RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RNASEKQ6P5S7 137 aaKnown RBP4.34□□□□□ -1.71
NUP88-212ENST00000576708 BOD1L2Q8IYS8 172 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.34□□□□□ -1.71
NUP88-212ENST00000576708 OR2D3Q8NGH3 330 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 ZNRF2Q8NHG8 242 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 RPUSD4Q96CM3 377 aaKnown RBP4.34□□□□□ -1.71
NUP88-212ENST00000576708 SDHCQ99643 169 aaPredicted RBP4.34□□□□□ -1.71
NUP88-212ENST00000576708 ATG101Q9BSB4 218 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 RBM38Q9H0Z9 239 aaKnown RBP4.34□□□□□ -1.71
NUP88-212ENST00000576708 ARV1Q9H2C2 271 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 NPVFQ9HCQ7 196 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 NOP10Q9NPE3 64 aaKnown RBP4.34□□□□□ -1.71
NUP88-212ENST00000576708 GSKIPQ9P0R6 139 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 LINC00588Q9Y4M8 146 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 LRP1BQ9NZR2 4599 aa4.34□□□□□ -1.71
NUP88-212ENST00000576708 A0A087X0K7 114 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 TRAV5A0A0B4J249 113 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 GAGE12JA6NER3 117 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 SLC17A3O00476 420 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 RS1O15537 224 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 ATP5G1P05496 136 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 TSPOP30536 169 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 BTCP35070 178 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 ATP5G3P48201 142 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 INPP1P49441 399 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 SELENOTP62341 195 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 DLK1P80370 383 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 FLI1Q01543 452 aaPredicted RBP4.33□□□□□ -1.72
NUP88-212ENST00000576708 SOHLH1Q5JUK2 328 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 TRIQKQ629K1 86 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 C15orf53Q8NAA6 179 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 MGST2Q99735 147 aa4.33□□□□□ -1.72
NUP88-212ENST00000576708 ZNF331Q9NQX6 463 aaPredicted RBP4.33□□□□□ -1.72
NUP88-212ENST00000576708 RCL1Q9Y2P8 373 aaKnown RBP4.33□□□□□ -1.72
NUP88-212ENST00000576708 APOBP04114 4563 aaKnown RBP4.33□□□□□ -1.72
NUP88-212ENST00000576708 A0A0J9YY99 117 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 NBDYA0A0U1RRE5 68 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 C7orf66A4D0T2 115 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 F8W036 122 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 H3BQ15 152 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 K7EPK0 472 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 GOSR2O14653 212 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 AGPAT2O15120 278 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 S100A7P31151 101 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 OR5I1Q13606 314 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 OPCMLQ14982 345 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 TWIST1Q15672 202 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 GUK1Q16774 197 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 GFI1BQ5VTD9 330 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 FAM159AQ6UWV7 190 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 LINC00305Q7Z4B0 112 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 OR10P1Q8NGE3 313 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 DEDD2Q8WXF8 326 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 TMEM37Q8WXS4 190 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 URB1-AS1Q96HZ7 61 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 PTTG2Q9NZH5 202 aa4.32□□□□□ -1.72
NUP88-212ENST00000576708 CSDC2Q9Y534 153 aaKnown RBP4.32□□□□□ -1.72
NUP88-212ENST00000576708 TRAV12-3A0A0B4J271 114 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 NAP1L6A6NFF2 107 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 FAM24AA6NFZ4 105 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 C16orf90A8MZG2 172 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 PLA2G10O15496 165 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 COX7A2P2O60397 106 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 GAGE7O76087 117 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 CST7O76096 145 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 LINC00614P0C842 121 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 GAGE12FP0CL80 117 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 GAGE12GP0CL81 117 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 GAGE12IP0CL82 117 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 CT45A10P0DMU9 189 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 IGLC2P0DOY2 106 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 IL7P13232 177 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 TAS2R30P59541 319 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 RBX1P62877 108 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 HERV-K104P63124 156 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 ERCC8Q13216 396 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 C10orf113Q5VZT2 155 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 MIC13Q5XKP0 118 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 SSX7Q7RTT5 188 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 ZNF546Q86UE3 836 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 ZFP82Q8N141 532 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 TMEM256Q8N2U0 113 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 C6orf223Q8N319 242 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 TMEM18Q96B42 140 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 C16orf74Q96GX8 76 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 KRTAP1-5Q9BYS1 174 aa4.31□□□□□ -1.72
NUP88-212ENST00000576708 LSM5Q9Y4Y9 91 aaKnown RBP4.31□□□□□ -1.72
NUP88-212ENST00000576708 TIMM8BQ9Y5J9 83 aaPredicted RBP4.31□□□□□ -1.72
NUP88-212ENST00000576708 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 A0A1W2PPQ1 181 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 CENPXA8MT69 81 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 FNDC10F2Z333 226 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 H7BYZ3 331 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 M0R3E3 92 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 CCL18P55774 89 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 CLINT1Q14677 625 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 ESRGQ1W209 222 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 COX19Q49B96 90 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 C6orf226Q5I0X4 101 aa4.3□□□□□ -1.72
NUP88-212ENST00000576708 LCN15Q6UWW0 184 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms