RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 RNASE4P34096 147 aaKnown RBP9.92□□□□□ -0.82
VMP1-210ENST00000589823 TAS2R60P59551 318 aa9.92□□□□□ -0.82
VMP1-210ENST00000589823 BTN1A1Q13410 526 aa9.92□□□□□ -0.82
VMP1-210ENST00000589823 KIR3DS1Q14943 382 aa9.92□□□□□ -0.82
VMP1-210ENST00000589823 TVP23CQ96ET8 276 aa9.92□□□□□ -0.82
VMP1-210ENST00000589823 C20orf144Q9BQM9 153 aa9.92□□□□□ -0.82
VMP1-210ENST00000589823 OVOL2Q9BRP0 275 aa9.92□□□□□ -0.82
VMP1-210ENST00000589823 NIPSNAP3BQ9BS92 247 aa9.92□□□□□ -0.82
VMP1-210ENST00000589823 TRAV12-3A0A0B4J271 114 aa9.91□□□□□ -0.82
VMP1-210ENST00000589823 RPL35P42766 123 aaKnown RBP9.91□□□□□ -0.82
VMP1-210ENST00000589823 CEBPGP53567 150 aa9.91□□□□□ -0.82
VMP1-210ENST00000589823 SMUG1Q53HV7 270 aa9.91□□□□□ -0.82
VMP1-210ENST00000589823 C1orf158Q8N1D5 194 aa9.91□□□□□ -0.82
VMP1-210ENST00000589823 TMEM256Q8N2U0 113 aa9.91□□□□□ -0.82
VMP1-210ENST00000589823 OR11H2Q8NH07 326 aa9.91□□□□□ -0.82
VMP1-210ENST00000589823 DERL1Q9BUN8 251 aa9.91□□□□□ -0.82
VMP1-210ENST00000589823 LTAP01374 205 aa9.9□□□□□ -0.82
VMP1-210ENST00000589823 PRR9Q5T870 116 aa9.9□□□□□ -0.82
VMP1-210ENST00000589823 BAGE2Q86Y30 109 aa9.9□□□□□ -0.82
VMP1-210ENST00000589823 C8orf49Q96NF6 230 aa9.9□□□□□ -0.82
VMP1-210ENST00000589823 LINC01587Q99440 93 aa9.9□□□□□ -0.82
VMP1-210ENST00000589823 SMDT1Q9H4I9 107 aa9.9□□□□□ -0.82
VMP1-210ENST00000589823 HUWE1Q7Z6Z7 4374 aaKnown RBP9.89□□□□□ -0.83
VMP1-210ENST00000589823 TRAV21A0A0B4J279 112 aa9.89□□□□□ -0.83
VMP1-210ENST00000589823 RAB19A4D1S5 217 aa9.89□□□□□ -0.83
VMP1-210ENST00000589823 H7BYZ3 331 aa9.89□□□□□ -0.83
VMP1-210ENST00000589823 SRP19P09132 144 aaKnown RBP9.89□□□□□ -0.83
VMP1-210ENST00000589823 RBMY1A1P0DJD3 496 aaKnown RBP9.89□□□□□ -0.83
VMP1-210ENST00000589823 RBMY1CP0DJD4 496 aa9.89□□□□□ -0.83
VMP1-210ENST00000589823 RBMY1FQ15415 496 aaKnown RBP9.89□□□□□ -0.83
VMP1-210ENST00000589823 ZNF674Q2M3X9 581 aa9.89□□□□□ -0.83
VMP1-210ENST00000589823 ZNF705AQ6ZN79 300 aaPredicted RBP9.89□□□□□ -0.83
VMP1-210ENST00000589823 PARLQ9H300 379 aa9.89□□□□□ -0.83
VMP1-210ENST00000589823 SMIM9A6NGZ8 99 aa9.88□□□□□ -0.83
VMP1-210ENST00000589823 ZNF324O75467 553 aaPredicted RBP9.88□□□□□ -0.83
VMP1-210ENST00000589823 GCGP01275 180 aa9.88□□□□□ -0.83
VMP1-210ENST00000589823 GNG4P50150 75 aa9.88□□□□□ -0.83
VMP1-210ENST00000589823 CENPWQ5EE01 88 aa9.88□□□□□ -0.83
VMP1-210ENST00000589823 Q6AWC8 147 aa9.88□□□□□ -0.83
VMP1-210ENST00000589823 TMEM183AQ8IXX5 376 aa9.88□□□□□ -0.83
VMP1-210ENST00000589823 NEU1Q99519 415 aa9.88□□□□□ -0.83
VMP1-210ENST00000589823 MIFP14174 115 aa9.87□□□□□ -0.83
VMP1-210ENST00000589823 HTN1P15515 57 aa9.87□□□□□ -0.83
VMP1-210ENST00000589823 SRSF3P84103 164 aaKnown RBP9.87□□□□□ -0.83
VMP1-210ENST00000589823 RRN3P1Q2M238 152 aa9.87□□□□□ -0.83
VMP1-210ENST00000589823 COX8CQ7Z4L0 72 aa9.87□□□□□ -0.83
VMP1-210ENST00000589823 NHLRC2Q8NBF2 726 aa9.87□□□□□ -0.83
VMP1-210ENST00000589823 SMIM12Q96EX1 92 aa9.87□□□□□ -0.83
VMP1-210ENST00000589823 PYGO2Q9BRQ0 406 aa9.87□□□□□ -0.83
VMP1-210ENST00000589823 FABP5P3A8MUU1 101 aa9.86□□□□□ -0.83
VMP1-210ENST00000589823 ZNF705GA8MUZ8 300 aaPredicted RBP9.86□□□□□ -0.83
VMP1-210ENST00000589823 PFN1P07737 140 aaKnown RBP9.86□□□□□ -0.83
VMP1-210ENST00000589823 MGST1P10620 155 aaKnown RBP9.86□□□□□ -0.83
VMP1-210ENST00000589823 ZNF80P51504 273 aaPredicted RBP9.86□□□□□ -0.83
VMP1-210ENST00000589823 FAM159AQ6UWV7 190 aa9.86□□□□□ -0.83
VMP1-210ENST00000589823 ZC2HC1AQ96GY0 325 aa9.86□□□□□ -0.83
VMP1-210ENST00000589823 MLST8Q9BVC4 326 aa9.86□□□□□ -0.83
VMP1-210ENST00000589823 X6R8D5 127 aa9.86□□□□□ -0.83
VMP1-210ENST00000589823 IGHV1OR15-1A0A075B7D0 117 aa9.85□□□□□ -0.83
VMP1-210ENST00000589823 ZNF727A8MUV8 499 aa9.85□□□□□ -0.83
VMP1-210ENST00000589823 C9JCJ5 164 aa9.85□□□□□ -0.83
VMP1-210ENST00000589823 C9JQL5 133 aa9.85□□□□□ -0.83
VMP1-210ENST00000589823 FAM74A3Q4VXF1 159 aa9.85□□□□□ -0.83
VMP1-210ENST00000589823 FAM162BQ5T6X4 162 aa9.85□□□□□ -0.83
VMP1-210ENST00000589823 SMIM7Q9BQ49 75 aa9.85□□□□□ -0.83
VMP1-210ENST00000589823 LINC00467Q9BRT7 94 aa9.85□□□□□ -0.83
VMP1-210ENST00000589823 BIN3Q9NQY0 253 aa9.85□□□□□ -0.83
VMP1-210ENST00000589823 NAGKQ9UJ70 344 aa9.85□□□□□ -0.83
VMP1-210ENST00000589823 U3KQK5 164 aa9.85□□□□□ -0.83
VMP1-210ENST00000589823 TRBV20OR9-2A0A075B6H5 130 aa9.84□□□□□ -0.83
VMP1-210ENST00000589823 IGHV4-28A0A0C4DH34 117 aa9.84□□□□□ -0.83
VMP1-210ENST00000589823 LINC00862A6NCI5 91 aa9.84□□□□□ -0.83
VMP1-210ENST00000589823 CBY3A6NI87 242 aa9.84□□□□□ -0.83
VMP1-210ENST00000589823 MUC21Q5SSG8 566 aa9.84□□□□□ -0.83
VMP1-210ENST00000589823 PRR27Q6MZM9 219 aa9.84□□□□□ -0.83
VMP1-210ENST00000589823 UQCC3Q6UW78 93 aa9.84□□□□□ -0.83
VMP1-210ENST00000589823 Q6ZQT7 251 aa9.84□□□□□ -0.83
VMP1-210ENST00000589823 COMMD7Q86VX2 200 aa9.84□□□□□ -0.83
VMP1-210ENST00000589823 EIF4E3Q8N5X7 224 aaKnown RBP9.84□□□□□ -0.83
VMP1-210ENST00000589823 NBEAL2Q6ZNJ1 2754 aa9.83□□□□□ -0.84
VMP1-210ENST00000589823 TMEM189A5PLL7 270 aa9.83□□□□□ -0.84
VMP1-210ENST00000589823 SH2D1AO60880 128 aa9.83□□□□□ -0.84
VMP1-210ENST00000589823 IGLV2-8P01709 118 aa9.83□□□□□ -0.84
VMP1-210ENST00000589823 ANXA2RQ3ZCQ2 193 aa9.83□□□□□ -0.84
VMP1-210ENST00000589823 SOHLH1Q5JUK2 328 aa9.83□□□□□ -0.84
VMP1-210ENST00000589823 ZNF493Q6ZR52 646 aa9.83□□□□□ -0.84
VMP1-210ENST00000589823 Q8NAQ8 132 aa9.83□□□□□ -0.84
VMP1-210ENST00000589823 C16orf74Q96GX8 76 aa9.83□□□□□ -0.84
VMP1-210ENST00000589823 KCNS1Q96KK3 526 aa9.83□□□□□ -0.84
VMP1-210ENST00000589823 SDF2L1Q9HCN8 221 aa9.83□□□□□ -0.84
VMP1-210ENST00000589823 TRGV11A0A075B6L2 103 aa9.82□□□□□ -0.84
VMP1-210ENST00000589823 PGPEP1LA6NFU8 196 aa9.82□□□□□ -0.84
VMP1-210ENST00000589823 ORM1P02763 201 aa9.82□□□□□ -0.84
VMP1-210ENST00000589823 PRM2P04554 102 aa9.82□□□□□ -0.84
VMP1-210ENST00000589823 AZU1P20160 251 aa9.82□□□□□ -0.84
VMP1-210ENST00000589823 CRIP1P50238 77 aa9.82□□□□□ -0.84
VMP1-210ENST00000589823 TMEM263Q8WUH6 116 aaKnown RBP9.82□□□□□ -0.84
VMP1-210ENST00000589823 DAZAP1Q96EP5 407 aaKnown RBP9.82□□□□□ -0.84
VMP1-210ENST00000589823 C11orf68Q9H3H3 251 aaKnown RBP9.82□□□□□ -0.84
VMP1-210ENST00000589823 LY96Q9Y6Y9 160 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms