RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 C5orf17Q8NAS9 161 aa0.83□□□□□ -2.28
COPS3-213ENST00000577210 PLPP5Q8NEB5 264 aa0.83□□□□□ -2.28
COPS3-213ENST00000577210 MAGOHBQ96A72 148 aaKnown RBP0.83□□□□□ -2.28
COPS3-213ENST00000577210 TCEAL4Q96EI5 215 aa0.83□□□□□ -2.28
COPS3-213ENST00000577210 ODF3Q96PU9 254 aa0.83□□□□□ -2.28
COPS3-213ENST00000577210 PFDN5Q99471 154 aa0.83□□□□□ -2.28
COPS3-213ENST00000577210 TSC22D3Q99576 134 aa0.83□□□□□ -2.28
COPS3-213ENST00000577210 TPT1P8Q9HAU6 139 aa0.83□□□□□ -2.28
COPS3-213ENST00000577210 METTL1Q9UBP6 276 aaKnown RBP0.83□□□□□ -2.28
COPS3-213ENST00000577210 CR1P17927 2039 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 OVOS2A0A0J9YW53 1432 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 SOGA1O94964 1423 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 OVOS2Q6IE36 1432 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 TRAV17A0A0B4J275 112 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 PNMA8CA0A1B0GUJ8 204 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 M0R2N4 97 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 IGKCP01834 107 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 TFF1P04155 84 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 HMGN1P05114 100 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 MPC1LP0DKB6 136 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 CCL4P13236 92 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 HLA-DRB4P13762 266 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 AKR1D1P51857 326 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 RPL37AP61513 92 aaKnown RBP0.82□□□□□ -2.28
COPS3-213ENST00000577210 QRFPP83859 136 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 CCDC58Q4VC31 144 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 TMEM91Q6ZNR0 172 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 C3orf62Q6ZUJ4 267 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 SNX29P2Q8IUI4 249 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 C10orf111Q8N326 155 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 OR4S1Q8NGB4 309 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 MRPL57Q9BQC6 102 aaKnown RBP0.82□□□□□ -2.28
COPS3-213ENST00000577210 VPS25Q9BRG1 176 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 MPC1Q9Y5U8 109 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 HLA-DRB4X5D2U9 266 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 CCDC171Q6TFL3 1326 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 ADGRB2O60241 1585 aa0.82□□□□□ -2.28
COPS3-213ENST00000577210 MYOFQ9NZM1 2061 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 IGLV3-32A0A0A0MS00 114 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 IFITM5A6NNB3 132 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 ZNF727A8MUV8 499 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 J3QR89 54 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 IGLV3-1P01715 115 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 RBP4P02753 201 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 IGLC6P0CF74 106 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 LINC00694P0DN24 101 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 ADCYAP1P18509 176 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 DNAJB13P59910 316 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 NCS1P62166 190 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 CSAG1Q6PB30 78 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 CTAGE3PQ8IX95 158 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 MMGT1Q8N4V1 131 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 TCTEX1D1Q8N7M0 179 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 LSM2Q9Y333 95 aaKnown RBP0.81□□□□□ -2.28
COPS3-213ENST00000577210 DNAJC15Q9Y5T4 150 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 PLXNA4Q9HCM2 1894 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 RP1P56715 2156 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 FREM1Q5H8C1 2179 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 WDR97A6NE52 1622 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 LRP5O75197 1615 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 FCGBPQ9Y6R7 5405 aaPredicted RBP0.81□□□□□ -2.28
COPS3-213ENST00000577210 PEAK1Q9H792 1746 aa0.81□□□□□ -2.28
COPS3-213ENST00000577210 PRG4Q92954 1404 aaPredicted RBP0.81□□□□□ -2.28
COPS3-213ENST00000577210 ERCC6Q03468 1493 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 MCM3APO60318 1980 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 PCDH15Q96QU1 1955 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 A0A1W2PPB8 328 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 A0A1W2PRS3 328 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 A6NN06 94 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 KIR3DP1A8MWS1 328 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 NCR3O14931 201 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 EVI2AP22794 236 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 SPATA45Q537H7 98 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 OCIAD2Q56VL3 154 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 UNQ5815/PRO19632Q6UWF5 114 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 IZUMO2Q6UXV1 221 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 IDO2Q6ZQW0 420 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 LINC00299Q6ZSB3 139 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 NOP16Q9Y3C1 178 aaKnown RBP0.8□□□□□ -2.28
COPS3-213ENST00000577210 CPDO75976 1380 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 RTTNQ86VV8 2226 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 SIP14410 1827 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 KIAA1549LQ6ZVL6 1849 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 DISP2A7MBM2 1401 aa0.8□□□□□ -2.28
COPS3-213ENST00000577210 CDK12Q9NYV4 1490 aaPredicted RBP0.8□□□□□ -2.28
COPS3-213ENST00000577210 SORL1Q92673 2214 aa0.79□□□□□ -2.28
COPS3-213ENST00000577210 POLEQ07864 2286 aa0.79□□□□□ -2.28
COPS3-213ENST00000577210 TMEM30CPA0ZSE6 113 aa0.79□□□□□ -2.28
COPS3-213ENST00000577210 NUPR2A6NF83 97 aa0.79□□□□□ -2.28
COPS3-213ENST00000577210 ZNF670-ZNF695F2Z2N8 137 aa0.79□□□□□ -2.28
COPS3-213ENST00000577210 POLR2JP52435 117 aaKnown RBP0.79□□□□□ -2.28
COPS3-213ENST00000577210 RPS25P62851 125 aaKnown RBP0.79□□□□□ -2.28
COPS3-213ENST00000577210 PLGLB1Q02325 96 aa0.79□□□□□ -2.28
COPS3-213ENST00000577210 Q86TA4 180 aa0.79□□□□□ -2.28
COPS3-213ENST00000577210 LINC00526Q96FQ7 95 aa0.79□□□□□ -2.28
COPS3-213ENST00000577210 BOKQ9UMX3 212 aaPredicted RBP0.79□□□□□ -2.28
COPS3-213ENST00000577210 ALPK3Q96L96 1907 aa0.79□□□□□ -2.28
COPS3-213ENST00000577210 MYOM3Q5VTT5 1437 aa0.79□□□□□ -2.28
COPS3-213ENST00000577210 MUC6Q6W4X9 2439 aa0.78□□□□□ -2.28
COPS3-213ENST00000577210 J3QLW9 94 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms