RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 SURF2Q15527 256 aaPredicted RBP3.66□□□□□ -1.82
VAPA-207ENST00000583879 STEAP1BQ6NZ63 245 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 UQCC3Q6UW78 93 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 RNF182Q8N6D2 247 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 LINC00612Q8N6U2 182 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 OR10J6PQ8NGY7 276 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 C15orf40Q8WUR7 153 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 SFRP2Q96HF1 295 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 GPR82Q96P67 336 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 SDHCQ99643 169 aaPredicted RBP3.66□□□□□ -1.82
VAPA-207ENST00000583879 SLC25A39Q9BZJ4 359 aaPredicted RBP3.66□□□□□ -1.82
VAPA-207ENST00000583879 MRPS16Q9Y3D3 137 aaKnown RBP3.66□□□□□ -1.82
VAPA-207ENST00000583879 ALG5Q9Y673 324 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 V9GYY9 64 aa3.66□□□□□ -1.82
VAPA-207ENST00000583879 DIRC3C9JPN6 131 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 K7EP13 123 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 PPP1R2P9O14990 202 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 TSPAN13O95857 204 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 SMR3BP02814 79 aaPredicted RBP3.65□□□□□ -1.83
VAPA-207ENST00000583879 ORM2P19652 201 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 NCS1P62166 190 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 HIST1H1AQ02539 215 aaPredicted RBP3.65□□□□□ -1.83
VAPA-207ENST00000583879 LYZL2Q7Z4W2 148 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 THAP8Q8NA92 274 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 OR8A1Q8NGG7 326 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 TMEM263Q8WUH6 116 aaKnown RBP3.65□□□□□ -1.83
VAPA-207ENST00000583879 ISOC2Q96AB3 205 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 GSKIPQ9P0R6 139 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 MDFICQ9P1T7 246 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 FAT1Q14517 4588 aa3.65□□□□□ -1.83
VAPA-207ENST00000583879 A0A0B4J2A0 478 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 GAGE12BA1L429 117 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 C9orf170A2RU37 121 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 PRSS46E5RG02 174 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 H7BYZ3 331 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 DLEU1O43261 78 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 PITX3O75364 302 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 GAGE7O76087 117 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 GAGE12FP0CL80 117 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 GAGE12GP0CL81 117 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 GAGE12IP0CL82 117 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 AKR1C4P17516 323 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 RPL7P18124 248 aaKnown RBP3.64□□□□□ -1.83
VAPA-207ENST00000583879 CXCL3P19876 107 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 GATA2P23769 480 aaPredicted RBP3.64□□□□□ -1.83
VAPA-207ENST00000583879 CAV2P51636 162 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 KRTAP10-1P60331 282 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 ERVFC1-1P60608 527 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 NHLH2Q02577 135 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 SSBP1Q04837 148 aaKnown RBP3.64□□□□□ -1.83
VAPA-207ENST00000583879 FAAP20Q6NZ36 180 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 OR1S1Q8NH92 325 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 VSIG2Q96IQ7 327 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 C18orf15Q96N68 181 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 C20orf144Q9BQM9 153 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 TMEM147Q9BVK8 224 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 FUNDC2Q9BWH2 189 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 SHPKQ9UHJ6 478 aa3.64□□□□□ -1.83
VAPA-207ENST00000583879 A0A087WTM6 91 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 A0A096LPF7 62 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 PIGBOS1A0A0B4J2F0 54 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 SNURFLB1AK76 121 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 ATP6V1G2O95670 118 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 RLN2P04090 185 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 RAB2AP61019 212 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 MRPS10P82664 201 aaKnown RBP3.63□□□□□ -1.83
VAPA-207ENST00000583879 DAZ2Q13117 558 aaKnown RBP3.63□□□□□ -1.83
VAPA-207ENST00000583879 NFE4Q86UQ8 179 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 OR51S1Q8NGJ8 323 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 RPUSD4Q96CM3 377 aaKnown RBP3.63□□□□□ -1.83
VAPA-207ENST00000583879 SCGB3A2Q96PL1 93 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 SHANK2-AS3Q9BTD1 123 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 ARV1Q9H2C2 271 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 SPANXA1Q9NS26 97 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 HSPB11Q9Y547 144 aa3.63□□□□□ -1.83
VAPA-207ENST00000583879 TRAV9-2A0A087WT02 112 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 A0A087WXM4 84 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 GAGE12HA6NDE8 117 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 H3BRN7 92 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 H3BTX0 84 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 HYPMO75409 117 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 IL5P05113 134 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 OR5G3P0C626 314 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 AKAIN1P0CW23 69 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 PRB4P10163 310 aaPredicted RBP3.62□□□□□ -1.83
VAPA-207ENST00000583879 IAPPP10997 89 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 SLC25A6P12236 298 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 SNRPEP62304 92 aaKnown RBP3.62□□□□□ -1.83
VAPA-207ENST00000583879 SRPXP78539 464 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 LYPD5Q6UWN5 251 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 CYP2G1PQ6ZSU1 146 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 CCDC190Q86UF4 302 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 MRPL53Q96EL3 112 aaKnown RBP3.62□□□□□ -1.83
VAPA-207ENST00000583879 CIB3Q96Q77 187 aaPredicted RBP3.62□□□□□ -1.83
VAPA-207ENST00000583879 GGACTQ9BVM4 153 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 ZNF331Q9NQX6 463 aaPredicted RBP3.62□□□□□ -1.83
VAPA-207ENST00000583879 SPANXB1Q9NS25 103 aaPredicted RBP3.62□□□□□ -1.83
VAPA-207ENST00000583879 SCP2D1Q9UJQ7 156 aa3.62□□□□□ -1.83
VAPA-207ENST00000583879 HIGD1AQ9Y241 93 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms