RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 K7EQG2 157 aa8.41□□□□□ -1.06
SKA2-204ENST00000578519 ZNF324O75467 553 aaPredicted RBP8.41□□□□□ -1.06
SKA2-204ENST00000578519 SCGB1D1O95968 90 aa8.41□□□□□ -1.06
SKA2-204ENST00000578519 OR5AL1P0C617 328 aa8.41□□□□□ -1.06
SKA2-204ENST00000578519 S100A4P26447 101 aaKnown RBP8.41□□□□□ -1.06
SKA2-204ENST00000578519 CMC4P56277 68 aaPredicted RBP8.41□□□□□ -1.06
SKA2-204ENST00000578519 FAM104BQ5XKR9 115 aa8.41□□□□□ -1.06
SKA2-204ENST00000578519 KLHL30-AS1Q8NEE0 82 aa8.41□□□□□ -1.06
SKA2-204ENST00000578519 OR11H1Q8NG94 326 aa8.41□□□□□ -1.06
SKA2-204ENST00000578519 DYNLRB2Q8TF09 96 aa8.41□□□□□ -1.06
SKA2-204ENST00000578519 DCANP1Q8TF63 244 aa8.41□□□□□ -1.06
SKA2-204ENST00000578519 CNFNQ9BYD5 112 aa8.41□□□□□ -1.06
SKA2-204ENST00000578519 KRTAP4-8Q9BYQ9 185 aa8.41□□□□□ -1.06
SKA2-204ENST00000578519 TMEM191AQ9H0A3 160 aa8.41□□□□□ -1.06
SKA2-204ENST00000578519 LAMTOR2Q9Y2Q5 125 aa8.41□□□□□ -1.06
SKA2-204ENST00000578519 UBR5O95071 2799 aaPredicted RBP8.4□□□□□ -1.06
SKA2-204ENST00000578519 MYO18BQ8IUG5 2567 aa8.4□□□□□ -1.06
SKA2-204ENST00000578519 TRAV25A0A0B4J276 109 aa8.4□□□□□ -1.06
SKA2-204ENST00000578519 PCP4L1A6NKN8 68 aa8.4□□□□□ -1.06
SKA2-204ENST00000578519 LINC00614P0C842 121 aa8.4□□□□□ -1.06
SKA2-204ENST00000578519 NTF3P20783 257 aa8.4□□□□□ -1.06
SKA2-204ENST00000578519 ASIPP42127 132 aa8.4□□□□□ -1.06
SKA2-204ENST00000578519 SPANXN1Q5VSR9 72 aa8.4□□□□□ -1.06
SKA2-204ENST00000578519 NIT1Q86X76 327 aa8.4□□□□□ -1.06
SKA2-204ENST00000578519 APRG1Q8IVJ8 170 aa8.4□□□□□ -1.06
SKA2-204ENST00000578519 ORMDL3Q8N138 153 aa8.4□□□□□ -1.06
SKA2-204ENST00000578519 OR9G4Q8NGQ1 327 aa8.4□□□□□ -1.06
SKA2-204ENST00000578519 TSSC4Q9Y5U2 329 aaPredicted RBP8.4□□□□□ -1.06
SKA2-204ENST00000578519 SMG1Q96Q15 3661 aaKnown RBP8.4□□□□□ -1.07
SKA2-204ENST00000578519 TSTD3H0UI37 97 aa8.39□□□□□ -1.07
SKA2-204ENST00000578519 M0R2Z0 102 aa8.39□□□□□ -1.07
SKA2-204ENST00000578519 NDUFA7O95182 113 aa8.39□□□□□ -1.07
SKA2-204ENST00000578519 HILS1P60008 231 aa8.39□□□□□ -1.07
SKA2-204ENST00000578519 KRTAP1-1Q07627 177 aa8.39□□□□□ -1.07
SKA2-204ENST00000578519 PSMG4Q5JS54 123 aa8.39□□□□□ -1.07
SKA2-204ENST00000578519 RNASEKQ6P5S7 137 aaKnown RBP8.39□□□□□ -1.07
SKA2-204ENST00000578519 FAM159AQ6UWV7 190 aa8.39□□□□□ -1.07
SKA2-204ENST00000578519 FOXI2Q6ZQN5 318 aa8.39□□□□□ -1.07
SKA2-204ENST00000578519 FA2HQ7L5A8 372 aa8.39□□□□□ -1.07
SKA2-204ENST00000578519 PRSS3P2Q8NHM4 247 aa8.39□□□□□ -1.07
SKA2-204ENST00000578519 FAM19A4Q96LR4 140 aa8.39□□□□□ -1.07
SKA2-204ENST00000578519 TP53TG3Q9ULZ0 132 aa8.39□□□□□ -1.07
SKA2-204ENST00000578519 IGHV4-4A0A075B6R2 117 aa8.38□□□□□ -1.07
SKA2-204ENST00000578519 OR4C46A6NHA9 309 aa8.38□□□□□ -1.07
SKA2-204ENST00000578519 SNAI2O43623 268 aa8.38□□□□□ -1.07
SKA2-204ENST00000578519 ZNF705DP0CH99 300 aaPredicted RBP8.38□□□□□ -1.07
SKA2-204ENST00000578519 ZNF705BP0CI00 300 aaPredicted RBP8.38□□□□□ -1.07
SKA2-204ENST00000578519 FOSL1P15407 271 aa8.38□□□□□ -1.07
SKA2-204ENST00000578519 CKS2P33552 79 aa8.38□□□□□ -1.07
SKA2-204ENST00000578519 RNASE4P34096 147 aaKnown RBP8.38□□□□□ -1.07
SKA2-204ENST00000578519 TFPI2P48307 235 aa8.38□□□□□ -1.07
SKA2-204ENST00000578519 PKIAP61925 76 aa8.38□□□□□ -1.07
SKA2-204ENST00000578519 ZFAND2AQ8N6M9 145 aa8.38□□□□□ -1.07
SKA2-204ENST00000578519 PRELID3AQ96N28 172 aa8.38□□□□□ -1.07
SKA2-204ENST00000578519 NAGKQ9UJ70 344 aa8.38□□□□□ -1.07
SKA2-204ENST00000578519 IGKV3D-20A0A0C4DH25 116 aa8.37□□□□□ -1.07
SKA2-204ENST00000578519 A0A0J9YX75 114 aa8.37□□□□□ -1.07
SKA2-204ENST00000578519 NUPR1O60356 82 aa8.37□□□□□ -1.07
SKA2-204ENST00000578519 ZNF688P0C7X2 276 aa8.37□□□□□ -1.07
SKA2-204ENST00000578519 PRB4P10163 310 aaPredicted RBP8.37□□□□□ -1.07
SKA2-204ENST00000578519 SLURP1P55000 103 aa8.37□□□□□ -1.07
SKA2-204ENST00000578519 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
SKA2-204ENST00000578519 U3KQK5 164 aa8.37□□□□□ -1.07
SKA2-204ENST00000578519 A0A1B0GUS0 222 aa8.36□□□□□ -1.07
SKA2-204ENST00000578519 C20orf202A1L168 122 aa8.36□□□□□ -1.07
SKA2-204ENST00000578519 C7orf71A4D174 169 aa8.36□□□□□ -1.07
SKA2-204ENST00000578519 KLLNB2CW77 178 aa8.36□□□□□ -1.07
SKA2-204ENST00000578519 CCL24O00175 119 aa8.36□□□□□ -1.07
SKA2-204ENST00000578519 PPP1R17O96001 155 aa8.36□□□□□ -1.07
SKA2-204ENST00000578519 PMCHL1Q16048 86 aa8.36□□□□□ -1.07
SKA2-204ENST00000578519 Q71RC1 249 aaPredicted RBP8.36□□□□□ -1.07
SKA2-204ENST00000578519 MAP1LC3AQ9H492 121 aa8.36□□□□□ -1.07
SKA2-204ENST00000578519 ESM1Q9NQ30 184 aa8.36□□□□□ -1.07
SKA2-204ENST00000578519 SIGLEC8Q9NYZ4 499 aa8.36□□□□□ -1.07
SKA2-204ENST00000578519 PHLDA3Q9Y5J5 127 aa8.36□□□□□ -1.07
SKA2-204ENST00000578519 ANKRD17O75179 2603 aaKnown RBP8.36□□□□□ -1.07
SKA2-204ENST00000578519 ZFYVE26Q68DK2 2539 aa8.35□□□□□ -1.07
SKA2-204ENST00000578519 CSN3P07498 182 aa8.35□□□□□ -1.07
SKA2-204ENST00000578519 CDKN1BP46527 198 aa8.35□□□□□ -1.07
SKA2-204ENST00000578519 LINC00310P59036 64 aa8.35□□□□□ -1.07
SKA2-204ENST00000578519 KRTDAPP60985 99 aa8.35□□□□□ -1.07
SKA2-204ENST00000578519 MRPL51Q4U2R6 128 aaKnown RBP8.35□□□□□ -1.07
SKA2-204ENST00000578519 OR10AG1Q8NH19 301 aa8.35□□□□□ -1.07
SKA2-204ENST00000578519 LINC01006Q8NI28 216 aa8.35□□□□□ -1.07
SKA2-204ENST00000578519 RCHY1Q96PM5 261 aa8.35□□□□□ -1.07
SKA2-204ENST00000578519 SPAG8Q99932 426 aaPredicted RBP8.35□□□□□ -1.07
SKA2-204ENST00000578519 GSN-AS1Q9NRJ2 163 aa8.35□□□□□ -1.07
SKA2-204ENST00000578519 AP5S1Q9NUS5 200 aa8.35□□□□□ -1.07
SKA2-204ENST00000578519 NAV2Q8IVL1 2488 aa8.35□□□□□ -1.07
SKA2-204ENST00000578519 D6R8Y8 96 aa8.34□□□□□ -1.07
SKA2-204ENST00000578519 F6UB75 175 aa8.34□□□□□ -1.07
SKA2-204ENST00000578519 J3KRW8 73 aa8.34□□□□□ -1.07
SKA2-204ENST00000578519 TCF21O43680 179 aa8.34□□□□□ -1.07
SKA2-204ENST00000578519 LEPROTL1O95214 131 aa8.34□□□□□ -1.07
SKA2-204ENST00000578519 BTF3P20290 206 aaKnown RBP8.34□□□□□ -1.07
SKA2-204ENST00000578519 SSTP61278 116 aa8.34□□□□□ -1.07
SKA2-204ENST00000578519 ANXA2RQ3ZCQ2 193 aa8.34□□□□□ -1.07
SKA2-204ENST00000578519 AMN1Q8IY45 258 aa8.34□□□□□ -1.07
SKA2-204ENST00000578519 SYT8Q8NBV8 401 aa8.34□□□□□ -1.07
SKA2-204ENST00000578519 DLX4Q92988 240 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms