RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 TMEM70Q9BUB7 260 aa7.56□□□□□ -1.2
SUPT4H1-203ENST00000579289 AGPAT4-IT1Q9H0P7 198 aa7.56□□□□□ -1.2
SUPT4H1-203ENST00000579289 AAMDCQ9H7C9 122 aa7.56□□□□□ -1.2
SUPT4H1-203ENST00000579289 PLA2G2DQ9UNK4 145 aa7.56□□□□□ -1.2
SUPT4H1-203ENST00000579289 A0A096LPF7 62 aa7.55□□□□□ -1.2
SUPT4H1-203ENST00000579289 TRAV12-3A0A0B4J271 114 aa7.55□□□□□ -1.2
SUPT4H1-203ENST00000579289 H7BYZ3 331 aa7.55□□□□□ -1.2
SUPT4H1-203ENST00000579289 ERVFC1-1P60608 527 aa7.55□□□□□ -1.2
SUPT4H1-203ENST00000579289 RNASE8Q8TDE3 154 aaKnown RBP7.55□□□□□ -1.2
SUPT4H1-203ENST00000579289 GNPNAT1Q96EK6 184 aaPredicted RBP7.55□□□□□ -1.2
SUPT4H1-203ENST00000579289 PHYHIPLQ96FC7 376 aa7.55□□□□□ -1.2
SUPT4H1-203ENST00000579289 C16orf74Q96GX8 76 aa7.55□□□□□ -1.2
SUPT4H1-203ENST00000579289 LINC00477Q96M19 166 aa7.55□□□□□ -1.2
SUPT4H1-203ENST00000579289 ODF3Q96PU9 254 aa7.55□□□□□ -1.2
SUPT4H1-203ENST00000579289 C20orf144Q9BQM9 153 aa7.55□□□□□ -1.2
SUPT4H1-203ENST00000579289 IGKV2-40A0A087WW87 121 aaPredicted RBP7.54□□□□□ -1.2
SUPT4H1-203ENST00000579289 A0A0J9YY99 117 aa7.54□□□□□ -1.2
SUPT4H1-203ENST00000579289 IGKV2D-40P01614 121 aaPredicted RBP7.54□□□□□ -1.2
SUPT4H1-203ENST00000579289 RANP62826 216 aaKnown RBP7.54□□□□□ -1.2
SUPT4H1-203ENST00000579289 UBE2L3P68036 154 aaKnown RBP7.54□□□□□ -1.2
SUPT4H1-203ENST00000579289 RGS21Q2M5E4 152 aa7.54□□□□□ -1.2
SUPT4H1-203ENST00000579289 ZNF493Q6ZR52 646 aa7.54□□□□□ -1.2
SUPT4H1-203ENST00000579289 C9orf47Q6ZRZ4 202 aa7.54□□□□□ -1.2
SUPT4H1-203ENST00000579289 SYT8Q8NBV8 401 aa7.54□□□□□ -1.2
SUPT4H1-203ENST00000579289 FAM19A4Q96LR4 140 aa7.54□□□□□ -1.2
SUPT4H1-203ENST00000579289 VGLL1Q99990 258 aa7.54□□□□□ -1.2
SUPT4H1-203ENST00000579289 C7orf71A4D174 169 aa7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 GIPP09681 153 aaPredicted RBP7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 M6PRP20645 277 aa7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 RNASE4P34096 147 aaKnown RBP7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 TAS2R45P59539 299 aa7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 RAB2AP61019 212 aa7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 CD300CQ08708 224 aa7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 ACOT6Q3I5F7 207 aaPredicted RBP7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 KHDC3LQ587J8 217 aa7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 HSD17B11Q8NBQ5 300 aa7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 TMEM263Q8WUH6 116 aaKnown RBP7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 AQP10Q96PS8 301 aa7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 NOP10Q9NPE3 64 aaKnown RBP7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 TIMM8BQ9Y5J9 83 aaPredicted RBP7.53□□□□□ -1.2
SUPT4H1-203ENST00000579289 A0A1W2PPV4 95 aa7.52□□□□□ -1.21
SUPT4H1-203ENST00000579289 LRCOL1A6NCL2 159 aa7.52□□□□□ -1.21
SUPT4H1-203ENST00000579289 KLLNB2CW77 178 aa7.52□□□□□ -1.21
SUPT4H1-203ENST00000579289 SIVA1O15304 175 aa7.52□□□□□ -1.21
SUPT4H1-203ENST00000579289 SLC25A5P05141 298 aaKnown RBP7.52□□□□□ -1.21
SUPT4H1-203ENST00000579289 CRISP2P16562 243 aa7.52□□□□□ -1.21
SUPT4H1-203ENST00000579289 BTN1A1Q13410 526 aa7.52□□□□□ -1.21
SUPT4H1-203ENST00000579289 Q6ZSA8 131 aa7.52□□□□□ -1.21
SUPT4H1-203ENST00000579289 CCDC28AQ8IWP9 274 aa7.52□□□□□ -1.21
SUPT4H1-203ENST00000579289 OR10G4Q8NGN3 311 aa7.52□□□□□ -1.21
SUPT4H1-203ENST00000579289 OR10G9Q8NGN4 311 aa7.52□□□□□ -1.21
SUPT4H1-203ENST00000579289 OR10G7Q8NGN6 311 aa7.52□□□□□ -1.21
SUPT4H1-203ENST00000579289 FXYD6-FXYD2A0A087WZ82 144 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 HMGB3O15347 200 aaKnown RBP7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 ZNF324O75467 553 aaPredicted RBP7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 GPX1P07203 203 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 CSN1S1P47710 185 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 OR5I1Q13606 314 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 ZNF266Q14584 549 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 TMEM78Q5T7P6 136 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 PRR9Q5T870 116 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 Q6ZQT7 251 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 ZFAND2AQ8N6M9 145 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 OR2T35Q8NGX2 323 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 Q8TAT8 98 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 DEFB104AQ8WTQ1 72 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 ASB13Q8WXK3 278 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 PYGO2Q9BRQ0 406 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 ZNF492Q9P255 531 aa7.51□□□□□ -1.21
SUPT4H1-203ENST00000579289 OXTP01178 125 aa7.5□□□□□ -1.21
SUPT4H1-203ENST00000579289 ATP6V0CP27449 155 aa7.5□□□□□ -1.21
SUPT4H1-203ENST00000579289 ZNF138P52744 262 aa7.5□□□□□ -1.21
SUPT4H1-203ENST00000579289 PQLC2Q6ZP29 291 aa7.5□□□□□ -1.21
SUPT4H1-203ENST00000579289 INO80EQ8NBZ0 244 aaPredicted RBP7.5□□□□□ -1.21
SUPT4H1-203ENST00000579289 OR2G3Q8NGZ4 309 aa7.5□□□□□ -1.21
SUPT4H1-203ENST00000579289 HYLS1Q96M11 299 aa7.5□□□□□ -1.21
SUPT4H1-203ENST00000579289 PSMG3Q9BT73 122 aaPredicted RBP7.5□□□□□ -1.21
SUPT4H1-203ENST00000579289 OTORQ9NRC9 128 aa7.5□□□□□ -1.21
SUPT4H1-203ENST00000579289 GAGE12BA1L429 117 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 RBAKDNA6NC62 111 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 RNF222A6NCQ9 220 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 PGPA6NDG6 321 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 SNURFLB1AK76 121 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 DIRC3C9JPN6 131 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 G3V3Q6 166 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 EREGO14944 169 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 GAGE7O76087 117 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 NMBP08949 121 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 GAGE12FP0CL80 117 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 GAGE12GP0CL81 117 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 GAGE12IP0CL82 117 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 CDC34P49427 236 aaPredicted RBP7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 RPL7L1Q6DKI1 246 aaKnown RBP7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 SH3BGRL3Q9H299 93 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 GSN-AS1Q9NRJ2 163 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 TNFSF18Q9UNG2 199 aa7.49□□□□□ -1.21
SUPT4H1-203ENST00000579289 RGS13O14921 159 aa7.48□□□□□ -1.21
SUPT4H1-203ENST00000579289 STAG3L2P0CL84 134 aa7.48□□□□□ -1.21
SUPT4H1-203ENST00000579289 STAG3L3P0CL85 134 aa7.48□□□□□ -1.21
SUPT4H1-203ENST00000579289 ARL14EPLP0DKL9 152 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms