RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 ASH1LQ9NR48 2969 aaKnown RBP9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 OR4C46A6NHA9 309 aa9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 FAM159AQ6UWV7 190 aa9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 MAP1LC3AQ9H492 121 aa9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 DAZ1Q9NQZ3 744 aaKnown RBP9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 HINT1P49773 126 aaPredicted RBP9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 Q6AWC8 147 aa9.61□□□□□ -0.87
SMARCA4-208ENST00000585799 SMG1Q96Q15 3661 aaKnown RBP9.6□□□□□ -0.87
SMARCA4-208ENST00000585799 IFI27P40305 119 aaPredicted RBP9.6□□□□□ -0.87
SMARCA4-208ENST00000585799 C9orf139Q6ZV77 190 aa9.6□□□□□ -0.87
SMARCA4-208ENST00000585799 GATA3P23771 443 aa9.6□□□□□ -0.87
SMARCA4-208ENST00000585799 SNRPD3P62318 126 aaKnown RBP9.6□□□□□ -0.87
SMARCA4-208ENST00000585799 DEFB113Q30KQ7 82 aa9.6□□□□□ -0.87
SMARCA4-208ENST00000585799 MLST8Q9BVC4 326 aa9.6□□□□□ -0.87
SMARCA4-208ENST00000585799 TRAV12-3A0A0B4J271 114 aa9.6□□□□□ -0.87
SMARCA4-208ENST00000585799 F8W735 103 aaPredicted RBP9.6□□□□□ -0.87
SMARCA4-208ENST00000585799 ZNF80P51504 273 aaPredicted RBP9.6□□□□□ -0.87
SMARCA4-208ENST00000585799 WIPF2Q8TF74 440 aaPredicted RBP9.6□□□□□ -0.87
SMARCA4-208ENST00000585799 SMIM12Q96EX1 92 aa9.6□□□□□ -0.87
SMARCA4-208ENST00000585799 CYB5R2Q6BCY4 276 aa9.59□□□□□ -0.87
SMARCA4-208ENST00000585799 SMAD5-AS1Q9Y6J3 95 aa9.59□□□□□ -0.87
SMARCA4-208ENST00000585799 VWC2LB2RUY7 222 aa9.59□□□□□ -0.87
SMARCA4-208ENST00000585799 CD7P09564 240 aa9.59□□□□□ -0.87
SMARCA4-208ENST00000585799 SCGB2A2Q13296 93 aa9.59□□□□□ -0.87
SMARCA4-208ENST00000585799 RASL11AQ6T310 242 aa9.59□□□□□ -0.87
SMARCA4-208ENST00000585799 A6NDX4 124 aa9.59□□□□□ -0.87
SMARCA4-208ENST00000585799 FCER1GP30273 86 aa9.59□□□□□ -0.87
SMARCA4-208ENST00000585799 ASIPP42127 132 aa9.59□□□□□ -0.87
SMARCA4-208ENST00000585799 CT83Q5H943 113 aa9.59□□□□□ -0.87
SMARCA4-208ENST00000585799 TP53TG3Q9ULZ0 132 aa9.59□□□□□ -0.87
SMARCA4-208ENST00000585799 C19orf71A6NCJ1 209 aa9.58□□□□□ -0.88
SMARCA4-208ENST00000585799 NDUFA4O00483 81 aa9.58□□□□□ -0.88
SMARCA4-208ENST00000585799 IGHG2P01859 326 aa9.58□□□□□ -0.88
SMARCA4-208ENST00000585799 LINC00173Q6ZV60 143 aa9.58□□□□□ -0.88
SMARCA4-208ENST00000585799 CRIP1P50238 77 aa9.58□□□□□ -0.88
SMARCA4-208ENST00000585799 MAJINQ3KP22 176 aa9.58□□□□□ -0.88
SMARCA4-208ENST00000585799 PRSS57Q6UWY2 283 aa9.58□□□□□ -0.88
SMARCA4-208ENST00000585799 MBD6Q96DN6 1003 aa9.58□□□□□ -0.88
SMARCA4-208ENST00000585799 TRAV12-2A0A075B6T6 113 aa9.57□□□□□ -0.88
SMARCA4-208ENST00000585799 NMUP48645 174 aa9.57□□□□□ -0.88
SMARCA4-208ENST00000585799 NDUFAF3Q9BU61 184 aa9.57□□□□□ -0.88
SMARCA4-208ENST00000585799 GFRA4Q9GZZ7 299 aa9.57□□□□□ -0.88
SMARCA4-208ENST00000585799 TRAV26-2A0A0B4J265 109 aa9.57□□□□□ -0.88
SMARCA4-208ENST00000585799 TRAV21A0A0B4J279 112 aa9.57□□□□□ -0.88
SMARCA4-208ENST00000585799 hDV102S1A0JD36 115 aa9.57□□□□□ -0.88
SMARCA4-208ENST00000585799 IGLV2-11P01706 119 aa9.57□□□□□ -0.88
SMARCA4-208ENST00000585799 GATA1P15976 413 aaPredicted RBP9.57□□□□□ -0.88
SMARCA4-208ENST00000585799 C1orf194Q5T5A4 169 aa9.57□□□□□ -0.88
SMARCA4-208ENST00000585799 C14orf178Q8N769 122 aaPredicted RBP9.57□□□□□ -0.88
SMARCA4-208ENST00000585799 ZFAND3Q9H8U3 227 aa9.57□□□□□ -0.88
SMARCA4-208ENST00000585799 IGF1P05019 195 aa9.56□□□□□ -0.88
SMARCA4-208ENST00000585799 MRPL51Q4U2R6 128 aaKnown RBP9.56□□□□□ -0.88
SMARCA4-208ENST00000585799 KLHL30-AS1Q8NEE0 82 aa9.56□□□□□ -0.88
SMARCA4-208ENST00000585799 AP1S3Q96PC3 154 aa9.56□□□□□ -0.88
SMARCA4-208ENST00000585799 FBLL1A6NHQ2 334 aaKnown RBP9.56□□□□□ -0.88
SMARCA4-208ENST00000585799 OVOL1O14753 267 aa9.56□□□□□ -0.88
SMARCA4-208ENST00000585799 MEGF9Q9H1U4 602 aa9.56□□□□□ -0.88
SMARCA4-208ENST00000585799 NUDT3O95989 172 aa9.56□□□□□ -0.88
SMARCA4-208ENST00000585799 WFDC11Q8NEX6 87 aa9.56□□□□□ -0.88
SMARCA4-208ENST00000585799 UQCR10Q9UDW1 63 aa9.56□□□□□ -0.88
SMARCA4-208ENST00000585799 VPREB3Q9UKI3 123 aa9.56□□□□□ -0.88
SMARCA4-208ENST00000585799 IGHV7-4-1A0A0J9YVY3 117 aa9.55□□□□□ -0.88
SMARCA4-208ENST00000585799 A0A1B0GW15 77 aa9.55□□□□□ -0.88
SMARCA4-208ENST00000585799 FAM104BQ5XKR9 115 aa9.55□□□□□ -0.88
SMARCA4-208ENST00000585799 PIFOQ8TCI5 191 aa9.55□□□□□ -0.88
SMARCA4-208ENST00000585799 LEPP41159 167 aa9.55□□□□□ -0.88
SMARCA4-208ENST00000585799 FAM231BA6NCW3 169 aa9.55□□□□□ -0.88
SMARCA4-208ENST00000585799 CACNG7P62955 275 aa9.55□□□□□ -0.88
SMARCA4-208ENST00000585799 SPINK13Q1W4C9 94 aa9.55□□□□□ -0.88
SMARCA4-208ENST00000585799 ZNF48Q96MX3 618 aaPredicted RBP9.55□□□□□ -0.88
SMARCA4-208ENST00000585799 HELZ2Q9BYK8 2649 aaKnown RBP9.55□□□□□ -0.88
SMARCA4-208ENST00000585799 C7orf71A4D174 169 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 J3QKU1 62 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 NPYP01303 97 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 SMPXQ9UHP9 88 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 FLNAP21333 2647 aaKnown RBP9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 EDN2P20800 178 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 ZNF56Q15929 161 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 Q6ZQT7 251 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 ERASQ7Z444 233 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 MYOZ3Q8TDC0 251 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 IGHV1-24A0A0C4DH33 117 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 ANXA2RQ3ZCQ2 193 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 C16orf54Q6UWD8 224 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 TMEM190Q8WZ59 177 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 LINC00477Q96M19 166 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 RNF114Q9Y508 228 aa9.54□□□□□ -0.88
SMARCA4-208ENST00000585799 ITPR1Q14643 2758 aa9.53□□□□□ -0.88
SMARCA4-208ENST00000585799 EREGO14944 169 aa9.53□□□□□ -0.88
SMARCA4-208ENST00000585799 GNRH2O43555 120 aa9.53□□□□□ -0.88
SMARCA4-208ENST00000585799 ZNF25P17030 456 aaPredicted RBP9.53□□□□□ -0.88
SMARCA4-208ENST00000585799 KIR3DS1Q14943 382 aa9.53□□□□□ -0.88
SMARCA4-208ENST00000585799 KLK9Q9UKQ9 250 aa9.53□□□□□ -0.88
SMARCA4-208ENST00000585799 TCAPO15273 167 aa9.53□□□□□ -0.88
SMARCA4-208ENST00000585799 SLURP1P55000 103 aa9.53□□□□□ -0.88
SMARCA4-208ENST00000585799 DEFB131AP59861 70 aa9.53□□□□□ -0.88
SMARCA4-208ENST00000585799 TCTEX1D4Q5JR98 221 aa9.53□□□□□ -0.88
SMARCA4-208ENST00000585799 OR11H1Q8NG94 326 aa9.53□□□□□ -0.88
SMARCA4-208ENST00000585799 MIEN1Q9BRT3 115 aa9.53□□□□□ -0.88
SMARCA4-208ENST00000585799 A0A087WWL8 130 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms