RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 CGB1A6NKQ9 187 aa7.54□□□□□ -1.2
CCDC40-212ENST00000574799 EFNA4P52798 201 aa7.54□□□□□ -1.2
CCDC40-212ENST00000574799 IGFL4Q6B9Z1 124 aa7.54□□□□□ -1.2
CCDC40-212ENST00000574799 TRBV19A0A075B6N1 114 aa7.54□□□□□ -1.2
CCDC40-212ENST00000574799 HLA-DRB4P13762 266 aa7.54□□□□□ -1.2
CCDC40-212ENST00000574799 COX7A1P24310 79 aa7.54□□□□□ -1.2
CCDC40-212ENST00000574799 ONECUT1Q9UBC0 465 aa7.54□□□□□ -1.2
CCDC40-212ENST00000574799 HLA-DRB4X5D2U9 266 aa7.54□□□□□ -1.2
CCDC40-212ENST00000574799 UTP20O75691 2785 aaKnown RBP7.53□□□□□ -1.2
CCDC40-212ENST00000574799 J3KRW8 73 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 HES1Q14469 280 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 TAL2Q16559 108 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 FBXL15Q9H469 300 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 GAGE12JA6NER3 117 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 GAGE7O76087 117 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 GAGE12FP0CL80 117 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 GAGE12GP0CL81 117 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 GAGE12IP0CL82 117 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 GAGE4Q13068 117 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 PRR30Q53SZ7 412 aaPredicted RBP7.53□□□□□ -1.2
CCDC40-212ENST00000574799 RNF125Q96EQ8 232 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 PIEZO1Q92508 2521 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 ZNF469Q96JG9 3925 aaPredicted RBP7.53□□□□□ -1.2
CCDC40-212ENST00000574799 LHBP01229 141 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 ZNF688P0C7X2 276 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 TMEM78Q5T7P6 136 aa7.53□□□□□ -1.2
CCDC40-212ENST00000574799 NOTCH2Q04721 2471 aa7.52□□□□□ -1.21
CCDC40-212ENST00000574799 LAGE3Q14657 143 aa7.52□□□□□ -1.21
CCDC40-212ENST00000574799 LINC00312Q9Y6C7 94 aa7.52□□□□□ -1.21
CCDC40-212ENST00000574799 NCOR2Q9Y618 2525 aa7.52□□□□□ -1.21
CCDC40-212ENST00000574799 MYMXA0A1B0GTQ4 84 aa7.52□□□□□ -1.21
CCDC40-212ENST00000574799 PLNP26678 52 aa7.52□□□□□ -1.21
CCDC40-212ENST00000574799 C5orf64Q2M2E5 130 aa7.52□□□□□ -1.21
CCDC40-212ENST00000574799 C9JAW5 83 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 EGR2P11161 476 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-212ENST00000574799 S100A4P26447 101 aaKnown RBP7.51□□□□□ -1.21
CCDC40-212ENST00000574799 CRIP1P50238 77 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 C3orf36Q3SXR2 165 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 ZFP2Q6ZN57 461 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 TEN1Q86WV5 123 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 AKAP6Q13023 2319 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 HERVK_113P61574 105 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 SRSF1Q07955 248 aaKnown RBP eCLIP7.51□□□□□ -1.21
CCDC40-212ENST00000574799 ZNF493Q6ZR52 646 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 PHLDA1Q8WV24 401 aaPredicted RBP7.51□□□□□ -1.21
CCDC40-212ENST00000574799 KIR2DL4Q99706 377 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 HHLA3Q9XRX5 114 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 CFAP46Q8IYW2 2715 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 IGLV3-9A0A075B6K5 115 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 TRAV26-2A0A0B4J265 109 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 A0A0G2JNJ9 132 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 TRBV7-9A0A0J9YWB2 115 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 IGLV2-11P01706 119 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 THBDP07204 575 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 RUSC1-AS1Q66K80 236 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 SHISA2Q6UWI4 295 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 GAFA1Q96PS6 74 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 Q9UFV3 132 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 SPTBN4Q9H254 2564 aa7.51□□□□□ -1.21
CCDC40-212ENST00000574799 WI2-2373I1.2A0A1W2PRP0 233 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 FABP5P3A8MUU1 101 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 SHISA9B4DS77 424 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 H7C1H1 209 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 FAM27E3Q08E93 113 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 DEFB104AQ8WTQ1 72 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 RAX2Q96IS3 184 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 CACNA1AO00555 2505 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 TLN1Q9Y490 2541 aaKnown RBP7.5□□□□□ -1.21
CCDC40-212ENST00000574799 MGPP08493 103 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 CNTFRP26992 372 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 EMP1P54849 157 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 TMEM30BQ3MIR4 351 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 ZNF833PQ6ZTB9 187 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 SHANK2-AS3Q9BTD1 123 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 MYO18BQ8IUG5 2567 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 IGHV3-23P01764 117 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 CR1LQ2VPA4 569 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 LINC01559Q495D7 138 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 SIGLEC15Q6ZMC9 328 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 PCNX1Q96RV3 2341 aa7.5□□□□□ -1.21
CCDC40-212ENST00000574799 GAS8-AS1O95177 125 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 CGB3P0DN86 165 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 CGB7P0DN87 165 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 SLC25A16P16260 332 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 TMEM155Q4W5P6 130 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 PPP1R27Q86WC6 154 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 C3orf56Q8N813 242 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 FAM57AQ8TBR7 257 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 PRADC1Q9BSG0 188 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 CDIP1Q9H305 208 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 TMEM14CQ9P0S9 112 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 DYNLRB1Q9NP97 96 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 IGHV3OR16-13A0A075B7E8 117 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 A0A087WX48 190 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 IGHV3-74A0A0B4J1X5 117 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 IGHV4-39P01824 125 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 IFITM1P13164 125 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 GLRXP35754 106 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 TMEM170BQ5T4T1 132 aa7.49□□□□□ -1.21
CCDC40-212ENST00000574799 NFE4Q86UQ8 179 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms