RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 NHLRC4P0CG21 123 aaPredicted RBP7.59□□□□□ -1.19
CCDC47-203ENST00000580986 UBE2G1P62253 170 aa7.59□□□□□ -1.19
CCDC47-203ENST00000580986 ERCC8Q13216 396 aa7.59□□□□□ -1.19
CCDC47-203ENST00000580986 SPINK13Q1W4C9 94 aa7.59□□□□□ -1.19
CCDC47-203ENST00000580986 Q86TA4 180 aa7.59□□□□□ -1.19
CCDC47-203ENST00000580986 RARRES2Q99969 163 aa7.59□□□□□ -1.19
CCDC47-203ENST00000580986 RPH3ALQ9UNE2 315 aa7.59□□□□□ -1.19
CCDC47-203ENST00000580986 C9JCJ5 164 aa7.58□□□□□ -1.2
CCDC47-203ENST00000580986 M0R2Z0 102 aa7.58□□□□□ -1.2
CCDC47-203ENST00000580986 INSP01308 110 aa7.58□□□□□ -1.2
CCDC47-203ENST00000580986 IGKV3-20P01619 116 aa7.58□□□□□ -1.2
CCDC47-203ENST00000580986 PEA15Q15121 130 aa7.58□□□□□ -1.2
CCDC47-203ENST00000580986 Q6AWC8 147 aa7.58□□□□□ -1.2
CCDC47-203ENST00000580986 ZNF705AQ6ZN79 300 aaPredicted RBP7.58□□□□□ -1.2
CCDC47-203ENST00000580986 SBSPONQ8IVN8 264 aa7.58□□□□□ -1.2
CCDC47-203ENST00000580986 EIF4E3Q8N5X7 224 aaKnown RBP7.58□□□□□ -1.2
CCDC47-203ENST00000580986 Q8TAT8 98 aa7.58□□□□□ -1.2
CCDC47-203ENST00000580986 PCNPQ8WW12 178 aaKnown RBP7.58□□□□□ -1.2
CCDC47-203ENST00000580986 RNF183Q96D59 192 aa7.58□□□□□ -1.2
CCDC47-203ENST00000580986 NEU1Q99519 415 aa7.58□□□□□ -1.2
CCDC47-203ENST00000580986 SPATA25Q9BR10 227 aa7.58□□□□□ -1.2
CCDC47-203ENST00000580986 MLST8Q9BVC4 326 aa7.58□□□□□ -1.2
CCDC47-203ENST00000580986 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 C7orf71A4D174 169 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 LINC00862A6NCI5 91 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 H7BYZ3 331 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 GPX1P07203 203 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 SRP19P09132 144 aaKnown RBP7.57□□□□□ -1.2
CCDC47-203ENST00000580986 RPL35P42766 123 aaKnown RBP7.57□□□□□ -1.2
CCDC47-203ENST00000580986 SMUG1Q53HV7 270 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 GFI1BQ5VTD9 330 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 UQCC3Q6UW78 93 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 TMEM183AQ8IXX5 376 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 TVP23CQ96ET8 276 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 LINC00479Q96M42 142 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 RCHY1Q96PM5 261 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 LINC00467Q9BRT7 94 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 TREM1Q9NP99 234 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 XCL2Q9UBD3 114 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 GOLT1BQ9Y3E0 138 aa7.57□□□□□ -1.2
CCDC47-203ENST00000580986 PRKDCP78527 4128 aaKnown RBP7.57□□□□□ -1.2
CCDC47-203ENST00000580986 TRAV34A0A0B4J273 112 aa7.56□□□□□ -1.2
CCDC47-203ENST00000580986 SMIM9A6NGZ8 99 aa7.56□□□□□ -1.2
CCDC47-203ENST00000580986 ZNF324O75467 553 aaPredicted RBP7.56□□□□□ -1.2
CCDC47-203ENST00000580986 FAM74A3Q4VXF1 159 aa7.56□□□□□ -1.2
CCDC47-203ENST00000580986 PRNTQ86SH4 94 aa7.56□□□□□ -1.2
CCDC47-203ENST00000580986 PYGO2Q9BRQ0 406 aa7.56□□□□□ -1.2
CCDC47-203ENST00000580986 NIPSNAP3BQ9BS92 247 aa7.56□□□□□ -1.2
CCDC47-203ENST00000580986 PARLQ9H300 379 aa7.56□□□□□ -1.2
CCDC47-203ENST00000580986 ZMAT4Q9H898 229 aa7.56□□□□□ -1.2
CCDC47-203ENST00000580986 LY96Q9Y6Y9 160 aa7.56□□□□□ -1.2
CCDC47-203ENST00000580986 TRAV21A0A0B4J279 112 aa7.55□□□□□ -1.2
CCDC47-203ENST00000580986 SPRY2O43597 315 aa7.55□□□□□ -1.2
CCDC47-203ENST00000580986 PFN1P07737 140 aaKnown RBP7.55□□□□□ -1.2
CCDC47-203ENST00000580986 DEFB135Q30KP9 77 aa7.55□□□□□ -1.2
CCDC47-203ENST00000580986 TDRG1Q3Y452 100 aa7.55□□□□□ -1.2
CCDC47-203ENST00000580986 BAGE2Q86Y30 109 aa7.55□□□□□ -1.2
CCDC47-203ENST00000580986 C1orf158Q8N1D5 194 aa7.55□□□□□ -1.2
CCDC47-203ENST00000580986 ASCL2Q99929 193 aa7.55□□□□□ -1.2
CCDC47-203ENST00000580986 OVOL2Q9BRP0 275 aa7.55□□□□□ -1.2
CCDC47-203ENST00000580986 DERL1Q9BUN8 251 aa7.55□□□□□ -1.2
CCDC47-203ENST00000580986 BIN3Q9NQY0 253 aa7.55□□□□□ -1.2
CCDC47-203ENST00000580986 TRBV20OR9-2A0A075B6H5 130 aa7.54□□□□□ -1.2
CCDC47-203ENST00000580986 TRAV12-2A0A075B6T6 113 aa7.54□□□□□ -1.2
CCDC47-203ENST00000580986 RBMY1A1P0DJD3 496 aaKnown RBP7.54□□□□□ -1.2
CCDC47-203ENST00000580986 RBMY1CP0DJD4 496 aa7.54□□□□□ -1.2
CCDC47-203ENST00000580986 PRB4P10163 310 aaPredicted RBP7.54□□□□□ -1.2
CCDC47-203ENST00000580986 MIFP14174 115 aa7.54□□□□□ -1.2
CCDC47-203ENST00000580986 GNG4P50150 75 aa7.54□□□□□ -1.2
CCDC47-203ENST00000580986 FXYD7P58549 80 aa7.54□□□□□ -1.2
CCDC47-203ENST00000580986 BTN1A1Q13410 526 aa7.54□□□□□ -1.2
CCDC47-203ENST00000580986 KIR3DS1Q14943 382 aa7.54□□□□□ -1.2
CCDC47-203ENST00000580986 RBMY1FQ15415 496 aaKnown RBP7.54□□□□□ -1.2
CCDC47-203ENST00000580986 ZNF674Q2M3X9 581 aa7.54□□□□□ -1.2
CCDC47-203ENST00000580986 CENPWQ5EE01 88 aa7.54□□□□□ -1.2
CCDC47-203ENST00000580986 PRR9Q5T870 116 aa7.54□□□□□ -1.2
CCDC47-203ENST00000580986 SGK494Q96LW2 274 aa7.54□□□□□ -1.2
CCDC47-203ENST00000580986 TRAV12-3A0A0B4J271 114 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 FABP5P3A8MUU1 101 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 C9JQL5 133 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 GCGP01275 180 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 IGLV2-8P01709 118 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 SRSF3P84103 164 aaKnown RBP7.53□□□□□ -1.2
CCDC47-203ENST00000580986 ANXA2RQ3ZCQ2 193 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 FAM162BQ5T6X4 162 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 ZNF493Q6ZR52 646 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 ZC2HC1AQ96GY0 325 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 KCNS1Q96KK3 526 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 C8orf49Q96NF6 230 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 SMIM7Q9BQ49 75 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 C11orf68Q9H3H3 251 aaKnown RBP7.53□□□□□ -1.2
CCDC47-203ENST00000580986 TP53TG3Q9ULZ0 132 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 X6R8D5 127 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
CCDC47-203ENST00000580986 TMEM189A5PLL7 270 aa7.52□□□□□ -1.21
CCDC47-203ENST00000580986 ZNF727A8MUV8 499 aa7.52□□□□□ -1.21
CCDC47-203ENST00000580986 RNASE4P34096 147 aaKnown RBP7.52□□□□□ -1.21
CCDC47-203ENST00000580986 IBA57Q5T440 356 aaKnown RBP7.52□□□□□ -1.21
CCDC47-203ENST00000580986 OR11H2Q8NH07 326 aa7.52□□□□□ -1.21
CCDC47-203ENST00000580986 TMEM263Q8WUH6 116 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms