RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 MAPK1IP1LQ8NDC0 245 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 OR8A1Q8NGG7 326 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 PRSS3P2Q8NHM4 247 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 DPF1Q92782 380 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 AP5S1Q9NUS5 200 aa5.18□□□□□ -1.58
SMG6-217ENST00000575338 SPTAN1Q13813 2472 aaKnown RBP5.18□□□□□ -1.58
SMG6-217ENST00000575338 IGHV4-4A0A075B6R2 117 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 A0A1B0GUS0 222 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 PRAC2D3DTV9 90 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 LINC01619G3V211 115 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 SNAI2O43623 268 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 CD5LO43866 347 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 NUPR1O60356 82 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 PPP1R17O96001 155 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 S100A4P26447 101 aaKnown RBP5.17□□□□□ -1.58
SMG6-217ENST00000575338 DDTP30046 118 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 CKS2P33552 79 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 ERCC8Q13216 396 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 EBLN2Q6P2I7 272 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 TEX43Q6ZNM6 134 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 Q6ZS46 218 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 Q6ZWC4 215 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 MRPL52Q86TS9 123 aaKnown RBP5.17□□□□□ -1.58
SMG6-217ENST00000575338 APRG1Q8IVJ8 170 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 OR10AG1Q8NH19 301 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 C4orf3Q8WVX3 66 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 PRELID3AQ96N28 172 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 RCHY1Q96PM5 261 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 JMJD8Q96S16 334 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 TMEM70Q9BUB7 260 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 MAP1LC3CQ9BXW4 147 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 MAP1LC3AQ9H492 121 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 TMEM160Q9NX00 188 aa5.17□□□□□ -1.58
SMG6-217ENST00000575338 TMEM213A2RRL7 107 aa5.16□□□□□ -1.58
SMG6-217ENST00000575338 FAM181BA6NEQ2 426 aa5.16□□□□□ -1.58
SMG6-217ENST00000575338 RPLP1P05386 114 aaKnown RBP5.16□□□□□ -1.58
SMG6-217ENST00000575338 ASIPP42127 132 aa5.16□□□□□ -1.58
SMG6-217ENST00000575338 ZNF80P51504 273 aaPredicted RBP5.16□□□□□ -1.58
SMG6-217ENST00000575338 TMEM95Q3KNT9 176 aa5.16□□□□□ -1.58
SMG6-217ENST00000575338 PSMG4Q5JS54 123 aa5.16□□□□□ -1.58
SMG6-217ENST00000575338 SPANXN1Q5VSR9 72 aa5.16□□□□□ -1.58
SMG6-217ENST00000575338 KRTAP1-3Q8IUG1 177 aa5.16□□□□□ -1.58
SMG6-217ENST00000575338 ZNF418Q8TF45 676 aaPredicted RBP5.16□□□□□ -1.58
SMG6-217ENST00000575338 C20orf144Q9BQM9 153 aa5.16□□□□□ -1.58
SMG6-217ENST00000575338 NXT2Q9NPJ8 142 aaKnown RBP5.16□□□□□ -1.58
SMG6-217ENST00000575338 U3KQK5 164 aa5.16□□□□□ -1.58
SMG6-217ENST00000575338 SPG11Q96JI7 2443 aa5.16□□□□□ -1.58
SMG6-217ENST00000575338 FLNCQ14315 2725 aa5.16□□□□□ -1.58
SMG6-217ENST00000575338 TENM4Q6N022 2769 aa5.16□□□□□ -1.58
SMG6-217ENST00000575338 KIR2DL5BA0A0G2JN68 375 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 KIR2DL5BA0A0G2JPC4 375 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 LINC01549A6NIU2 74 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 HSBP1L1C9JCN9 74 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 D6R8Y8 96 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 K7EMI3 77 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 CRXO43186 299 aaPredicted RBP5.15□□□□□ -1.59
SMG6-217ENST00000575338 TCF21O43680 179 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 C3orf79P0CE67 100 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 G0S2P27469 103 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 HOXD3P31249 432 aaPredicted RBP5.15□□□□□ -1.59
SMG6-217ENST00000575338 MRPL51Q4U2R6 128 aaKnown RBP5.15□□□□□ -1.59
SMG6-217ENST00000575338 PET117Q6UWS5 81 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 FAM159AQ6UWV7 190 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 AMN1Q8IY45 258 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 KIR2DL5AQ8N109 375 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 FAM19A2Q8N3H0 131 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 ZNF664Q8N3J9 261 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 DCANP1Q8TF63 244 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 MRAP2Q96G30 205 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 FAM19A4Q96LR4 140 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 NDUFAF3Q9BU61 184 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 MS4A6AQ9H2W1 248 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 PHLDA3Q9Y5J5 127 aa5.15□□□□□ -1.59
SMG6-217ENST00000575338 IGHV4OR15-8A0A075B7B6 117 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 A0A087WW49 117 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 IGKV3D-20A0A0C4DH25 116 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 IGHV1-24A0A0C4DH33 117 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 C2orf70A6NJV1 201 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 LINC00587B1AMM8 73 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 KLLNB2CW77 178 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 K7EQG2 157 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 SMIM17P0DL12 118 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 CMC4P56277 68 aaPredicted RBP5.14□□□□□ -1.59
SMG6-217ENST00000575338 SYNJ2BPP57105 145 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 FOXI2Q6ZQN5 318 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 LCNL1Q6ZST4 164 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 ZFAND2AQ8N6M9 145 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 SYT8Q8NBV8 401 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 WFDC11Q8NEX6 87 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 DYNLRB2Q8TF09 96 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 C20orf173Q96LM9 149 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 AP1S3Q96PC3 154 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 CSPG4Q6UVK1 2322 aa5.14□□□□□ -1.59
SMG6-217ENST00000575338 COL12A1Q99715 3063 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 IGKV3-7A0A075B6H7 116 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 TRAV25A0A0B4J276 109 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 A0A0J9YX75 114 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 C7orf71A4D174 169 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 DNAJC9-AS1A6NH13 148 aa5.13□□□□□ -1.59
SMG6-217ENST00000575338 HBDP02042 147 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms