RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 OR10J6PQ8NGY7 276 aa11.14□□□□□ -0.63
CDK5RAP3-218ENST00000580391 MRPL18Q9H0U6 180 aaKnown RBP11.14□□□□□ -0.63
CDK5RAP3-218ENST00000580391 PEMTQ9UBM1 199 aa11.14□□□□□ -0.63
CDK5RAP3-218ENST00000580391 K7EQG2 157 aa11.14□□□□□ -0.63
CDK5RAP3-218ENST00000580391 ID1P41134 155 aa11.14□□□□□ -0.63
CDK5RAP3-218ENST00000580391 PRR9Q5T870 116 aa11.14□□□□□ -0.63
CDK5RAP3-218ENST00000580391 SAMD13Q5VXD3 122 aa11.14□□□□□ -0.63
CDK5RAP3-218ENST00000580391 CCL24O00175 119 aa11.13□□□□□ -0.63
CDK5RAP3-218ENST00000580391 CSN3P07498 182 aa11.13□□□□□ -0.63
CDK5RAP3-218ENST00000580391 RBPMS2Q6ZRY4 209 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-218ENST00000580391 GNB1LQ9BYB4 327 aa11.13□□□□□ -0.63
CDK5RAP3-218ENST00000580391 PPP1R14DQ9NXH3 145 aa11.13□□□□□ -0.63
CDK5RAP3-218ENST00000580391 A0A1B0GXF2 115 aa11.12□□□□□ -0.63
CDK5RAP3-218ENST00000580391 TMEM189A5PLL7 270 aa11.12□□□□□ -0.63
CDK5RAP3-218ENST00000580391 FAM231BA6NCW3 169 aa11.12□□□□□ -0.63
CDK5RAP3-218ENST00000580391 CRLF1O75462 422 aa11.12□□□□□ -0.63
CDK5RAP3-218ENST00000580391 RAB4BP61018 213 aa11.12□□□□□ -0.63
CDK5RAP3-218ENST00000580391 PSMG4Q5JS54 123 aa11.12□□□□□ -0.63
CDK5RAP3-218ENST00000580391 GDF5OSQ5U4N7 250 aa11.12□□□□□ -0.63
CDK5RAP3-218ENST00000580391 J3KRW8 73 aa11.12□□□□□ -0.63
CDK5RAP3-218ENST00000580391 UBE2CO00762 179 aa11.12□□□□□ -0.63
CDK5RAP3-218ENST00000580391 PRR31Q5SQ13 230 aa11.12□□□□□ -0.63
CDK5RAP3-218ENST00000580391 WDR73Q6P4I2 378 aa11.12□□□□□ -0.63
CDK5RAP3-218ENST00000580391 FABP5P3A8MUU1 101 aa11.11□□□□□ -0.63
CDK5RAP3-218ENST00000580391 MT-ND6P03923 174 aa11.11□□□□□ -0.63
CDK5RAP3-218ENST00000580391 CAMPP49913 170 aa11.11□□□□□ -0.63
CDK5RAP3-218ENST00000580391 Q6ZQT7 251 aa11.11□□□□□ -0.63
CDK5RAP3-218ENST00000580391 ATP5L2Q7Z4Y8 100 aa11.11□□□□□ -0.63
CDK5RAP3-218ENST00000580391 LINC00477Q96M19 166 aa11.11□□□□□ -0.63
CDK5RAP3-218ENST00000580391 ADARB2-AS1A8MUL3 147 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 CD33P20138 364 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 KRTAP10-3P60369 221 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 COX19Q49B96 90 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 GFI1BQ5VTD9 330 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 RASL11AQ6T310 242 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 TMEM61Q8N0U2 210 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 ZFAND2AQ8N6M9 145 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 DYNLRB2Q8TF09 96 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 TPPP3Q9BW30 176 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 C11orf21Q9P2W6 132 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 LENEPQ9Y5L5 61 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 HLA-DQA1P01909 254 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 ORM1P02763 201 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 ARMS2P0C7Q2 107 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 FOXA3P55318 350 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 SNRPD3P62318 126 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 HBBP68871 147 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 ZNF575Q86XF7 245 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 FAM19A4Q96LR4 140 aa11.1□□□□□ -0.63
CDK5RAP3-218ENST00000580391 SLAQ13239 276 aa11.09□□□□□ -0.63
CDK5RAP3-218ENST00000580391 KIAA1644Q3SXP7 199 aa11.09□□□□□ -0.63
CDK5RAP3-218ENST00000580391 LINC01559Q495D7 138 aa11.09□□□□□ -0.63
CDK5RAP3-218ENST00000580391 SSBP4Q9BWG4 385 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-218ENST00000580391 XKRY2A2RUG3 117 aa11.08□□□□□ -0.64
CDK5RAP3-218ENST00000580391 HOXA5P20719 270 aa11.08□□□□□ -0.64
CDK5RAP3-218ENST00000580391 PAFAH1B2P68402 229 aa11.08□□□□□ -0.64
CDK5RAP3-218ENST00000580391 KIR3DS1Q14943 382 aa11.08□□□□□ -0.64
CDK5RAP3-218ENST00000580391 NSUN5P1Q3KNT7 163 aa11.08□□□□□ -0.64
CDK5RAP3-218ENST00000580391 IGKV3D-20A0A0C4DH25 116 aa11.08□□□□□ -0.64
CDK5RAP3-218ENST00000580391 A0A1B0GUS0 222 aa11.08□□□□□ -0.64
CDK5RAP3-218ENST00000580391 GRIFINA4D1Z8 144 aa11.08□□□□□ -0.64
CDK5RAP3-218ENST00000580391 LURAP1LQ8IV03 231 aa11.08□□□□□ -0.64
CDK5RAP3-218ENST00000580391 A0A0J9YX75 114 aa11.07□□□□□ -0.64
CDK5RAP3-218ENST00000580391 A0A1B0GUT8 65 aa11.07□□□□□ -0.64
CDK5RAP3-218ENST00000580391 AKR1D1P51857 326 aa11.07□□□□□ -0.64
CDK5RAP3-218ENST00000580391 RPS20P60866 119 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-218ENST00000580391 DEFB114Q30KQ6 69 aa11.07□□□□□ -0.64
CDK5RAP3-218ENST00000580391 CD300EQ496F6 205 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-218ENST00000580391 PDZD11Q5EBL8 140 aa11.07□□□□□ -0.64
CDK5RAP3-218ENST00000580391 Q6AWC8 147 aa11.07□□□□□ -0.64
CDK5RAP3-218ENST00000580391 LYZL1Q6UWQ5 148 aa11.07□□□□□ -0.64
CDK5RAP3-218ENST00000580391 NIPBLQ6KC79 2804 aaeCLIP11.07□□□□□ -0.643e-6■■■■□ 20.4
CDK5RAP3-218ENST00000580391 APCSP02743 223 aa11.07□□□□□ -0.64
CDK5RAP3-218ENST00000580391 IGLC6P0CF74 106 aa11.07□□□□□ -0.64
CDK5RAP3-218ENST00000580391 MUC21A0A0G2JKD1 596 aa11.06□□□□□ -0.64
CDK5RAP3-218ENST00000580391 MUC21A0A140T8X8 626 aa11.06□□□□□ -0.64
CDK5RAP3-218ENST00000580391 IFITM10A6NMD0 228 aa11.06□□□□□ -0.64
CDK5RAP3-218ENST00000580391 CRISP2P16562 243 aa11.06□□□□□ -0.64
CDK5RAP3-218ENST00000580391 CTRLP40313 264 aa11.06□□□□□ -0.64
CDK5RAP3-218ENST00000580391 MUC21Q5SSG8 566 aa11.06□□□□□ -0.64
CDK5RAP3-218ENST00000580391 HIST3H2BBQ8N257 126 aa11.06□□□□□ -0.64
CDK5RAP3-218ENST00000580391 LINC00469Q8N7U9 141 aa11.06□□□□□ -0.64
CDK5RAP3-218ENST00000580391 FER1L6-AS1Q8NA97 138 aa11.06□□□□□ -0.64
CDK5RAP3-218ENST00000580391 CYSRT1A8MQ03 144 aa11.05□□□□□ -0.64
CDK5RAP3-218ENST00000580391 IGKV3-20P01619 116 aa11.05□□□□□ -0.64
CDK5RAP3-218ENST00000580391 GPX1P07203 203 aa11.05□□□□□ -0.64
CDK5RAP3-218ENST00000580391 COA6Q5JTJ3 125 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-218ENST00000580391 APRG1Q8IVJ8 170 aa11.05□□□□□ -0.64
CDK5RAP3-218ENST00000580391 RNASE4P34096 147 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-218ENST00000580391 SSTP61278 116 aa11.05□□□□□ -0.64
CDK5RAP3-218ENST00000580391 NAGKQ9UJ70 344 aa11.05□□□□□ -0.64
CDK5RAP3-218ENST00000580391 TRAV2A0A0B4J234 112 aa11.04□□□□□ -0.64
CDK5RAP3-218ENST00000580391 TRBV7-9A0A0J9YWB2 115 aa11.04□□□□□ -0.64
CDK5RAP3-218ENST00000580391 F2Z2F3 143 aa11.04□□□□□ -0.64
CDK5RAP3-218ENST00000580391 SRIP30626 198 aa11.04□□□□□ -0.64
CDK5RAP3-218ENST00000580391 DEFB131AP59861 70 aa11.04□□□□□ -0.64
CDK5RAP3-218ENST00000580391 RIGQ13278 110 aa11.04□□□□□ -0.64
CDK5RAP3-218ENST00000580391 EBLN2Q6P2I7 272 aa11.04□□□□□ -0.64
CDK5RAP3-218ENST00000580391 BORCS7Q96B45 105 aa11.04□□□□□ -0.64
CDK5RAP3-218ENST00000580391 TP53TG3Q9ULZ0 132 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms