RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 Q8TAT8 98 aa6.11□□□□□ -1.43
ERBB2-216ENST00000584014 RXFP4Q8TDU9 374 aa6.11□□□□□ -1.43
ERBB2-216ENST00000584014 PCNPQ8WW12 178 aaKnown RBP6.11□□□□□ -1.43
ERBB2-216ENST00000584014 MRPL53Q96EL3 112 aaKnown RBP6.11□□□□□ -1.43
ERBB2-216ENST00000584014 RARRES2Q99969 163 aa6.11□□□□□ -1.43
ERBB2-216ENST00000584014 C1QTNF4Q9BXJ3 329 aa6.11□□□□□ -1.43
ERBB2-216ENST00000584014 U3KQK5 164 aa6.11□□□□□ -1.43
ERBB2-216ENST00000584014 TGP01266 2768 aa6.11□□□□□ -1.43
ERBB2-216ENST00000584014 COL7A1Q02388 2944 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 TRAV8-1A0A0A6YYK1 113 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 DIRC3C9JPN6 131 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 DEFB4AO15263 64 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 HBE1P02100 147 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 GPX1P07203 203 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 TSPOP30536 169 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 RNASE4P34096 147 aaKnown RBP6.1□□□□□ -1.43
ERBB2-216ENST00000584014 LEPP41159 167 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 Q6ZWC4 215 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 PRNTQ86SH4 94 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 MBD3L1Q8WWY6 194 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 LINC01587Q99440 93 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 TM2D3Q9BRN9 247 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 OVOL2Q9BRP0 275 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 AGPAT4-IT1Q9H0P7 198 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 CDIP1Q9H305 208 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 GOLT1BQ9Y3E0 138 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 TNFRSF18Q9Y5U5 241 aa6.1□□□□□ -1.43
ERBB2-216ENST00000584014 TRAV12-3A0A0B4J271 114 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 A0A1W2PRE2 83 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 FAM74A7A6NL05 159 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 GGTLC3B5MD39 225 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 NPIPB6E9PJ23 425 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 INSP01308 110 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 GIG44P09565 113 aaPredicted RBP6.09□□□□□ -1.43
ERBB2-216ENST00000584014 ATP5G3P48201 142 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 ZNF138P52744 262 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 EMP1P54849 157 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 BLOC1S1P78537 153 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 KIR3DS1Q14943 382 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 C5orf17Q8NAS9 161 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 RNF183Q96D59 192 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 LINC00477Q96M19 166 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 EPDR1Q9UM22 224 aa6.09□□□□□ -1.43
ERBB2-216ENST00000584014 TRAV26-1A0A087WT03 109 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 ZNF705GA8MUZ8 300 aaPredicted RBP6.08□□□□□ -1.44
ERBB2-216ENST00000584014 F6UZH7 168 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 PEX7O00628 323 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 IFNA1P01562 189 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 AMBPP02760 352 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 TCRAP04437 139 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 PRM2P04554 102 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 BTN1A1Q13410 526 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 AMTNQ6UX39 209 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 C9orf47Q6ZRZ4 202 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 LINC00528Q8N1L1 170 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 CYB561D1Q8N8Q1 229 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 IGF2BP2-AS1Q96M15 143 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 LINC00479Q96M42 142 aa6.08□□□□□ -1.44
ERBB2-216ENST00000584014 A0A0J9YWU9 116 aa6.07□□□□□ -1.44
ERBB2-216ENST00000584014 C11orf94C9JXX5 98 aa6.07□□□□□ -1.44
ERBB2-216ENST00000584014 AKR1C3P42330 323 aa6.07□□□□□ -1.44
ERBB2-216ENST00000584014 UBE2G1P62253 170 aa6.07□□□□□ -1.44
ERBB2-216ENST00000584014 FLI1Q01543 452 aaPredicted RBP6.07□□□□□ -1.44
ERBB2-216ENST00000584014 GFI1BQ5VTD9 330 aa6.07□□□□□ -1.44
ERBB2-216ENST00000584014 TEX261Q6UWH6 196 aa6.07□□□□□ -1.44
ERBB2-216ENST00000584014 NIPSNAP3BQ9BS92 247 aa6.07□□□□□ -1.44
ERBB2-216ENST00000584014 ATG101Q9BSB4 218 aa6.07□□□□□ -1.44
ERBB2-216ENST00000584014 NDFIP1Q9BT67 221 aa6.07□□□□□ -1.44
ERBB2-216ENST00000584014 NKX6-2Q9C056 277 aaPredicted RBP6.07□□□□□ -1.44
ERBB2-216ENST00000584014 MANBALQ9NQG1 85 aa6.07□□□□□ -1.44
ERBB2-216ENST00000584014 ZNF492Q9P255 531 aa6.07□□□□□ -1.44
ERBB2-216ENST00000584014 PSG8Q9UQ74 426 aa6.07□□□□□ -1.44
ERBB2-216ENST00000584014 IGHV4-28A0A0C4DH34 117 aa6.06□□□□□ -1.44
ERBB2-216ENST00000584014 SCO2A0A1W2PP80 73 aa6.06□□□□□ -1.44
ERBB2-216ENST00000584014 C7orf71A4D174 169 aa6.06□□□□□ -1.44
ERBB2-216ENST00000584014 RBAKDNA6NC62 111 aa6.06□□□□□ -1.44
ERBB2-216ENST00000584014 FBLL1A6NHQ2 334 aaKnown RBP6.06□□□□□ -1.44
ERBB2-216ENST00000584014 CRXO43186 299 aaPredicted RBP6.06□□□□□ -1.44
ERBB2-216ENST00000584014 VPREB1P12018 145 aa6.06□□□□□ -1.44
ERBB2-216ENST00000584014 RNF151Q2KHN1 245 aa6.06□□□□□ -1.44
ERBB2-216ENST00000584014 MUC21Q5SSG8 566 aa6.06□□□□□ -1.44
ERBB2-216ENST00000584014 C1orf158Q8N1D5 194 aa6.06□□□□□ -1.44
ERBB2-216ENST00000584014 CSNK1G2-AS1Q8NCQ2 148 aa6.06□□□□□ -1.44
ERBB2-216ENST00000584014 C8orf49Q96NF6 230 aa6.06□□□□□ -1.44
ERBB2-216ENST00000584014 EIF5A2Q9GZV4 153 aaKnown RBP6.06□□□□□ -1.44
ERBB2-216ENST00000584014 TP53TG1Q9Y2A0 90 aa6.06□□□□□ -1.44
ERBB2-216ENST00000584014 TRAV1-1A0A0B4J248 108 aa6.05□□□□□ -1.44
ERBB2-216ENST00000584014 A8MTW9 85 aa6.05□□□□□ -1.44
ERBB2-216ENST00000584014 RBMY1A1P0DJD3 496 aaKnown RBP6.05□□□□□ -1.44
ERBB2-216ENST00000584014 RBMY1CP0DJD4 496 aa6.05□□□□□ -1.44
ERBB2-216ENST00000584014 RBMY1FQ15415 496 aaKnown RBP6.05□□□□□ -1.44
ERBB2-216ENST00000584014 RRN3P1Q2M238 152 aa6.05□□□□□ -1.44
ERBB2-216ENST00000584014 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
ERBB2-216ENST00000584014 PRR9Q5T870 116 aa6.05□□□□□ -1.44
ERBB2-216ENST00000584014 Q6ZQT7 251 aa6.05□□□□□ -1.44
ERBB2-216ENST00000584014 HIST1H2BAQ96A08 127 aa6.05□□□□□ -1.44
ERBB2-216ENST00000584014 MED9Q9NWA0 146 aa6.05□□□□□ -1.44
ERBB2-216ENST00000584014 X6R8D5 127 aa6.05□□□□□ -1.44
ERBB2-216ENST00000584014 TENM3Q9P273 2699 aa6.04□□□□□ -1.44
ERBB2-216ENST00000584014 RBFOX3A6NFN3 312 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms