RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 S100A8P05109 93 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 HIST1H2BJP06899 126 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 HIST1H2BOP23527 126 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 HIST1H2BBP33778 126 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 HIST1H2BDP58876 126 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 SNRPD3P62318 126 aaKnown RBP7.84□□□□□ -1.15
LIG3-203ENST00000585370 HIST1H2BCP62807 126 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 FABP9Q0Z7S8 132 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 HIST2H2BEQ16778 126 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 KHDC1LQ5JSQ8 128 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.84□□□□□ -1.15
LIG3-203ENST00000585370 FRZBQ92765 325 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 HIST1H2BHQ93079 126 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 C8orf49Q96NF6 230 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 NEU1Q99519 415 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 HIST1H2BNQ99877 126 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 HIST1H2BMQ99879 126 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 RNF114Q9Y508 228 aa7.84□□□□□ -1.15
LIG3-203ENST00000585370 UBE2CO00762 179 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 SH2D1AO60880 128 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 HOXA5P20719 270 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 CRIP1P50238 77 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 TCL1AP56279 114 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 NDUFA6P56556 154 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 PROK1P58294 105 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 SNRPEP62304 92 aaKnown RBP7.83□□□□□ -1.16
LIG3-203ENST00000585370 ERCC8Q13216 396 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 OR9G4Q8NGQ1 327 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 DCANP1Q8TF63 244 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 BORCS7Q96B45 105 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 C20orf173Q96LM9 149 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 MS4A6AQ9H2W1 248 aa7.83□□□□□ -1.16
LIG3-203ENST00000585370 SNURFLB1AK76 121 aa7.82□□□□□ -1.16
LIG3-203ENST00000585370 K7EQG2 157 aa7.82□□□□□ -1.16
LIG3-203ENST00000585370 CA1P00915 261 aaPredicted RBP7.82□□□□□ -1.16
LIG3-203ENST00000585370 SLURP1P55000 103 aa7.82□□□□□ -1.16
LIG3-203ENST00000585370 RIGQ13278 110 aa7.82□□□□□ -1.16
LIG3-203ENST00000585370 COA6Q5JTJ3 125 aaKnown RBP7.82□□□□□ -1.16
LIG3-203ENST00000585370 OR8A1Q8NGG7 326 aa7.82□□□□□ -1.16
LIG3-203ENST00000585370 MRPL18Q9H0U6 180 aaKnown RBP7.82□□□□□ -1.16
LIG3-203ENST00000585370 SIGLEC8Q9NYZ4 499 aa7.82□□□□□ -1.16
LIG3-203ENST00000585370 TRAV25A0A0B4J276 109 aa7.81□□□□□ -1.16
LIG3-203ENST00000585370 CCL24O00175 119 aa7.81□□□□□ -1.16
LIG3-203ENST00000585370 DUSP14O95147 198 aaKnown RBP7.81□□□□□ -1.16
LIG3-203ENST00000585370 CD28P10747 220 aa7.81□□□□□ -1.16
LIG3-203ENST00000585370 HBBP68871 147 aa7.81□□□□□ -1.16
LIG3-203ENST00000585370 FHL3Q13643 280 aa7.81□□□□□ -1.16
LIG3-203ENST00000585370 LINC01559Q495D7 138 aa7.81□□□□□ -1.16
LIG3-203ENST00000585370 MRPL54Q6P161 138 aaKnown RBP7.81□□□□□ -1.16
LIG3-203ENST00000585370 TMEM136Q6ZRR5 245 aa7.81□□□□□ -1.16
LIG3-203ENST00000585370 Q8TAT8 98 aa7.81□□□□□ -1.16
LIG3-203ENST00000585370 GTSF1Q8WW33 167 aa7.81□□□□□ -1.16
LIG3-203ENST00000585370 ODF3Q96PU9 254 aa7.81□□□□□ -1.16
LIG3-203ENST00000585370 NOTCH3Q9UM47 2321 aa7.81□□□□□ -1.16
LIG3-203ENST00000585370 A0A1B0GUT8 65 aa7.8□□□□□ -1.16
LIG3-203ENST00000585370 A0A1B0GXF2 115 aa7.8□□□□□ -1.16
LIG3-203ENST00000585370 F2Z2F3 143 aa7.8□□□□□ -1.16
LIG3-203ENST00000585370 APCSP02743 223 aa7.8□□□□□ -1.16
LIG3-203ENST00000585370 CSN3P07498 182 aa7.8□□□□□ -1.16
LIG3-203ENST00000585370 CRISP2P16562 243 aa7.8□□□□□ -1.16
LIG3-203ENST00000585370 RAB4BP61018 213 aa7.8□□□□□ -1.16
LIG3-203ENST00000585370 C18orf65Q6ZTR6 163 aa7.8□□□□□ -1.16
LIG3-203ENST00000585370 WFDC3Q8IUB2 231 aa7.8□□□□□ -1.16
LIG3-203ENST00000585370 DLX4Q92988 240 aaPredicted RBP7.8□□□□□ -1.16
LIG3-203ENST00000585370 PGLYRP4Q96LB8 373 aa7.8□□□□□ -1.16
LIG3-203ENST00000585370 GPR61Q9BZJ8 451 aa7.8□□□□□ -1.16
LIG3-203ENST00000585370 IGKV3-7A0A075B6H7 116 aa7.79□□□□□ -1.16
LIG3-203ENST00000585370 TRAV21A0A0B4J279 112 aa7.79□□□□□ -1.16
LIG3-203ENST00000585370 SPINK4O60575 86 aa7.79□□□□□ -1.16
LIG3-203ENST00000585370 ORM1P02763 201 aa7.79□□□□□ -1.16
LIG3-203ENST00000585370 ZNF80P51504 273 aaPredicted RBP7.79□□□□□ -1.16
LIG3-203ENST00000585370 CMC4P56277 68 aaPredicted RBP7.79□□□□□ -1.16
LIG3-203ENST00000585370 Q0VG73 95 aa7.79□□□□□ -1.16
LIG3-203ENST00000585370 DEFB136Q30KP8 78 aa7.79□□□□□ -1.16
LIG3-203ENST00000585370 EBLN2Q6P2I7 272 aa7.79□□□□□ -1.16
LIG3-203ENST00000585370 APRG1Q8IVJ8 170 aa7.79□□□□□ -1.16
LIG3-203ENST00000585370 DYNLRB2Q8TF09 96 aa7.79□□□□□ -1.16
LIG3-203ENST00000585370 RAX2Q96IS3 184 aa7.79□□□□□ -1.16
LIG3-203ENST00000585370 FAM19A4Q96LR4 140 aa7.79□□□□□ -1.16
LIG3-203ENST00000585370 CITED2Q99967 270 aaPredicted RBP7.79□□□□□ -1.16
LIG3-203ENST00000585370 DNAH3Q8TD57 4116 aa7.78□□□□□ -1.16
LIG3-203ENST00000585370 GPX1P07203 203 aa7.78□□□□□ -1.16
LIG3-203ENST00000585370 EDN2P20800 178 aa7.78□□□□□ -1.16
LIG3-203ENST00000585370 TSPOP30536 169 aa7.78□□□□□ -1.16
LIG3-203ENST00000585370 LEPP41159 167 aa7.78□□□□□ -1.16
LIG3-203ENST00000585370 DEFB114Q30KQ6 69 aa7.78□□□□□ -1.16
LIG3-203ENST00000585370 ADAMTSL5Q6ZMM2 481 aa7.78□□□□□ -1.16
LIG3-203ENST00000585370 NDUFA11Q86Y39 141 aa7.78□□□□□ -1.16
LIG3-203ENST00000585370 GATD1Q8NB37 220 aa7.78□□□□□ -1.16
LIG3-203ENST00000585370 A0A0J9YX75 114 aa7.77□□□□□ -1.17
LIG3-203ENST00000585370 IGLC6P0CF74 106 aa7.77□□□□□ -1.17
LIG3-203ENST00000585370 S100A2P29034 98 aa7.77□□□□□ -1.17
LIG3-203ENST00000585370 CTRLP40313 264 aa7.77□□□□□ -1.17
LIG3-203ENST00000585370 CAMPP49913 170 aa7.77□□□□□ -1.17
LIG3-203ENST00000585370 OR10J3Q5JRS4 329 aa7.77□□□□□ -1.17
LIG3-203ENST00000585370 PSMG4Q5JS54 123 aa7.77□□□□□ -1.17
LIG3-203ENST00000585370 LYZL1Q6UWQ5 148 aa7.77□□□□□ -1.17
LIG3-203ENST00000585370 FOXI2Q6ZQN5 318 aa7.77□□□□□ -1.17
LIG3-203ENST00000585370 ZFAND2AQ8N6M9 145 aa7.77□□□□□ -1.17
LIG3-203ENST00000585370 FER1L6-AS1Q8NA97 138 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms