RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 SPINK13Q1W4C9 94 aa9.97□□□□□ -0.81
ITGB4-209ENST00000583327 Q6AWC8 147 aa9.97□□□□□ -0.81
ITGB4-209ENST00000583327 SMIM7Q9BQ49 75 aa9.97□□□□□ -0.81
ITGB4-209ENST00000583327 SDF2L1Q9HCN8 221 aa9.97□□□□□ -0.81
ITGB4-209ENST00000583327 AGRNO00468 2067 aa9.97□□□□□ -0.81
ITGB4-209ENST00000583327 PGPEP1LA6NFU8 196 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 K7EN84 100 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 UBE2CO00762 179 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 GCGP01275 180 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 FRMD6-AS1P0C7T7 363 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 CEBPGP53567 150 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 FXYD7P58549 80 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 TMEM241Q24JQ0 296 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 ZNF674Q2M3X9 581 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 SMUG1Q53HV7 270 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 ZC2HC1AQ96GY0 325 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 C20orf144Q9BQM9 153 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 NDFIP1Q9BT67 221 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 SEC11CQ9BY50 192 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 MGAM2Q2M2H8 2515 aa9.96□□□□□ -0.82
ITGB4-209ENST00000583327 C7orf71A4D174 169 aa9.95□□□□□ -0.82
ITGB4-209ENST00000583327 GPX1P07203 203 aa9.95□□□□□ -0.82
ITGB4-209ENST00000583327 RBMY1A1P0DJD3 496 aaKnown RBP9.95□□□□□ -0.82
ITGB4-209ENST00000583327 RBMY1CP0DJD4 496 aa9.95□□□□□ -0.82
ITGB4-209ENST00000583327 APOC4P55056 127 aa9.95□□□□□ -0.82
ITGB4-209ENST00000583327 RBMY1FQ15415 496 aaKnown RBP9.95□□□□□ -0.82
ITGB4-209ENST00000583327 GFI1BQ5VTD9 330 aa9.95□□□□□ -0.82
ITGB4-209ENST00000583327 LINC01551Q86U37 167 aa9.95□□□□□ -0.82
ITGB4-209ENST00000583327 ZNF575Q86XF7 245 aa9.95□□□□□ -0.82
ITGB4-209ENST00000583327 C1orf158Q8N1D5 194 aa9.95□□□□□ -0.82
ITGB4-209ENST00000583327 C1QTNF4Q9BXJ3 329 aa9.95□□□□□ -0.82
ITGB4-209ENST00000583327 NAT8Q9UHE5 227 aa9.95□□□□□ -0.82
ITGB4-209ENST00000583327 NBEAL1Q6ZS30 2694 aa9.95□□□□□ -0.82
ITGB4-209ENST00000583327 TRAV12-2A0A075B6T6 113 aa9.94□□□□□ -0.82
ITGB4-209ENST00000583327 C19orf71A6NCJ1 209 aa9.94□□□□□ -0.82
ITGB4-209ENST00000583327 RPL23P62829 140 aaKnown RBP9.94□□□□□ -0.82
ITGB4-209ENST00000583327 BTN1A1Q13410 526 aa9.94□□□□□ -0.82
ITGB4-209ENST00000583327 Q6ZQT7 251 aa9.94□□□□□ -0.82
ITGB4-209ENST00000583327 Q6ZWC4 215 aa9.94□□□□□ -0.82
ITGB4-209ENST00000583327 LINC00467Q9BRT7 94 aa9.94□□□□□ -0.82
ITGB4-209ENST00000583327 XCL2Q9UBD3 114 aa9.94□□□□□ -0.82
ITGB4-209ENST00000583327 CARHSP1Q9Y2V2 147 aaKnown RBP9.94□□□□□ -0.82
ITGB4-209ENST00000583327 FABP5P3A8MUU1 101 aa9.93□□□□□ -0.82
ITGB4-209ENST00000583327 PFN1P07737 140 aaKnown RBP9.93□□□□□ -0.82
ITGB4-209ENST00000583327 RNASE4P34096 147 aaKnown RBP9.93□□□□□ -0.82
ITGB4-209ENST00000583327 ZNF705AQ6ZN79 300 aaPredicted RBP9.93□□□□□ -0.82
ITGB4-209ENST00000583327 NHLRC2Q8NBF2 726 aa9.93□□□□□ -0.82
ITGB4-209ENST00000583327 C11orf21Q9P2W6 132 aa9.93□□□□□ -0.82
ITGB4-209ENST00000583327 TRAV12-3A0A0B4J271 114 aa9.92□□□□□ -0.82
ITGB4-209ENST00000583327 TRAV21A0A0B4J279 112 aa9.92□□□□□ -0.82
ITGB4-209ENST00000583327 KRBOX1C9JBD0 128 aa9.92□□□□□ -0.82
ITGB4-209ENST00000583327 F8W036 122 aa9.92□□□□□ -0.82
ITGB4-209ENST00000583327 CA1P00915 261 aaPredicted RBP9.92□□□□□ -0.82
ITGB4-209ENST00000583327 OR5I1Q13606 314 aa9.92□□□□□ -0.82
ITGB4-209ENST00000583327 TDRG1Q3Y452 100 aa9.92□□□□□ -0.82
ITGB4-209ENST00000583327 FAM231DQ6ZW35 169 aa9.92□□□□□ -0.82
ITGB4-209ENST00000583327 NIPSNAP3BQ9BS92 247 aa9.92□□□□□ -0.82
ITGB4-209ENST00000583327 BIN3Q9NQY0 253 aa9.92□□□□□ -0.82
ITGB4-209ENST00000583327 J3KRW8 73 aa9.91□□□□□ -0.82
ITGB4-209ENST00000583327 SH2D1AO60880 128 aa9.91□□□□□ -0.82
ITGB4-209ENST00000583327 INSP01308 110 aa9.91□□□□□ -0.82
ITGB4-209ENST00000583327 PNRC1Q12796 327 aaPredicted RBP9.91□□□□□ -0.82
ITGB4-209ENST00000583327 FAM162BQ5T6X4 162 aa9.91□□□□□ -0.82
ITGB4-209ENST00000583327 TMEM256Q8N2U0 113 aa9.91□□□□□ -0.82
ITGB4-209ENST00000583327 ISOC2Q96AB3 205 aa9.91□□□□□ -0.82
ITGB4-209ENST00000583327 RNF183Q96D59 192 aa9.91□□□□□ -0.82
ITGB4-209ENST00000583327 TP53TG1Q9Y2A0 90 aa9.91□□□□□ -0.82
ITGB4-209ENST00000583327 H7BYZ3 331 aa9.9□□□□□ -0.82
ITGB4-209ENST00000583327 DEFB121Q5J5C9 76 aa9.9□□□□□ -0.82
ITGB4-209ENST00000583327 SBSPONQ8IVN8 264 aa9.9□□□□□ -0.82
ITGB4-209ENST00000583327 NUDT10Q8NFP7 164 aa9.9□□□□□ -0.82
ITGB4-209ENST00000583327 NUDT11Q96G61 164 aa9.9□□□□□ -0.82
ITGB4-209ENST00000583327 NEU1Q99519 415 aa9.9□□□□□ -0.82
ITGB4-209ENST00000583327 NOTCH1P46531 2555 aa9.89□□□□□ -0.83
ITGB4-209ENST00000583327 IGKV3D-20A0A0C4DH25 116 aa9.89□□□□□ -0.83
ITGB4-209ENST00000583327 MGST1P10620 155 aaKnown RBP9.89□□□□□ -0.83
ITGB4-209ENST00000583327 DEFA6Q01524 100 aa9.89□□□□□ -0.83
ITGB4-209ENST00000583327 LINC01559Q495D7 138 aa9.89□□□□□ -0.83
ITGB4-209ENST00000583327 TM2D3Q9BRN9 247 aa9.89□□□□□ -0.83
ITGB4-209ENST00000583327 PYGO2Q9BRQ0 406 aa9.89□□□□□ -0.83
ITGB4-209ENST00000583327 OSTCQ9NRP0 149 aa9.89□□□□□ -0.83
ITGB4-209ENST00000583327 TP53TG3Q9ULZ0 132 aa9.89□□□□□ -0.83
ITGB4-209ENST00000583327 ANXA2RQ3ZCQ2 193 aa9.88□□□□□ -0.83
ITGB4-209ENST00000583327 DNLZQ5SXM8 178 aa9.88□□□□□ -0.83
ITGB4-209ENST00000583327 MRAPQ8TCY5 172 aa9.88□□□□□ -0.83
ITGB4-209ENST00000583327 OVOL2Q9BRP0 275 aa9.88□□□□□ -0.83
ITGB4-209ENST00000583327 GOLT1BQ9Y3E0 138 aa9.88□□□□□ -0.83
ITGB4-209ENST00000583327 X6R8D5 127 aa9.88□□□□□ -0.83
ITGB4-209ENST00000583327 IGHV1OR15-1A0A075B7D0 117 aa9.87□□□□□ -0.83
ITGB4-209ENST00000583327 SMIM9A6NGZ8 99 aa9.87□□□□□ -0.83
ITGB4-209ENST00000583327 CXCL1P09341 107 aa9.87□□□□□ -0.83
ITGB4-209ENST00000583327 ADIRFQ15847 76 aa9.87□□□□□ -0.83
ITGB4-209ENST00000583327 PRR27Q6MZM9 219 aa9.87□□□□□ -0.83
ITGB4-209ENST00000583327 SFRP2Q96HF1 295 aa9.87□□□□□ -0.83
ITGB4-209ENST00000583327 RCHY1Q96PM5 261 aa9.87□□□□□ -0.83
ITGB4-209ENST00000583327 LINC01587Q99440 93 aa9.87□□□□□ -0.83
ITGB4-209ENST00000583327 B9D2Q9BPU9 175 aa9.87□□□□□ -0.83
ITGB4-209ENST00000583327 RNASE7Q9H1E1 156 aaKnown RBP9.87□□□□□ -0.83
ITGB4-209ENST00000583327 B4DEV8 164 aa9.86□□□□□ -0.83
ITGB4-209ENST00000583327 SPRY2O43597 315 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms