RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 OTOSQ8NHW6 89 aa0.49□□□□□ -2.33
TTC39C-207ENST00000581394 CIB3Q96Q77 187 aaPredicted RBP0.49□□□□□ -2.33
TTC39C-207ENST00000581394 PEAK1Q9H792 1746 aa0.49□□□□□ -2.33
TTC39C-207ENST00000581394 SNRNP200O75643 2136 aaKnown RBP0.49□□□□□ -2.33
TTC39C-207ENST00000581394 ARHGAP31Q2M1Z3 1444 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 TRAV23DV6A0A075B6W5 121 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 LOC107986453A0A1B0GWG9 222 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 K7EIL1 84 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 QRFPP83859 136 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 NEDD8Q15843 81 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 TMEM244Q5VVB8 128 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 LINC00299Q6ZSB3 139 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 KRTAP19-3Q7Z4W3 81 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 PYDC1Q8WXC3 89 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 HSPB8Q9UJY1 196 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 DNAJC15Q9Y5T4 150 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 PTPRFP10586 1907 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 FER1L6Q2WGJ9 1857 aa0.48□□□□□ -2.33
TTC39C-207ENST00000581394 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
TTC39C-207ENST00000581394 MUC5BQ9HC84 5762 aaPredicted RBP0.47□□□□□ -2.33
TTC39C-207ENST00000581394 CITO14578 2027 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 A0A096LPI6 279 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 LOC107984156A0A0G2JMH3 177 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 NBDYA0A0U1RRE5 68 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 NUPR2A6NF83 97 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 ARL5CA6NH57 179 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 DPM2O94777 84 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 CD3DP04234 171 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 RPL37AP61513 92 aaKnown RBP0.47□□□□□ -2.33
TTC39C-207ENST00000581394 CCSMST1Q4G0I0 132 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 MORN2Q502X0 79 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 LINC00575Q6W349 94 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 TMEM91Q6ZNR0 172 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 DEFB132Q7Z7B7 95 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 ARL17AQ8IVW1 177 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 OR8I2Q8N0Y5 310 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 TCTEX1D1Q8N7M0 179 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 COMMD3Q9UBI1 195 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 LAMA4Q16363 1823 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 XIRP1Q702N8 1843 aaKnown RBP0.47□□□□□ -2.33
TTC39C-207ENST00000581394 UNC13AQ9UPW8 1703 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 PTPRGP23470 1445 aa0.47□□□□□ -2.33
TTC39C-207ENST00000581394 ZFC3H1O60293 1989 aaKnown RBP0.46□□□□□ -2.34
TTC39C-207ENST00000581394 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.46□□□□□ -2.34
TTC39C-207ENST00000581394 TMEM189A5PLL7 270 aa0.46□□□□□ -2.34
TTC39C-207ENST00000581394 CDC42EP2O14613 210 aa0.46□□□□□ -2.34
TTC39C-207ENST00000581394 ASB16-AS1Q495Z4 193 aa0.46□□□□□ -2.34
TTC39C-207ENST00000581394 HSD17B12Q53GQ0 312 aa0.46□□□□□ -2.34
TTC39C-207ENST00000581394 ARHGEF10O15013 1369 aa0.45□□□□□ -2.34
TTC39C-207ENST00000581394 TANC2Q9HCD6 1990 aa0.45□□□□□ -2.34
TTC39C-207ENST00000581394 IFITM5A6NNB3 132 aa0.45□□□□□ -2.34
TTC39C-207ENST00000581394 OR2H2O95918 312 aa0.45□□□□□ -2.34
TTC39C-207ENST00000581394 IGF2P01344 180 aa0.45□□□□□ -2.34
TTC39C-207ENST00000581394 PAEPP09466 180 aa0.45□□□□□ -2.34
TTC39C-207ENST00000581394 GTF2A1P52655 376 aaPredicted RBP0.45□□□□□ -2.34
TTC39C-207ENST00000581394 DNAJB13P59910 316 aa0.45□□□□□ -2.34
TTC39C-207ENST00000581394 SNRPD3P62318 126 aaKnown RBP0.45□□□□□ -2.34
TTC39C-207ENST00000581394 TCTE3Q8IZS6 198 aa0.45□□□□□ -2.34
TTC39C-207ENST00000581394 C10orf111Q8N326 155 aa0.45□□□□□ -2.34
TTC39C-207ENST00000581394 CCL19Q99731 98 aa0.45□□□□□ -2.34
TTC39C-207ENST00000581394 METTL1Q9UBP6 276 aaKnown RBP0.45□□□□□ -2.34
TTC39C-207ENST00000581394 ZNF462Q96JM2 2506 aa0.45□□□□□ -2.34
TTC39C-207ENST00000581394 CHD3Q12873 2000 aaKnown RBP0.45□□□□□ -2.34
TTC39C-207ENST00000581394 ZDBF2Q9HCK1 2354 aa0.45□□□□□ -2.34
TTC39C-207ENST00000581394 BORCS7-ASMTA0A0B4J1R7 106 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 A0A0D9SG42 100 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 A0A1W2PPB8 328 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 A0A1W2PPM0 123 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 A0A1W2PRS3 328 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 KIR3DP1A8MWS1 328 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 EDF1O60869 148 aaKnown RBP0.44□□□□□ -2.34
TTC39C-207ENST00000581394 IGKCP01834 107 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 GYPBP06028 91 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 HLA-DRB4P13762 266 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 CMPK1P30085 196 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 AKR1D1P51857 326 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 CCDC153Q494R4 210 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 LYPD5Q6UWN5 251 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 OR4S1Q8NGB4 309 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 HLA-DRB4X5D2U9 266 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 EML5Q05BV3 1969 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 ZGRF1Q86YA3 2104 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 SYNJ1O43426 1573 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 CPDO75976 1380 aa0.44□□□□□ -2.34
TTC39C-207ENST00000581394 IGHV1-24A0A0C4DH33 117 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 LOC101927531A0A1B0GV80 90 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 PRB4P10163 310 aaPredicted RBP0.43□□□□□ -2.34
TTC39C-207ENST00000581394 CKS2P33552 79 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 ETV6P41212 452 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 PSPHP78330 225 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 HIST1H1AQ02539 215 aaPredicted RBP0.43□□□□□ -2.34
TTC39C-207ENST00000581394 GLYATL3Q5SZD4 288 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 C3orf62Q6ZUJ4 267 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 C5orf56Q8N8D9 126 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 LINC00208Q96KT6 92 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 AIF1LQ9BQI0 150 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 BANF2Q9H503 90 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 BATF3Q9NR55 127 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 SPANXA1Q9NS26 97 aa0.43□□□□□ -2.34
TTC39C-207ENST00000581394 MRPL36Q9P0J6 103 aaKnown RBP0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms