RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 CRISP2P16562 243 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 ZNF138P52744 262 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 RANP62826 216 aaKnown RBP6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 UBE2L3P68036 154 aaKnown RBP6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 CYCSP99999 105 aaKnown RBP6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 ZNF415Q09FC8 603 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 FFAR4Q5NUL3 377 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 MUC21Q5SSG8 566 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 IBA57Q5T440 356 aaKnown RBP6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 ZFAND2AQ8N6M9 145 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 PPP1R1CQ8WVI7 109 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 FXYD5Q96DB9 178 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 HYLS1Q96M11 299 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 ATP5SQ99766 215 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 LINC00467Q9BRT7 94 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 SMIM3Q9BZL3 60 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 RPH3ALQ9UNE2 315 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 ICOSQ9Y6W8 199 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 RYR1P21817 5038 aa6.36□□□□□ -1.39
CDK5RAP3-211ENST00000578996 A0A1W2PPQ1 181 aa6.35□□□□□ -1.39
CDK5RAP3-211ENST00000578996 EIF3GO75821 320 aaKnown RBP eCLIP6.35□□□□□ -1.39
CDK5RAP3-211ENST00000578996 IFNA5P01569 189 aa6.35□□□□□ -1.39
CDK5RAP3-211ENST00000578996 C1QBP02746 253 aa6.35□□□□□ -1.39
CDK5RAP3-211ENST00000578996 NMBP08949 121 aa6.35□□□□□ -1.39
CDK5RAP3-211ENST00000578996 PET100P0DJ07 73 aa6.35□□□□□ -1.39
CDK5RAP3-211ENST00000578996 H2BFSP57053 126 aa6.35□□□□□ -1.39
CDK5RAP3-211ENST00000578996 MAPKAPK5-AS1Q8N8E1 139 aa6.35□□□□□ -1.39
CDK5RAP3-211ENST00000578996 SCGB1C1Q8TD33 95 aa6.35□□□□□ -1.39
CDK5RAP3-211ENST00000578996 NAGKQ9UJ70 344 aa6.35□□□□□ -1.39
CDK5RAP3-211ENST00000578996 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 TRGV4A0A0C4DH28 118 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 SIVA1O15304 175 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 GIPP09681 153 aaPredicted RBP6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 LINC00315P59091 139 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 TAS2R45P59539 299 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 ZFP69Q49AA0 526 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 KHDC3LQ587J8 217 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 C18orf15Q96N68 181 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 C8orf49Q96NF6 230 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 KRTAP4-5Q9BYR2 181 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 PRO0255Q9UI72 69 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 HHLA3Q9XRX5 114 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 HSPB11Q9Y547 144 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 HSPG2P98160 4391 aa6.34□□□□□ -1.39
CDK5RAP3-211ENST00000578996 ABCA13Q86UQ4 5058 aa6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 CDK2AP2O75956 126 aa6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 NXPH4O95158 308 aa6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 MPC2O95563 127 aa6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 SFTA3P0C7M3 94 aa6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 RPL12P30050 165 aaKnown RBP6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 CRYBA4P53673 196 aa6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 TMEM183BQ1AE95 376 aa6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 FAM159AQ6UWV7 190 aa6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 TMEM183AQ8IXX5 376 aa6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 LYPD1Q8N2G4 141 aa6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 CMTM2Q8TAZ6 248 aa6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 MDFICQ9P1T7 246 aa6.33□□□□□ -1.4
CDK5RAP3-211ENST00000578996 TRGV11A0A075B6L2 103 aa6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 A0A1W2PPV4 95 aa6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 RBAKDNA6NC62 111 aa6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 PGPA6NDG6 321 aa6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 DIRC3C9JPN6 131 aa6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 KRTAP10-2P60368 255 aa6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 SLAQ13239 276 aa6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 FHL2Q14192 279 aa6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 ZNF266Q14584 549 aa6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 MRPL23Q16540 153 aaKnown RBP6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 FAM74A1Q5RGS3 127 aa6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 PCNPQ8WW12 178 aaKnown RBP6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 MBD2Q9UBB5 411 aa6.32□□□□□ -1.4
CDK5RAP3-211ENST00000578996 TRBV7-9A0A0J9YWB2 115 aa6.31□□□□□ -1.4
CDK5RAP3-211ENST00000578996 F6UZH7 168 aa6.31□□□□□ -1.4
CDK5RAP3-211ENST00000578996 HMGB3O15347 200 aaKnown RBP6.31□□□□□ -1.4
CDK5RAP3-211ENST00000578996 BTF3P20290 206 aaKnown RBP6.31□□□□□ -1.4
CDK5RAP3-211ENST00000578996 SRIP30626 198 aa6.31□□□□□ -1.4
CDK5RAP3-211ENST00000578996 ACOT6Q3I5F7 207 aaPredicted RBP6.31□□□□□ -1.4
CDK5RAP3-211ENST00000578996 Q6AWC8 147 aa6.31□□□□□ -1.4
CDK5RAP3-211ENST00000578996 GOLT1AQ6ZVE7 132 aa6.31□□□□□ -1.4
CDK5RAP3-211ENST00000578996 NEGR1Q7Z3B1 354 aa6.31□□□□□ -1.4
CDK5RAP3-211ENST00000578996 ZNF479Q96JC4 524 aa6.31□□□□□ -1.4
CDK5RAP3-211ENST00000578996 OTORQ9NRC9 128 aa6.31□□□□□ -1.4
CDK5RAP3-211ENST00000578996 TNFRSF18Q9Y5U5 241 aa6.31□□□□□ -1.4
CDK5RAP3-211ENST00000578996 K7EQD1 137 aa6.3□□□□□ -1.4
CDK5RAP3-211ENST00000578996 EREGO14944 169 aa6.3□□□□□ -1.4
CDK5RAP3-211ENST00000578996 GYPEP15421 78 aa6.3□□□□□ -1.4
CDK5RAP3-211ENST00000578996 FUSP35637 526 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDK5RAP3-211ENST00000578996 RAB2AP61019 212 aa6.3□□□□□ -1.4
CDK5RAP3-211ENST00000578996 GNG5P63218 68 aa6.3□□□□□ -1.4
CDK5RAP3-211ENST00000578996 LYPD5Q6UWN5 251 aa6.3□□□□□ -1.4
CDK5RAP3-211ENST00000578996 SPXQ9BT56 116 aa6.3□□□□□ -1.4
CDK5RAP3-211ENST00000578996 WFDC1Q9HC57 220 aa6.3□□□□□ -1.4
CDK5RAP3-211ENST00000578996 LENEPQ9Y5L5 61 aa6.3□□□□□ -1.4
CDK5RAP3-211ENST00000578996 LY96Q9Y6Y9 160 aa6.3□□□□□ -1.4
CDK5RAP3-211ENST00000578996 DNAH5Q8TE73 4624 aa6.29□□□□□ -1.4
CDK5RAP3-211ENST00000578996 APOBP04114 4563 aaKnown RBP6.29□□□□□ -1.4
CDK5RAP3-211ENST00000578996 TRAV9-2A0A087WT02 112 aa6.29□□□□□ -1.4
CDK5RAP3-211ENST00000578996 TRAV8-1A0A0A6YYK1 113 aa6.29□□□□□ -1.4
CDK5RAP3-211ENST00000578996 TRAV21A0A0B4J279 112 aa6.29□□□□□ -1.4
CDK5RAP3-211ENST00000578996 HMSDA8MTL9 139 aa6.29□□□□□ -1.4
CDK5RAP3-211ENST00000578996 G3V3Q6 166 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms