RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SLC25A2Q9BXI2 301 aa9.78□□□□□ -0.84
SDF2-202ENST00000585428 AAMDCQ9H7C9 122 aa9.78□□□□□ -0.84
SDF2-202ENST00000585428 MSRB1Q9NZV6 116 aa9.78□□□□□ -0.84
SDF2-202ENST00000585428 FAT1Q14517 4588 aa9.77□□□□□ -0.85
SDF2-202ENST00000585428 UBE2L5PA0A1B0GUS4 154 aa9.77□□□□□ -0.85
SDF2-202ENST00000585428 C5orf51A6NDU8 294 aa9.77□□□□□ -0.85
SDF2-202ENST00000585428 NBEAP1P0C6P0 100 aa9.77□□□□□ -0.85
SDF2-202ENST00000585428 GCSHP23434 173 aa9.77□□□□□ -0.85
SDF2-202ENST00000585428 BAXQ07812 192 aa9.77□□□□□ -0.85
SDF2-202ENST00000585428 GCSAMLQ5JQS6 135 aa9.77□□□□□ -0.85
SDF2-202ENST00000585428 FAM122CQ6P4D5 195 aa9.77□□□□□ -0.85
SDF2-202ENST00000585428 RASL10AQ92737 203 aa9.77□□□□□ -0.85
SDF2-202ENST00000585428 MDFICQ9P1T7 246 aa9.77□□□□□ -0.85
SDF2-202ENST00000585428 SRRM2Q9UQ35 2752 aaKnown RBP9.76□□□□□ -0.85
SDF2-202ENST00000585428 E5RGE8 158 aa9.76□□□□□ -0.85
SDF2-202ENST00000585428 SMR3BP02814 79 aaPredicted RBP9.76□□□□□ -0.85
SDF2-202ENST00000585428 TCRBP04435 133 aa9.76□□□□□ -0.85
SDF2-202ENST00000585428 PVALBP20472 110 aaPredicted RBP9.76□□□□□ -0.85
SDF2-202ENST00000585428 FGF7P21781 194 aa9.76□□□□□ -0.85
SDF2-202ENST00000585428 ZNF138P52744 262 aa9.76□□□□□ -0.85
SDF2-202ENST00000585428 HBG1P69891 147 aa9.76□□□□□ -0.85
SDF2-202ENST00000585428 HBG2P69892 147 aa9.76□□□□□ -0.85
SDF2-202ENST00000585428 WFDC10BQ8IUB3 73 aa9.76□□□□□ -0.85
SDF2-202ENST00000585428 ZNF479Q96JC4 524 aa9.76□□□□□ -0.85
SDF2-202ENST00000585428 TRGV4A0A0C4DH28 118 aa9.75□□□□□ -0.85
SDF2-202ENST00000585428 GHRHP01286 108 aa9.75□□□□□ -0.85
SDF2-202ENST00000585428 SFTA3P0C7M3 94 aa9.75□□□□□ -0.85
SDF2-202ENST00000585428 EVI2AP22794 236 aa9.75□□□□□ -0.85
SDF2-202ENST00000585428 RAB32Q13637 225 aa9.75□□□□□ -0.85
SDF2-202ENST00000585428 MIR17HGQ75NE6 70 aa9.75□□□□□ -0.85
SDF2-202ENST00000585428 OR10G4Q8NGN3 311 aa9.75□□□□□ -0.85
SDF2-202ENST00000585428 ARPC5LQ9BPX5 153 aa9.75□□□□□ -0.85
SDF2-202ENST00000585428 SEC22CQ9BRL7 303 aa9.75□□□□□ -0.85
SDF2-202ENST00000585428 NPCDR1Q9BY65 106 aa9.75□□□□□ -0.85
SDF2-202ENST00000585428 OR51M1Q9H341 326 aa9.75□□□□□ -0.85
SDF2-202ENST00000585428 ZNF415Q09FC8 603 aa9.74□□□□□ -0.85
SDF2-202ENST00000585428 ZNF266Q14584 549 aa9.74□□□□□ -0.85
SDF2-202ENST00000585428 STX12Q86Y82 276 aa9.74□□□□□ -0.85
SDF2-202ENST00000585428 FXYD5Q96DB9 178 aa9.74□□□□□ -0.85
SDF2-202ENST00000585428 SPXQ9BT56 116 aa9.74□□□□□ -0.85
SDF2-202ENST00000585428 GPN1Q9HCN4 374 aaPredicted RBP9.74□□□□□ -0.85
SDF2-202ENST00000585428 TRAV6A0A075B6T7 132 aa9.73□□□□□ -0.85
SDF2-202ENST00000585428 RBAKDNA6NC62 111 aa9.73□□□□□ -0.85
SDF2-202ENST00000585428 LRCOL1A6NCL2 159 aa9.73□□□□□ -0.85
SDF2-202ENST00000585428 LYRM1O43325 122 aa9.73□□□□□ -0.85
SDF2-202ENST00000585428 ORM1P02763 201 aa9.73□□□□□ -0.85
SDF2-202ENST00000585428 GYPEP15421 78 aa9.73□□□□□ -0.85
SDF2-202ENST00000585428 SRIP30626 198 aa9.73□□□□□ -0.85
SDF2-202ENST00000585428 NHLH2Q02577 135 aa9.73□□□□□ -0.85
SDF2-202ENST00000585428 MYCBP2O75592 4640 aa9.73□□□□□ -0.85
SDF2-202ENST00000585428 FAM229AH3BQW9 127 aa9.72□□□□□ -0.85
SDF2-202ENST00000585428 S100A10P60903 97 aa9.72□□□□□ -0.85
SDF2-202ENST00000585428 MUC21Q5SSG8 566 aa9.72□□□□□ -0.85
SDF2-202ENST00000585428 Q6AWC8 147 aa9.72□□□□□ -0.85
SDF2-202ENST00000585428 Q8TAT8 98 aa9.72□□□□□ -0.85
SDF2-202ENST00000585428 NUDT15Q9NV35 164 aa9.72□□□□□ -0.85
SDF2-202ENST00000585428 CRYGDP07320 174 aa9.71□□□□□ -0.86
SDF2-202ENST00000585428 OR10J4P0C629 311 aa9.71□□□□□ -0.86
SDF2-202ENST00000585428 C10orf126Q8N4M7 172 aa9.71□□□□□ -0.86
SDF2-202ENST00000585428 THAP6Q8TBB0 222 aa9.71□□□□□ -0.86
SDF2-202ENST00000585428 PHYHIPLQ96FC7 376 aa9.71□□□□□ -0.86
SDF2-202ENST00000585428 TXNDC17Q9BRA2 123 aa9.71□□□□□ -0.86
SDF2-202ENST00000585428 PAXXQ9BUH6 204 aa9.71□□□□□ -0.86
SDF2-202ENST00000585428 LENEPQ9Y5L5 61 aa9.71□□□□□ -0.86
SDF2-202ENST00000585428 DMBT1Q9UGM3 2413 aaPredicted RBP9.71□□□□□ -0.86
SDF2-202ENST00000585428 TIRAPP58753 221 aa9.7□□□□□ -0.86
SDF2-202ENST00000585428 RANP62826 216 aaKnown RBP9.7□□□□□ -0.86
SDF2-202ENST00000585428 TMEM183BQ1AE95 376 aa9.7□□□□□ -0.86
SDF2-202ENST00000585428 TDRG1Q3Y452 100 aa9.7□□□□□ -0.86
SDF2-202ENST00000585428 TMEM183AQ8IXX5 376 aa9.7□□□□□ -0.86
SDF2-202ENST00000585428 PCNPQ8WW12 178 aaKnown RBP9.7□□□□□ -0.86
SDF2-202ENST00000585428 TMEM70Q9BUB7 260 aa9.7□□□□□ -0.86
SDF2-202ENST00000585428 TRAV4A0A0B4J268 109 aa9.69□□□□□ -0.86
SDF2-202ENST00000585428 C9JCJ5 164 aa9.69□□□□□ -0.86
SDF2-202ENST00000585428 GNRH2O43555 120 aa9.69□□□□□ -0.86
SDF2-202ENST00000585428 H2AFB2P0C5Z0 115 aa9.69□□□□□ -0.86
SDF2-202ENST00000585428 CSN1S1P47710 185 aa9.69□□□□□ -0.86
SDF2-202ENST00000585428 FAM159AQ6UWV7 190 aa9.69□□□□□ -0.86
SDF2-202ENST00000585428 SH2D6Q7Z4S9 175 aa9.69□□□□□ -0.86
SDF2-202ENST00000585428 OR5C1Q8NGR4 320 aa9.69□□□□□ -0.86
SDF2-202ENST00000585428 NTN5Q8WTR8 489 aaPredicted RBP9.69□□□□□ -0.86
SDF2-202ENST00000585428 TRGV11A0A075B6L2 103 aa9.68□□□□□ -0.86
SDF2-202ENST00000585428 IGLV5-52A0A0A0MRZ9 124 aa9.68□□□□□ -0.86
SDF2-202ENST00000585428 IGHV3-38A0A0C4DH36 116 aa9.68□□□□□ -0.86
SDF2-202ENST00000585428 LOC100131303A0A0U1RQF7 123 aa9.68□□□□□ -0.86
SDF2-202ENST00000585428 IBA57-AS1B1ANH7 110 aa9.68□□□□□ -0.86
SDF2-202ENST00000585428 DIRC3C9JPN6 131 aa9.68□□□□□ -0.86
SDF2-202ENST00000585428 HAMPP81172 84 aa9.68□□□□□ -0.86
SDF2-202ENST00000585428 OR4C5Q8NGB2 326 aa9.68□□□□□ -0.86
SDF2-202ENST00000585428 TMED6Q8WW62 240 aa9.68□□□□□ -0.86
SDF2-202ENST00000585428 WDR61Q9GZS3 305 aaKnown RBP9.68□□□□□ -0.86
SDF2-202ENST00000585428 SLC25A31Q9H0C2 315 aa9.68□□□□□ -0.86
SDF2-202ENST00000585428 FAM30AQ9NZY2 134 aa9.68□□□□□ -0.86
SDF2-202ENST00000585428 IGHV3-16A0A0C4DH30 117 aa9.67□□□□□ -0.86
SDF2-202ENST00000585428 M0R2P5 195 aa9.67□□□□□ -0.86
SDF2-202ENST00000585428 LINC01556Q5JQF7 62 aa9.67□□□□□ -0.86
SDF2-202ENST00000585428 OR7C2O60412 319 aa9.66□□□□□ -0.86
SDF2-202ENST00000585428 GATA1P15976 413 aaPredicted RBP9.66□□□□□ -0.86
SDF2-202ENST00000585428 Q6ZSN1 163 aa9.66□□□□□ -0.86
SDF2-202ENST00000585428 Q8N814 137 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms