ENST00000590541 SPINK4O60575 86 aa11.81□□□□□ -0.52
RETREG3-210ENST00000590541 GIPP09681 153 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-210ENST00000590541 HAMPP81172 84 aa11.81□□□□□ -0.52
RETREG3-210ENST00000590541 Q6ZSN1 163 aa11.81□□□□□ -0.52
RETREG3-210ENST00000590541 VSIG2Q96IQ7 327 aa11.81□□□□□ -0.52
RETREG3-210ENST00000590541 TRGV1A0A0A0MS02 117 aa11.8□□□□□ -0.52
RETREG3-210ENST00000590541 PRR9Q5T870 116 aa11.8□□□□□ -0.52
RETREG3-210ENST00000590541 Q6AWC8 147 aa11.8□□□□□ -0.52
RETREG3-210ENST00000590541 INO80EQ8NBZ0 244 aaPredicted RBP11.8□□□□□ -0.52
RETREG3-210ENST00000590541 Q8TAT8 98 aa11.8□□□□□ -0.52
RETREG3-210ENST00000590541 TMPRSS5Q9H3S3 457 aa11.8□□□□□ -0.52
RETREG3-210ENST00000590541 KLF12Q9Y4X4 402 aa11.8□□□□□ -0.52
RETREG3-210ENST00000590541 SERTM2A0A1B0GWG4 89 aa11.79□□□□□ -0.52
RETREG3-210ENST00000590541 CDC34P49427 236 aaPredicted RBP11.79□□□□□ -0.52
RETREG3-210ENST00000590541 RAB2AP61019 212 aa11.79□□□□□ -0.52
RETREG3-210ENST00000590541 ZNF415Q09FC8 603 aa11.79□□□□□ -0.52
RETREG3-210ENST00000590541 SLAQ13239 276 aa11.79□□□□□ -0.52
RETREG3-210ENST00000590541 HYLS1Q96M11 299 aa11.79□□□□□ -0.52
RETREG3-210ENST00000590541 HMCN2Q8NDA2 5059 aa11.79□□□□□ -0.52
RETREG3-210ENST00000590541 GCSHP23434 173 aa11.78□□□□□ -0.52
RETREG3-210ENST00000590541 HSD17B11Q8NBQ5 300 aa11.78□□□□□ -0.52
RETREG3-210ENST00000590541 ST6GAL2Q96JF0 529 aa11.78□□□□□ -0.52
RETREG3-210ENST00000590541 STAG3L2P0CL84 134 aa11.77□□□□□ -0.53
RETREG3-210ENST00000590541 STAG3L3P0CL85 134 aa11.77□□□□□ -0.53
RETREG3-210ENST00000590541 ATP6V0CP27449 155 aa11.77□□□□□ -0.53
RETREG3-210ENST00000590541 FAM159AQ6UWV7 190 aa11.77□□□□□ -0.53
RETREG3-210ENST00000590541 SPXQ9BT56 116 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms