RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 KHDC3LQ587J8 217 aa10.02□□□□□ -0.81
SMARCE1-216ENST00000580419 A0A096LPF7 62 aa10.01□□□□□ -0.81
SMARCE1-216ENST00000580419 RGS13O14921 159 aa10.01□□□□□ -0.81
SMARCE1-216ENST00000580419 TDRG1Q3Y452 100 aa10.01□□□□□ -0.81
SMARCE1-216ENST00000580419 Q6AWC8 147 aa10.01□□□□□ -0.81
SMARCE1-216ENST00000580419 PRO0255Q9UI72 69 aa10.01□□□□□ -0.81
SMARCE1-216ENST00000580419 IGKV2-40A0A087WW87 121 aaPredicted RBP10□□□□□ -0.81
SMARCE1-216ENST00000580419 TRGV1A0A0A0MS02 117 aa10□□□□□ -0.81
SMARCE1-216ENST00000580419 J3KRW8 73 aa10□□□□□ -0.81
SMARCE1-216ENST00000580419 OR7C2O60412 319 aa10□□□□□ -0.81
SMARCE1-216ENST00000580419 IFNA5P01569 189 aa10□□□□□ -0.81
SMARCE1-216ENST00000580419 IGKV2D-40P01614 121 aaPredicted RBP10□□□□□ -0.81
SMARCE1-216ENST00000580419 PRB4P10163 310 aaPredicted RBP10□□□□□ -0.81
SMARCE1-216ENST00000580419 LRRC37A5PQ49AS3 106 aa10□□□□□ -0.81
SMARCE1-216ENST00000580419 FAM122CQ6P4D5 195 aa10□□□□□ -0.81
SMARCE1-216ENST00000580419 PQLC2Q6ZP29 291 aa10□□□□□ -0.81
SMARCE1-216ENST00000580419 RASL10AQ92737 203 aa10□□□□□ -0.81
SMARCE1-216ENST00000580419 PHYHIPLQ96FC7 376 aa10□□□□□ -0.81
SMARCE1-216ENST00000580419 SPXQ9BT56 116 aa10□□□□□ -0.81
SMARCE1-216ENST00000580419 A0A0J9YY99 117 aa9.99□□□□□ -0.81
SMARCE1-216ENST00000580419 RPL12P30050 165 aaKnown RBP9.99□□□□□ -0.81
SMARCE1-216ENST00000580419 ZNF415Q09FC8 603 aa9.99□□□□□ -0.81
SMARCE1-216ENST00000580419 SCGB1C1Q8TD33 95 aa9.99□□□□□ -0.81
SMARCE1-216ENST00000580419 ARPC5LQ9BPX5 153 aa9.99□□□□□ -0.81
SMARCE1-216ENST00000580419 OTORQ9NRC9 128 aa9.99□□□□□ -0.81
SMARCE1-216ENST00000580419 ICOSQ9Y6W8 199 aa9.99□□□□□ -0.81
SMARCE1-216ENST00000580419 DIRC3C9JPN6 131 aa9.98□□□□□ -0.81
SMARCE1-216ENST00000580419 OR10J4P0C629 311 aa9.98□□□□□ -0.81
SMARCE1-216ENST00000580419 RANP62826 216 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-216ENST00000580419 UBE2L3P68036 154 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-216ENST00000580419 MRPL23Q16540 153 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-216ENST00000580419 FFAR4Q5NUL3 377 aa9.98□□□□□ -0.81
SMARCE1-216ENST00000580419 FAM74A1Q5RGS3 127 aa9.98□□□□□ -0.81
SMARCE1-216ENST00000580419 PRR9Q5T870 116 aa9.98□□□□□ -0.81
SMARCE1-216ENST00000580419 ZNF575Q86XF7 245 aa9.98□□□□□ -0.81
SMARCE1-216ENST00000580419 KRTAP1-5Q9BYS1 174 aa9.98□□□□□ -0.81
SMARCE1-216ENST00000580419 TRGV11A0A075B6L2 103 aa9.97□□□□□ -0.81
SMARCE1-216ENST00000580419 SERTM2A0A1B0GWG4 89 aa9.97□□□□□ -0.81
SMARCE1-216ENST00000580419 C16orf90A8MZG2 172 aa9.97□□□□□ -0.81
SMARCE1-216ENST00000580419 PAX4O43316 350 aa9.97□□□□□ -0.81
SMARCE1-216ENST00000580419 SSNA1O43805 119 aa9.97□□□□□ -0.81
SMARCE1-216ENST00000580419 CRYBA4P53673 196 aa9.97□□□□□ -0.81
SMARCE1-216ENST00000580419 OR10G4Q8NGN3 311 aa9.97□□□□□ -0.81
SMARCE1-216ENST00000580419 HHLA3Q9XRX5 114 aa9.97□□□□□ -0.81
SMARCE1-216ENST00000580419 SIVA1O15304 175 aa9.96□□□□□ -0.82
SMARCE1-216ENST00000580419 FHL2Q14192 279 aa9.96□□□□□ -0.82
SMARCE1-216ENST00000580419 ACOT6Q3I5F7 207 aaPredicted RBP9.96□□□□□ -0.82
SMARCE1-216ENST00000580419 OR2G3Q8NGZ4 309 aa9.96□□□□□ -0.82
SMARCE1-216ENST00000580419 ASB13Q8WXK3 278 aa9.96□□□□□ -0.82
SMARCE1-216ENST00000580419 BATF3Q9NR55 127 aa9.96□□□□□ -0.82
SMARCE1-216ENST00000580419 DNAH5Q8TE73 4624 aa9.96□□□□□ -0.82
SMARCE1-216ENST00000580419 CIDEAO60543 219 aa9.95□□□□□ -0.82
SMARCE1-216ENST00000580419 ORM1P02763 201 aa9.95□□□□□ -0.82
SMARCE1-216ENST00000580419 FAM159AQ6UWV7 190 aa9.95□□□□□ -0.82
SMARCE1-216ENST00000580419 SUN5Q8TC36 379 aa9.95□□□□□ -0.82
SMARCE1-216ENST00000580419 MBD2Q9UBB5 411 aa9.95□□□□□ -0.82
SMARCE1-216ENST00000580419 ABCA13Q86UQ4 5058 aa9.94□□□□□ -0.82
SMARCE1-216ENST00000580419 APOBP04114 4563 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-216ENST00000580419 A0A1W2PPV4 95 aa9.94□□□□□ -0.82
SMARCE1-216ENST00000580419 Q6ZRN7 208 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-216ENST00000580419 NEGR1Q7Z3B1 354 aa9.94□□□□□ -0.82
SMARCE1-216ENST00000580419 SH2D6Q7Z4S9 175 aa9.94□□□□□ -0.82
SMARCE1-216ENST00000580419 NFE4Q86UQ8 179 aa9.94□□□□□ -0.82
SMARCE1-216ENST00000580419 Q8TAT8 98 aa9.94□□□□□ -0.82
SMARCE1-216ENST00000580419 CMTM2Q8TAZ6 248 aa9.94□□□□□ -0.82
SMARCE1-216ENST00000580419 FBLL1A6NHQ2 334 aaKnown RBP9.93□□□□□ -0.82
SMARCE1-216ENST00000580419 LCE2BO14633 110 aa9.93□□□□□ -0.82
SMARCE1-216ENST00000580419 TIRAPP58753 221 aa9.93□□□□□ -0.82
SMARCE1-216ENST00000580419 SERF2P84101 59 aa9.93□□□□□ -0.82
SMARCE1-216ENST00000580419 LYPD5Q6UWN5 251 aa9.93□□□□□ -0.82
SMARCE1-216ENST00000580419 KCNS1Q96KK3 526 aa9.93□□□□□ -0.82
SMARCE1-216ENST00000580419 PSMG3Q9BT73 122 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1-216ENST00000580419 TRAV9-2A0A087WT02 112 aa9.92□□□□□ -0.82
SMARCE1-216ENST00000580419 TRAV4A0A0B4J268 109 aa9.92□□□□□ -0.82
SMARCE1-216ENST00000580419 TRAV21A0A0B4J279 112 aa9.92□□□□□ -0.82
SMARCE1-216ENST00000580419 PGPA6NDG6 321 aa9.92□□□□□ -0.82
SMARCE1-216ENST00000580419 MBP02144 154 aa9.92□□□□□ -0.82
SMARCE1-216ENST00000580419 CDPF1Q6NVV7 123 aa9.92□□□□□ -0.82
SMARCE1-216ENST00000580419 AQP10Q96PS8 301 aa9.92□□□□□ -0.82
SMARCE1-216ENST00000580419 MRPL16Q9NX20 251 aaKnown RBP9.92□□□□□ -0.82
SMARCE1-216ENST00000580419 PGPEP1Q9NXJ5 209 aa9.92□□□□□ -0.82
SMARCE1-216ENST00000580419 MDFICQ9P1T7 246 aa9.92□□□□□ -0.82
SMARCE1-216ENST00000580419 M0R2P5 195 aa9.91□□□□□ -0.82
SMARCE1-216ENST00000580419 NXPH4O95158 308 aa9.91□□□□□ -0.82
SMARCE1-216ENST00000580419 PTTG1O95997 202 aa9.91□□□□□ -0.82
SMARCE1-216ENST00000580419 STAG3L2P0CL84 134 aa9.91□□□□□ -0.82
SMARCE1-216ENST00000580419 STAG3L3P0CL85 134 aa9.91□□□□□ -0.82
SMARCE1-216ENST00000580419 LINC00315P59091 139 aa9.91□□□□□ -0.82
SMARCE1-216ENST00000580419 Q6ZQT7 251 aa9.91□□□□□ -0.82
SMARCE1-216ENST00000580419 PTH2Q96A98 100 aa9.91□□□□□ -0.82
SMARCE1-216ENST00000580419 WFDC1Q9HC57 220 aa9.91□□□□□ -0.82
SMARCE1-216ENST00000580419 TRGV4A0A0C4DH28 118 aa9.9□□□□□ -0.82
SMARCE1-216ENST00000580419 IGHV3-16A0A0C4DH30 117 aa9.9□□□□□ -0.82
SMARCE1-216ENST00000580419 C9JCJ5 164 aa9.9□□□□□ -0.82
SMARCE1-216ENST00000580419 TMEM183BQ1AE95 376 aa9.9□□□□□ -0.82
SMARCE1-216ENST00000580419 SPATA12Q7Z6I5 190 aa9.9□□□□□ -0.82
SMARCE1-216ENST00000580419 TMEM183AQ8IXX5 376 aa9.9□□□□□ -0.82
SMARCE1-216ENST00000580419 C5orf17Q8NAS9 161 aa9.9□□□□□ -0.82
SMARCE1-216ENST00000580419 OR10G9Q8NGN4 311 aa9.9□□□□□ -0.82
SMARCE1-216ENST00000580419 OR10G7Q8NGN6 311 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms