RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 KRTAP2-4Q9BYR9 128 aa0.53□□□□□ -2.32
SMARCE1-219ENST00000583294 KRTAP2-1Q9BYU5 128 aa0.53□□□□□ -2.32
SMARCE1-219ENST00000583294 H3BMG7 143 aa0.52□□□□□ -2.33
SMARCE1-219ENST00000583294 GYPBP06028 91 aa0.52□□□□□ -2.33
SMARCE1-219ENST00000583294 FABP1P07148 127 aa0.52□□□□□ -2.33
SMARCE1-219ENST00000583294 MORN4Q8NDC4 146 aa0.52□□□□□ -2.33
SMARCE1-219ENST00000583294 TSKUQ8WUA8 353 aa0.52□□□□□ -2.33
SMARCE1-219ENST00000583294 ZCCHC11Q5TAX3 1644 aaKnown RBP0.52□□□□□ -2.33
SMARCE1-219ENST00000583294 TRPM7Q96QT4 1865 aa0.52□□□□□ -2.33
SMARCE1-219ENST00000583294 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
SMARCE1-219ENST00000583294 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.51□□□□□ -2.33
SMARCE1-219ENST00000583294 PRORSD1PA6NEY8 169 aa0.51□□□□□ -2.33
SMARCE1-219ENST00000583294 FAM107AO95990 144 aa0.51□□□□□ -2.33
SMARCE1-219ENST00000583294 CRYGSP22914 178 aa0.51□□□□□ -2.33
SMARCE1-219ENST00000583294 FAM135BQ49AJ0 1406 aa0.51□□□□□ -2.33
SMARCE1-219ENST00000583294 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.51□□□□□ -2.33
SMARCE1-219ENST00000583294 SLC25A4P12235 298 aa0.5□□□□□ -2.33
SMARCE1-219ENST00000583294 RPL7P18124 248 aaKnown RBP0.5□□□□□ -2.33
SMARCE1-219ENST00000583294 POLR2HP52434 150 aaKnown RBP0.5□□□□□ -2.33
SMARCE1-219ENST00000583294 GLYATL3Q5SZD4 288 aa0.5□□□□□ -2.33
SMARCE1-219ENST00000583294 OR51A4Q8NGJ6 313 aa0.5□□□□□ -2.33
SMARCE1-219ENST00000583294 LINC00208Q96KT6 92 aa0.5□□□□□ -2.33
SMARCE1-219ENST00000583294 MPC1Q9Y5U8 109 aa0.5□□□□□ -2.33
SMARCE1-219ENST00000583294 V9GYQ6 96 aa0.5□□□□□ -2.33
SMARCE1-219ENST00000583294 FER1L6Q2WGJ9 1857 aa0.5□□□□□ -2.33
SMARCE1-219ENST00000583294 ATG2AQ2TAZ0 1938 aa0.49□□□□□ -2.33
SMARCE1-219ENST00000583294 LOC107984640A0A0U1RRK4 108 aa0.49□□□□□ -2.33
SMARCE1-219ENST00000583294 A0A1B0GV72 72 aa0.49□□□□□ -2.33
SMARCE1-219ENST00000583294 M0QZK8 103 aa0.49□□□□□ -2.33
SMARCE1-219ENST00000583294 EDF1O60869 148 aaKnown RBP0.49□□□□□ -2.33
SMARCE1-219ENST00000583294 EVI2AP22794 236 aa0.49□□□□□ -2.33
SMARCE1-219ENST00000583294 DNAJB13P59910 316 aa0.49□□□□□ -2.33
SMARCE1-219ENST00000583294 COMMD3Q9UBI1 195 aa0.49□□□□□ -2.33
SMARCE1-219ENST00000583294 TNCP24821 2201 aa0.49□□□□□ -2.33
SMARCE1-219ENST00000583294 MEGF8Q7Z7M0 2845 aa0.48□□□□□ -2.33
SMARCE1-219ENST00000583294 BDP1A6H8Y1 2624 aa0.48□□□□□ -2.33
SMARCE1-219ENST00000583294 TRBV7-6A0A0J9YX20 115 aa0.48□□□□□ -2.33
SMARCE1-219ENST00000583294 CDC42EP2O14613 210 aa0.48□□□□□ -2.33
SMARCE1-219ENST00000583294 GTF2A1P52655 376 aaPredicted RBP0.48□□□□□ -2.33
SMARCE1-219ENST00000583294 BLCAPP62952 87 aa0.48□□□□□ -2.33
SMARCE1-219ENST00000583294 FXYD3Q14802 87 aa0.48□□□□□ -2.33
SMARCE1-219ENST00000583294 C10orf99Q6UWK7 81 aa0.48□□□□□ -2.33
SMARCE1-219ENST00000583294 BRK1Q8WUW1 75 aa0.48□□□□□ -2.33
SMARCE1-219ENST00000583294 CBLN4Q9NTU7 201 aa0.48□□□□□ -2.33
SMARCE1-219ENST00000583294 MRPL36Q9P0J6 103 aaKnown RBP0.48□□□□□ -2.33
SMARCE1-219ENST00000583294 PBRM1Q86U86 1689 aa0.47□□□□□ -2.33
SMARCE1-219ENST00000583294 LOC101927531A0A1B0GV80 90 aa0.47□□□□□ -2.33
SMARCE1-219ENST00000583294 SRP9P49458 86 aaKnown RBP0.47□□□□□ -2.33
SMARCE1-219ENST00000583294 ZNF56Q15929 161 aa0.47□□□□□ -2.33
SMARCE1-219ENST00000583294 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.47□□□□□ -2.33
SMARCE1-219ENST00000583294 OR8J3Q8NGG0 315 aa0.47□□□□□ -2.33
SMARCE1-219ENST00000583294 TMEM30CPA0ZSE6 113 aa0.46□□□□□ -2.34
SMARCE1-219ENST00000583294 NEFHP12036 1026 aa0.46□□□□□ -2.34
SMARCE1-219ENST00000583294 S100A5P33763 92 aa0.46□□□□□ -2.34
SMARCE1-219ENST00000583294 MRPL35Q9NZE8 188 aaKnown RBP0.46□□□□□ -2.34
SMARCE1-219ENST00000583294 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 FAT4Q6V0I7 4981 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 NBDYA0A0U1RRE5 68 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 TMEM189A5PLL7 270 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 IFITM5A6NNB3 132 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 IFNA21P01568 189 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 IGKCP01834 107 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 IL7P13232 177 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 ETV6P41212 452 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 SPINK13Q1W4C9 94 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 CCSMST1Q4G0I0 132 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 SMIM7Q9BQ49 75 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 SMPXQ9UHP9 88 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 A2MP01023 1474 aa0.45□□□□□ -2.34
SMARCE1-219ENST00000583294 MYH1P12882 1939 aa0.44□□□□□ -2.34
SMARCE1-219ENST00000583294 FXYD1O00168 92 aa0.44□□□□□ -2.34
SMARCE1-219ENST00000583294 IGF2P01344 180 aa0.44□□□□□ -2.34
SMARCE1-219ENST00000583294 HBDP02042 147 aa0.44□□□□□ -2.34
SMARCE1-219ENST00000583294 SAMD13Q5VXD3 122 aa0.44□□□□□ -2.34
SMARCE1-219ENST00000583294 C5orf56Q8N8D9 126 aa0.44□□□□□ -2.34
SMARCE1-219ENST00000583294 IQCJQ1A5X6 159 aa0.43□□□□□ -2.34
SMARCE1-219ENST00000583294 OR9Q1Q8NGQ5 310 aa0.43□□□□□ -2.34
SMARCE1-219ENST00000583294 CCDC115Q96NT0 180 aa0.43□□□□□ -2.34
SMARCE1-219ENST00000583294 CENPHQ9H3R5 247 aa0.43□□□□□ -2.34
SMARCE1-219ENST00000583294 C19orf12Q9NSK7 152 aa0.43□□□□□ -2.34
SMARCE1-219ENST00000583294 TPST1O60507 370 aa0.42□□□□□ -2.34
SMARCE1-219ENST00000583294 LSM3P62310 102 aaKnown RBP0.42□□□□□ -2.34
SMARCE1-219ENST00000583294 TMEM128Q5BJH2 165 aa0.42□□□□□ -2.34
SMARCE1-219ENST00000583294 LYPD5Q6UWN5 251 aa0.42□□□□□ -2.34
SMARCE1-219ENST00000583294 NAT14Q8WUY8 206 aa0.42□□□□□ -2.34
SMARCE1-219ENST00000583294 AFDNP55196 1824 aaKnown RBP0.41□□□□□ -2.34
SMARCE1-219ENST00000583294 HIGD1CA8MV81 97 aa0.41□□□□□ -2.34
SMARCE1-219ENST00000583294 CKS2P33552 79 aa0.41□□□□□ -2.34
SMARCE1-219ENST00000583294 RPL22P35268 128 aaKnown RBP0.41□□□□□ -2.34
SMARCE1-219ENST00000583294 RPL37P61927 97 aaKnown RBP0.41□□□□□ -2.34
SMARCE1-219ENST00000583294 TFAMQ00059 246 aaKnown RBP0.41□□□□□ -2.34
SMARCE1-219ENST00000583294 OR5A2Q8NGI9 324 aa0.41□□□□□ -2.34
SMARCE1-219ENST00000583294 OTOSQ8NHW6 89 aa0.41□□□□□ -2.34
SMARCE1-219ENST00000583294 ESPL1Q14674 2120 aa0.4□□□□□ -2.35
SMARCE1-219ENST00000583294 SYNE1Q8NF91 8797 aaKnown RBP0.4□□□□□ -2.35
SMARCE1-219ENST00000583294 PGRMC1O00264 195 aaKnown RBP0.4□□□□□ -2.35
SMARCE1-219ENST00000583294 S100GP29377 79 aa0.4□□□□□ -2.35
SMARCE1-219ENST00000583294 TOMM20LQ6UXN7 152 aa0.4□□□□□ -2.35
SMARCE1-219ENST00000583294 IDO2Q6ZQW0 420 aa0.4□□□□□ -2.35
SMARCE1-219ENST00000583294 DEFB132Q7Z7B7 95 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms