RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 BORCS7Q96B45 105 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 MRPS16Q9Y3D3 137 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 M0R3E3 92 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 LTAP01374 205 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 IGLV1-40P01703 118 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 PMCHL1Q16048 86 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 S100A7AQ86SG5 101 aa9.76□□□□□ -0.85
CDK5RAP3-217ENST00000580287 IGHV3OR16-13A0A075B7E8 117 aa9.75□□□□□ -0.85
CDK5RAP3-217ENST00000580287 IGHV3-74A0A0B4J1X5 117 aa9.75□□□□□ -0.85
CDK5RAP3-217ENST00000580287 ZNF207O43670 478 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-217ENST00000580287 Q86TA4 180 aa9.75□□□□□ -0.85
CDK5RAP3-217ENST00000580287 IGHV3-49A0A0A0MS15 119 aa9.75□□□□□ -0.85
CDK5RAP3-217ENST00000580287 K7EP13 123 aa9.75□□□□□ -0.85
CDK5RAP3-217ENST00000580287 C18orf32Q8TCD1 76 aa9.75□□□□□ -0.85
CDK5RAP3-217ENST00000580287 GTSF1Q8WW33 167 aa9.75□□□□□ -0.85
CDK5RAP3-217ENST00000580287 EEF1AKMT3Q96AZ1 226 aa9.75□□□□□ -0.85
CDK5RAP3-217ENST00000580287 RPP21Q9H633 154 aaKnown RBP9.75□□□□□ -0.85
CDK5RAP3-217ENST00000580287 SELENOKQ9Y6D0 94 aa9.75□□□□□ -0.85
CDK5RAP3-217ENST00000580287 SIGLEC15Q6ZMC9 328 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 Q6ZSV7 163 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 TEX29Q8N6K0 151 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 C11orf44Q8N8P7 122 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 ZNF738Q8NE65 137 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 PGLYRP4Q96LB8 373 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 MLST8Q9BVC4 326 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 TPPP3Q9BW30 176 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 AAMDCQ9H7C9 122 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 IGHV3-66A0A0C4DH42 116 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 K7EQM0 130 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 PSMB8P28062 276 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 KLK9Q2XQG4 91 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 RABAC1Q9UI14 185 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 KLK9Q9UKQ9 250 aa9.74□□□□□ -0.85
CDK5RAP3-217ENST00000580287 CT83Q5H943 113 aa9.73□□□□□ -0.85
CDK5RAP3-217ENST00000580287 OR4X2Q8NGF9 303 aa9.73□□□□□ -0.85
CDK5RAP3-217ENST00000580287 ALKBH7Q9BT30 221 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-217ENST00000580287 TRAV9-2A0A087WT02 112 aa9.73□□□□□ -0.85
CDK5RAP3-217ENST00000580287 IGHG4P01861 327 aa9.73□□□□□ -0.85
CDK5RAP3-217ENST00000580287 IGFL4Q6B9Z1 124 aa9.73□□□□□ -0.85
CDK5RAP3-217ENST00000580287 EBLN2Q6P2I7 272 aa9.73□□□□□ -0.85
CDK5RAP3-217ENST00000580287 C18orf65Q6ZTR6 163 aa9.73□□□□□ -0.85
CDK5RAP3-217ENST00000580287 SMIM12Q96EX1 92 aa9.73□□□□□ -0.85
CDK5RAP3-217ENST00000580287 TP73-AS1Q9UF72 201 aa9.73□□□□□ -0.85
CDK5RAP3-217ENST00000580287 A8MWL6 223 aa9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 IGLV2-11P01706 119 aa9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 TRBV7-1A0A0A6YYK4 115 aa9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 FAM223BA6NKX1 122 aa9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 MRPS12O15235 138 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 APOHP02749 345 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 IGLL1P15814 213 aa9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 RPL7P18124 248 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 ZNF138P52744 262 aa9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 RNASEKQ6P5S7 137 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 UNQ9165/PRO28630Q6UXU0 137 aa9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 FAM223AQ8IWN6 122 aa9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 MAST4O15021 2626 aa9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 C2CD3Q4AC94 2353 aa9.72□□□□□ -0.85
CDK5RAP3-217ENST00000580287 CSN1S1P47710 185 aa9.71□□□□□ -0.85
CDK5RAP3-217ENST00000580287 C4orf48Q5BLP8 95 aa9.71□□□□□ -0.85
CDK5RAP3-217ENST00000580287 SPATA12Q7Z6I5 190 aa9.71□□□□□ -0.85
CDK5RAP3-217ENST00000580287 PSG8Q9UQ74 426 aa9.71□□□□□ -0.85
CDK5RAP3-217ENST00000580287 TIMM8BQ9Y5J9 83 aaPredicted RBP9.71□□□□□ -0.85
CDK5RAP3-217ENST00000580287 ZNF785A8K8V0 405 aa9.71□□□□□ -0.86
CDK5RAP3-217ENST00000580287 M0R2Z0 102 aa9.71□□□□□ -0.86
CDK5RAP3-217ENST00000580287 HSBP1O75506 76 aa9.71□□□□□ -0.86
CDK5RAP3-217ENST00000580287 LYPD1Q8N2G4 141 aa9.71□□□□□ -0.86
CDK5RAP3-217ENST00000580287 WIPF2Q8TF74 440 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-217ENST00000580287 ZC2HC1AQ96GY0 325 aa9.71□□□□□ -0.86
CDK5RAP3-217ENST00000580287 MUC21A0A0G2JKD1 596 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 MUC21A0A140T8X8 626 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 C19orf71A6NCJ1 209 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 PSG3Q16557 428 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 MUC21Q5SSG8 566 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 TMEM86BQ8N661 226 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 MCRIP2Q9BUT9 160 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 ZFAND3Q9H8U3 227 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 HAX1O00165 279 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 EDN2P20800 178 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 KLF5Q13887 457 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 TCTEX1D4Q5JR98 221 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 Q8N2B8 174 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 TMEM75Q8N9X5 138 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 OR4C5Q8NGB2 326 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 ZNF418Q8TF45 676 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 ZNF492Q9P255 531 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 WNK1Q9H4A3 2382 aa9.7□□□□□ -0.86
CDK5RAP3-217ENST00000580287 IGKV2-40A0A087WW87 121 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 CLPSL1A2RUU4 121 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 C2orf70A6NJV1 201 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 IGKV2D-40P01614 121 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 DEFB136Q30KP8 78 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 LINC00173Q6ZV60 143 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 ERASQ7Z444 233 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 URB1-AS1Q96HZ7 61 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 USMG5Q96IX5 58 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 DUX3Q96PT4 197 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 HLA-DMBP28068 263 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 HILS1P60008 231 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 PSG9Q00887 426 aa9.69□□□□□ -0.86
CDK5RAP3-217ENST00000580287 PDE6HQ13956 83 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 902.2 ms