RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ZNF324O75467 553 aaPredicted RBP17.23■□□□□ 0.35
CCDC47-204ENST00000582252 AMTP48728 403 aa17.23■□□□□ 0.35
CCDC47-204ENST00000582252 TM4SF20Q53R12 229 aa17.23■□□□□ 0.35
CCDC47-204ENST00000582252 LYZL1Q6UWQ5 148 aa17.23■□□□□ 0.35
CCDC47-204ENST00000582252 RCHY1Q96PM5 261 aa17.23■□□□□ 0.35
CCDC47-204ENST00000582252 SOCS3O14543 225 aa17.22■□□□□ 0.35
CCDC47-204ENST00000582252 ORM1P02763 201 aa17.22■□□□□ 0.35
CCDC47-204ENST00000582252 LGALS1P09382 135 aaKnown RBP17.22■□□□□ 0.35
CCDC47-204ENST00000582252 LINC01559Q495D7 138 aa17.22■□□□□ 0.35
CCDC47-204ENST00000582252 FER1L6-AS1Q8NA97 138 aa17.22■□□□□ 0.35
CCDC47-204ENST00000582252 OR10J6PQ8NGY7 276 aa17.22■□□□□ 0.35
CCDC47-204ENST00000582252 LINC00477Q96M19 166 aa17.22■□□□□ 0.35
CCDC47-204ENST00000582252 SCGB1D1O95968 90 aa17.21■□□□□ 0.35
CCDC47-204ENST00000582252 RPLP1P05386 114 aaKnown RBP17.21■□□□□ 0.35
CCDC47-204ENST00000582252 CTRLP40313 264 aa17.21■□□□□ 0.35
CCDC47-204ENST00000582252 MYOZ3Q8TDC0 251 aa17.21■□□□□ 0.35
CCDC47-204ENST00000582252 DMRTA1Q5VZB9 504 aa17.21■□□□□ 0.35
CCDC47-204ENST00000582252 ZNF493Q6ZR52 646 aa17.21■□□□□ 0.35
CCDC47-204ENST00000582252 Q8N2B8 174 aa17.21■□□□□ 0.35
CCDC47-204ENST00000582252 RNF152Q8N8N0 203 aa17.21■□□□□ 0.35
CCDC47-204ENST00000582252 UBE2E2Q96LR5 201 aa17.21■□□□□ 0.35
CCDC47-204ENST00000582252 DNAJC9-AS1A6NH13 148 aa17.2■□□□□ 0.34
CCDC47-204ENST00000582252 HSBP1O75506 76 aa17.2■□□□□ 0.34
CCDC47-204ENST00000582252 TSTD3H0UI37 97 aa17.19■□□□□ 0.34
CCDC47-204ENST00000582252 IGLC6P0CF74 106 aa17.19■□□□□ 0.34
CCDC47-204ENST00000582252 PMCHP20382 165 aa17.19■□□□□ 0.34
CCDC47-204ENST00000582252 ID1P41134 155 aa17.19■□□□□ 0.34
CCDC47-204ENST00000582252 C10orf99Q6UWK7 81 aa17.19■□□□□ 0.34
CCDC47-204ENST00000582252 ZNF418Q8TF45 676 aaPredicted RBP17.19■□□□□ 0.34
CCDC47-204ENST00000582252 C20orf173Q96LM9 149 aa17.19■□□□□ 0.34
CCDC47-204ENST00000582252 DUX5Q96PT3 197 aa17.19■□□□□ 0.34
CCDC47-204ENST00000582252 NAGKQ9UJ70 344 aa17.19■□□□□ 0.34
CCDC47-204ENST00000582252 FN1P02751 2386 aaKnown RBP17.19■□□□□ 0.34
CCDC47-204ENST00000582252 PKIAP61925 76 aa17.18■□□□□ 0.34
CCDC47-204ENST00000582252 Q6ZWC4 215 aa17.18■□□□□ 0.34
CCDC47-204ENST00000582252 REC114Q7Z4M0 266 aa17.18■□□□□ 0.34
CCDC47-204ENST00000582252 INAFM1C9JVW0 142 aa17.17■□□□□ 0.34
CCDC47-204ENST00000582252 RNASEKQ6P5S7 137 aaKnown RBP17.17■□□□□ 0.34
CCDC47-204ENST00000582252 CHCHD1Q96BP2 118 aaKnown RBP17.17■□□□□ 0.34
CCDC47-204ENST00000582252 NF1P21359 2839 aa17.17■□□□□ 0.34
CCDC47-204ENST00000582252 LGALS9O00182 355 aa17.16■□□□□ 0.34
CCDC47-204ENST00000582252 TRBV7-9A0A0J9YWB2 115 aa17.15■□□□□ 0.34
CCDC47-204ENST00000582252 NIT1Q86X76 327 aa17.15■□□□□ 0.34
CCDC47-204ENST00000582252 ESM1Q9NQ30 184 aa17.15■□□□□ 0.34
CCDC47-204ENST00000582252 MAST4O15021 2626 aa17.15■□□□□ 0.34
CCDC47-204ENST00000582252 CYSRT1A8MQ03 144 aa17.14■□□□□ 0.33
CCDC47-204ENST00000582252 ZNF705DP0CH99 300 aaPredicted RBP17.14■□□□□ 0.33
CCDC47-204ENST00000582252 ZNF705BP0CI00 300 aaPredicted RBP17.14■□□□□ 0.33
CCDC47-204ENST00000582252 NTF3P20783 257 aa17.14■□□□□ 0.33
CCDC47-204ENST00000582252 HILS1P60008 231 aa17.14■□□□□ 0.33
CCDC47-204ENST00000582252 CNFNQ9BYD5 112 aa17.14■□□□□ 0.33
CCDC47-204ENST00000582252 TMEM213A2RRL7 107 aa17.13■□□□□ 0.33
CCDC47-204ENST00000582252 RAB4AP20338 218 aa17.13■□□□□ 0.33
CCDC47-204ENST00000582252 TWIST1Q15672 202 aa17.13■□□□□ 0.33
CCDC47-204ENST00000582252 JMJD8Q96S16 334 aa17.13■□□□□ 0.33
CCDC47-204ENST00000582252 M0R2Z0 102 aa17.13■□□□□ 0.33
CCDC47-204ENST00000582252 FAM104BQ5XKR9 115 aa17.13■□□□□ 0.33
CCDC47-204ENST00000582252 OR8A1Q8NGG7 326 aa17.13■□□□□ 0.33
CCDC47-204ENST00000582252 CUBNO60494 3623 aa17.12■□□□□ 0.33
CCDC47-204ENST00000582252 IGKV3-7A0A075B6H7 116 aa17.12■□□□□ 0.33
CCDC47-204ENST00000582252 LINC00587B1AMM8 73 aa17.12■□□□□ 0.33
CCDC47-204ENST00000582252 RNASE1P07998 156 aaKnown RBP17.12■□□□□ 0.33
CCDC47-204ENST00000582252 IGHV4OR15-8A0A075B7B6 117 aa17.11■□□□□ 0.33
CCDC47-204ENST00000582252 A0A087WW49 117 aa17.11■□□□□ 0.33
CCDC47-204ENST00000582252 FAM181BA6NEQ2 426 aa17.11■□□□□ 0.33
CCDC47-204ENST00000582252 KRTDAPP60985 99 aa17.11■□□□□ 0.33
CCDC47-204ENST00000582252 FAM19A2Q8N3H0 131 aa17.11■□□□□ 0.33
CCDC47-204ENST00000582252 TRAV21A0A0B4J279 112 aa17.1■□□□□ 0.33
CCDC47-204ENST00000582252 IGKV3D-20A0A0C4DH25 116 aa17.1■□□□□ 0.33
CCDC47-204ENST00000582252 M0QZ24 198 aa17.1■□□□□ 0.33
CCDC47-204ENST00000582252 LINC00614P0C842 121 aa17.1■□□□□ 0.33
CCDC47-204ENST00000582252 PRR31Q5SQ13 230 aa17.1■□□□□ 0.33
CCDC47-204ENST00000582252 KLHDC1Q8N7A1 406 aa17.1■□□□□ 0.33
CCDC47-204ENST00000582252 TMEM191AQ9H0A3 160 aa17.1■□□□□ 0.33
CCDC47-204ENST00000582252 SYNJ2BPP57105 145 aa17.1■□□□□ 0.33
CCDC47-204ENST00000582252 DCANP1Q8TF63 244 aa17.1■□□□□ 0.33
CCDC47-204ENST00000582252 CRLF1O75462 422 aa17.09■□□□□ 0.33
CCDC47-204ENST00000582252 HOXD3P31249 432 aaPredicted RBP17.09■□□□□ 0.33
CCDC47-204ENST00000582252 ORMDL3Q8N138 153 aa17.09■□□□□ 0.33
CCDC47-204ENST00000582252 ZNF575Q86XF7 245 aa17.08■□□□□ 0.32
CCDC47-204ENST00000582252 U3KQK5 164 aa17.08■□□□□ 0.32
CCDC47-204ENST00000582252 SSTP61278 116 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 SNRPD3P62318 126 aaKnown RBP17.07■□□□□ 0.32
CCDC47-204ENST00000582252 ZNF664Q8N3J9 261 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 ZFAND2AQ8N6M9 145 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 URB1-AS1Q96HZ7 61 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 FAM19A4Q96LR4 140 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 MS4A6AQ9H2W1 248 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 PRO1933Q9H354 126 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 C11orf21Q9P2W6 132 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 EDN2P20800 178 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 CACNG7P62955 275 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 TEX43Q6ZNM6 134 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 SMIM15Q7Z3B0 74 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 APRG1Q8IVJ8 170 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 AMN1Q8IY45 258 aa17.07■□□□□ 0.32
CCDC47-204ENST00000582252 SETD2Q9BYW2 2564 aaPredicted RBP17.06■□□□□ 0.32
CCDC47-204ENST00000582252 OR5AL1P0C617 328 aa17.06■□□□□ 0.32
CCDC47-204ENST00000582252 CD33P20138 364 aa17.06■□□□□ 0.32
CCDC47-204ENST00000582252 PRELID3AQ96N28 172 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms