RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 LTAP01374 205 aa8.85□□□□□ -0.99
IFT20-207ENST00000578547 GNG4P50150 75 aa8.85□□□□□ -0.99
IFT20-207ENST00000578547 SAPCD1Q5SSQ6 148 aa8.85□□□□□ -0.99
IFT20-207ENST00000578547 RCHY1Q96PM5 261 aa8.85□□□□□ -0.99
IFT20-207ENST00000578547 TMEM208Q9BTX3 173 aa8.85□□□□□ -0.99
IFT20-207ENST00000578547 PARLQ9H300 379 aa8.85□□□□□ -0.99
IFT20-207ENST00000578547 TRBV7-9A0A0J9YWB2 115 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 TRBV6-1A0A0K0K1D8 114 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 KLLNB2CW77 178 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 GCGP01275 180 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 RBMY1A1P0DJD3 496 aaKnown RBP8.84□□□□□ -0.99
IFT20-207ENST00000578547 RBMY1CP0DJD4 496 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 TAS2R60P59551 318 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 RBMY1FQ15415 496 aaKnown RBP8.84□□□□□ -0.99
IFT20-207ENST00000578547 SMUG1Q53HV7 270 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 NBEAL2Q6ZNJ1 2754 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 Q6ZWC4 215 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 BAGE2Q86Y30 109 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 SMIM7Q9BQ49 75 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 NIPSNAP3BQ9BS92 247 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 ZFP30Q9Y2G7 519 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 GOLT1BQ9Y3E0 138 aa8.84□□□□□ -0.99
IFT20-207ENST00000578547 TRBV20OR9-2A0A075B6H5 130 aa8.83□□□□□ -1
IFT20-207ENST00000578547 PGPEP1LA6NFU8 196 aa8.83□□□□□ -1
IFT20-207ENST00000578547 SPRY2O43597 315 aa8.83□□□□□ -1
IFT20-207ENST00000578547 MGST1P10620 155 aaKnown RBP8.83□□□□□ -1
IFT20-207ENST00000578547 HTN1P15515 57 aa8.83□□□□□ -1
IFT20-207ENST00000578547 Q6ZQT7 251 aa8.83□□□□□ -1
IFT20-207ENST00000578547 C1orf158Q8N1D5 194 aa8.83□□□□□ -1
IFT20-207ENST00000578547 CSNK1G2-AS1Q8NCQ2 148 aa8.83□□□□□ -1
IFT20-207ENST00000578547 ZC2HC1AQ96GY0 325 aa8.83□□□□□ -1
IFT20-207ENST00000578547 SPATA25Q9BR10 227 aa8.83□□□□□ -1
IFT20-207ENST00000578547 KRTAP3-3Q9BYR6 98 aa8.83□□□□□ -1
IFT20-207ENST00000578547 KRTAP3-2Q9BYR7 98 aa8.83□□□□□ -1
IFT20-207ENST00000578547 SMDT1Q9H4I9 107 aa8.83□□□□□ -1
IFT20-207ENST00000578547 NAGKQ9UJ70 344 aa8.83□□□□□ -1
IFT20-207ENST00000578547 LINC00862A6NCI5 91 aa8.82□□□□□ -1
IFT20-207ENST00000578547 ZNF727A8MUV8 499 aa8.82□□□□□ -1
IFT20-207ENST00000578547 SFTA3P0C7M3 94 aa8.82□□□□□ -1
IFT20-207ENST00000578547 ZNF80P51504 273 aaPredicted RBP8.82□□□□□ -1
IFT20-207ENST00000578547 PRR27Q6MZM9 219 aa8.82□□□□□ -1
IFT20-207ENST00000578547 TMEM183AQ8IXX5 376 aa8.82□□□□□ -1
IFT20-207ENST00000578547 RNF183Q96D59 192 aa8.82□□□□□ -1
IFT20-207ENST00000578547 LINC01587Q99440 93 aa8.82□□□□□ -1
IFT20-207ENST00000578547 TM2D3Q9BRN9 247 aa8.82□□□□□ -1
IFT20-207ENST00000578547 ZMAT4Q9H898 229 aa8.82□□□□□ -1
IFT20-207ENST00000578547 TRAV21A0A0B4J279 112 aa8.81□□□□□ -1
IFT20-207ENST00000578547 NDUFS6O75380 124 aaKnown RBP8.81□□□□□ -1
IFT20-207ENST00000578547 MUC21Q5SSG8 566 aa8.81□□□□□ -1
IFT20-207ENST00000578547 TMEM256Q8N2U0 113 aa8.81□□□□□ -1
IFT20-207ENST00000578547 OR11H2Q8NH07 326 aa8.81□□□□□ -1
IFT20-207ENST00000578547 C20orf144Q9BQM9 153 aa8.81□□□□□ -1
IFT20-207ENST00000578547 OVOL2Q9BRP0 275 aa8.81□□□□□ -1
IFT20-207ENST00000578547 DNAH9Q9NYC9 4486 aa8.81□□□□□ -1
IFT20-207ENST00000578547 ZNF705GA8MUZ8 300 aaPredicted RBP8.8□□□□□ -1
IFT20-207ENST00000578547 C9JCJ5 164 aa8.8□□□□□ -1
IFT20-207ENST00000578547 H7BYZ3 331 aa8.8□□□□□ -1
IFT20-207ENST00000578547 SH2D1AO60880 128 aa8.8□□□□□ -1
IFT20-207ENST00000578547 ZNF324O75467 553 aaPredicted RBP8.8□□□□□ -1
IFT20-207ENST00000578547 IGLV2-8P01709 118 aa8.8□□□□□ -1
IFT20-207ENST00000578547 PRM2P04554 102 aa8.8□□□□□ -1
IFT20-207ENST00000578547 PFN1P07737 140 aaKnown RBP8.8□□□□□ -1
IFT20-207ENST00000578547 SOHLH1Q5JUK2 328 aa8.8□□□□□ -1
IFT20-207ENST00000578547 FAM162BQ5T6X4 162 aa8.8□□□□□ -1
IFT20-207ENST00000578547 Q6AWC8 147 aa8.8□□□□□ -1
IFT20-207ENST00000578547 UQCC3Q6UW78 93 aa8.8□□□□□ -1
IFT20-207ENST00000578547 ZNF705AQ6ZN79 300 aaPredicted RBP8.8□□□□□ -1
IFT20-207ENST00000578547 MLST8Q9BVC4 326 aa8.8□□□□□ -1
IFT20-207ENST00000578547 TP53TG1Q9Y2A0 90 aa8.8□□□□□ -1
IFT20-207ENST00000578547 NHLRC4P0CG21 123 aaPredicted RBP8.79□□□□□ -1
IFT20-207ENST00000578547 FAM74A3Q4VXF1 159 aa8.79□□□□□ -1
IFT20-207ENST00000578547 X6R8D5 127 aa8.79□□□□□ -1
IFT20-207ENST00000578547 TGP01266 2768 aa8.78□□□□□ -1
IFT20-207ENST00000578547 IGHV1OR15-1A0A075B7D0 117 aa8.78□□□□□ -1
IFT20-207ENST00000578547 CBY3A6NI87 242 aa8.78□□□□□ -1
IFT20-207ENST00000578547 FABP5P3A8MUU1 101 aa8.78□□□□□ -1
IFT20-207ENST00000578547 K7EN84 100 aa8.78□□□□□ -1
IFT20-207ENST00000578547 M0R036 132 aa8.78□□□□□ -1
IFT20-207ENST00000578547 CRIP1P50238 77 aa8.78□□□□□ -1
IFT20-207ENST00000578547 OR5I1Q13606 314 aa8.78□□□□□ -1
IFT20-207ENST00000578547 RRN3P1Q2M238 152 aa8.78□□□□□ -1
IFT20-207ENST00000578547 FAM159AQ6UWV7 190 aa8.78□□□□□ -1
IFT20-207ENST00000578547 COX8CQ7Z4L0 72 aa8.78□□□□□ -1
IFT20-207ENST00000578547 OCC1Q8TAD7 63 aa8.78□□□□□ -1
IFT20-207ENST00000578547 SMIM12Q96EX1 92 aa8.78□□□□□ -1
IFT20-207ENST00000578547 PYGO2Q9BRQ0 406 aa8.78□□□□□ -1
IFT20-207ENST00000578547 C11orf21Q9P2W6 132 aa8.78□□□□□ -1
IFT20-207ENST00000578547 NAT8Q9UHE5 227 aa8.78□□□□□ -1
IFT20-207ENST00000578547 TENM3Q9P273 2699 aa8.78□□□□□ -1
IFT20-207ENST00000578547 COL7A1Q02388 2944 aa8.77□□□□□ -1
IFT20-207ENST00000578547 TMSB15BA0A087X1C1 80 aa8.77□□□□□ -1.01
IFT20-207ENST00000578547 IGHV4-28A0A0C4DH34 117 aa8.77□□□□□ -1.01
IFT20-207ENST00000578547 DEFB4AO15263 64 aa8.77□□□□□ -1.01
IFT20-207ENST00000578547 ORM1P02763 201 aa8.77□□□□□ -1.01
IFT20-207ENST00000578547 AZU1P20160 251 aa8.77□□□□□ -1.01
IFT20-207ENST00000578547 EMP1P54849 157 aa8.77□□□□□ -1.01
IFT20-207ENST00000578547 ADIRFQ15847 76 aa8.77□□□□□ -1.01
IFT20-207ENST00000578547 TMEM241Q24JQ0 296 aa8.77□□□□□ -1.01
IFT20-207ENST00000578547 ANXA2RQ3ZCQ2 193 aa8.77□□□□□ -1.01
IFT20-207ENST00000578547 EIF4E3Q8N5X7 224 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms