RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 MS4A18Q3C1V0 323 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 TRPT1Q86TN4 253 aaKnown RBP4.52□□□□□ -1.69
SMAD4-208ENST00000589706 MARCH3Q86UD3 253 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 CEND1Q8N111 149 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 OR2A1Q8NGT9 310 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 TM4SF19Q96DZ7 209 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 COQ2Q96H96 371 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 LINC01600Q96MT4 127 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 S1PR3Q99500 378 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 HSD17B10Q99714 261 aaKnown RBP4.52□□□□□ -1.69
SMAD4-208ENST00000589706 NAA38Q9BRA0 125 aaKnown RBP4.52□□□□□ -1.69
SMAD4-208ENST00000589706 SLC25A2Q9BXI2 301 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 NPCDR1Q9BY65 106 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 IMUPQ9GZP8 106 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 FBXL15Q9H469 300 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 PRO0628Q9UI54 55 aa4.52□□□□□ -1.69
SMAD4-208ENST00000589706 IGKV1D-42A0A075B6H8 117 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 A0A087WZ39 114 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 A0A1B0GXF2 115 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 TCRBV4S1A1TA0A5B7 111 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 CHEK1O14757 476 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 UQCRQO14949 82 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 RBP4P02753 201 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 KISS1Q15726 138 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 ACP7Q6ZNF0 438 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 Q6ZSR3 168 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 SSX8Q7RTT4 187 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 RPRMLQ8N4K4 120 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 OR1L4Q8NGR5 311 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 FAM57AQ8TBR7 257 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 MRPL53Q96EL3 112 aaKnown RBP4.51□□□□□ -1.69
SMAD4-208ENST00000589706 TMEM167BQ9NRX6 74 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 TP73-AS1Q9UF72 201 aa4.51□□□□□ -1.69
SMAD4-208ENST00000589706 TMEM89A2RUT3 159 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 A8MWL6 223 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 A8MWV9 139 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 H3BP45 60 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 P04436 131 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 RPL35AP18077 110 aaKnown RBP4.5□□□□□ -1.69
SMAD4-208ENST00000589706 RPS27P42677 84 aaKnown RBP4.5□□□□□ -1.69
SMAD4-208ENST00000589706 EMDP50402 254 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 DAP3P51398 398 aaKnown RBP4.5□□□□□ -1.69
SMAD4-208ENST00000589706 MFAP2P55001 183 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 SRYQ05066 204 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 PRDX1Q06830 199 aaKnown RBP4.5□□□□□ -1.69
SMAD4-208ENST00000589706 C12orf74Q32Q52 190 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 CENPWQ5EE01 88 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 C3orf22Q8N5N4 141 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 OR4C13Q8NGP0 309 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 OR1L8Q8NGR8 309 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 FLYWCH2Q96CP2 140 aaKnown RBP4.5□□□□□ -1.69
SMAD4-208ENST00000589706 CHAC1Q9BUX1 264 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 IDI2-AS1Q9NZ38 188 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 TAC3Q9UHF0 121 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 PROCRQ9UNN8 238 aa4.5□□□□□ -1.69
SMAD4-208ENST00000589706 PHF3Q92576 2039 aaKnown RBP4.5□□□□□ -1.69
SMAD4-208ENST00000589706 ARID1AO14497 2285 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 TRBV7-7A0A0K0K1E9 115 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 A0A1B0GUV1 79 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 SRRM4A7MD48 611 aaKnown RBP4.49□□□□□ -1.69
SMAD4-208ENST00000589706 BUB3O43684 328 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 IGLV3-1P01715 115 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 IGHG1P01857 330 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 SCGB1C2P0DMR2 95 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 CNTFRP26992 372 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 GCHFRP30047 84 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 NMUP48645 174 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 FXYD2P54710 66 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 DSCR4P56555 118 aaPredicted RBP4.49□□□□□ -1.69
SMAD4-208ENST00000589706 HSPE1P61604 102 aaKnown RBP4.49□□□□□ -1.69
SMAD4-208ENST00000589706 HBBP68871 147 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 SPANXN5Q5MJ07 72 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 C9orf153Q5TBE3 101 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 TEX36Q5VZQ5 186 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 DGAT2L6Q6ZPD8 337 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 C6orf201Q7Z4U5 140 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 C8orf31Q8N9H6 132 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 NT5CQ8TCD5 201 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 MYOZ3Q8TDC0 251 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 BAALCQ8WXS3 180 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 LINC00526Q96FQ7 95 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 CARD19Q96LW7 228 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 KIR2DL4Q99706 377 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 HES7Q9BYE0 225 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 GFRA4Q9GZZ7 299 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 NHP2Q9NX24 153 aaKnown RBP4.49□□□□□ -1.69
SMAD4-208ENST00000589706 C21orf62Q9NYP8 219 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 SELENOKQ9Y6D0 94 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 DYSFO75923 2080 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 MPDZO75970 2070 aa4.49□□□□□ -1.69
SMAD4-208ENST00000589706 ZNF816-ZNF321PA0A0X1KG74 233 aa4.48□□□□□ -1.69
SMAD4-208ENST00000589706 FAM240AA0A1B0GVK7 77 aa4.48□□□□□ -1.69
SMAD4-208ENST00000589706 A0A1W2PPR1 153 aa4.48□□□□□ -1.69
SMAD4-208ENST00000589706 PMS2P5A8MQ11 134 aa4.48□□□□□ -1.69
SMAD4-208ENST00000589706 SMIM1B2RUZ4 78 aa4.48□□□□□ -1.69
SMAD4-208ENST00000589706 J3QLI3 93 aa4.48□□□□□ -1.69
SMAD4-208ENST00000589706 PGLYRP1O75594 196 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-208ENST00000589706 NCR2O95944 276 aa4.48□□□□□ -1.69
SMAD4-208ENST00000589706 IL4P05112 153 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms