RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 PGPA6NDG6 321 aa13.7□□□□□ -0.22
SCARF1-208ENST00000574545 ARL6IP6Q8N6S5 226 aa13.7□□□□□ -0.22
SCARF1-208ENST00000574545 TMED6Q8WW62 240 aa13.7□□□□□ -0.22
SCARF1-208ENST00000574545 ASB13Q8WXK3 278 aa13.7□□□□□ -0.22
SCARF1-208ENST00000574545 ATG101Q9BSB4 218 aa13.7□□□□□ -0.22
SCARF1-208ENST00000574545 PSMG3Q9BT73 122 aaPredicted RBP13.7□□□□□ -0.22
SCARF1-208ENST00000574545 TMPRSS5Q9H3S3 457 aa13.7□□□□□ -0.22
SCARF1-208ENST00000574545 LINC00588Q9Y4M8 146 aa13.7□□□□□ -0.22
SCARF1-208ENST00000574545 LENEPQ9Y5L5 61 aa13.7□□□□□ -0.22
SCARF1-208ENST00000574545 MUC4Q99102 2169 aa13.7□□□□□ -0.22
SCARF1-208ENST00000574545 H3BNG1 76 aa13.69□□□□□ -0.22
SCARF1-208ENST00000574545 STAG3L2P0CL84 134 aa13.69□□□□□ -0.22
SCARF1-208ENST00000574545 STAG3L3P0CL85 134 aa13.69□□□□□ -0.22
SCARF1-208ENST00000574545 ATP6V0CP27449 155 aa13.69□□□□□ -0.22
SCARF1-208ENST00000574545 Q6AWC8 147 aa13.69□□□□□ -0.22
SCARF1-208ENST00000574545 HSD17B11Q8NBQ5 300 aa13.69□□□□□ -0.22
SCARF1-208ENST00000574545 SUN5Q8TC36 379 aa13.69□□□□□ -0.22
SCARF1-208ENST00000574545 GNPNAT1Q96EK6 184 aaPredicted RBP13.69□□□□□ -0.22
SCARF1-208ENST00000574545 RNF222A6NCQ9 220 aa13.68□□□□□ -0.22
SCARF1-208ENST00000574545 RGS13O14921 159 aa13.68□□□□□ -0.22
SCARF1-208ENST00000574545 HMGB3O15347 200 aaKnown RBP13.68□□□□□ -0.22
SCARF1-208ENST00000574545 CCL18P55774 89 aa13.68□□□□□ -0.22
SCARF1-208ENST00000574545 HYLS1Q96M11 299 aa13.68□□□□□ -0.22
SCARF1-208ENST00000574545 LRP1BQ9NZR2 4599 aa13.67□□□□□ -0.22
SCARF1-208ENST00000574545 TRGV1A0A0A0MS02 117 aa13.67□□□□□ -0.22
SCARF1-208ENST00000574545 A0A0J9YY99 117 aa13.67□□□□□ -0.22
SCARF1-208ENST00000574545 PRSS29PA6NIE9 313 aa13.67□□□□□ -0.22
SCARF1-208ENST00000574545 VSIG2Q96IQ7 327 aa13.67□□□□□ -0.22
SCARF1-208ENST00000574545 G3V3Q6 166 aa13.66□□□□□ -0.22
SCARF1-208ENST00000574545 CDC34P49427 236 aaPredicted RBP13.66□□□□□ -0.22
SCARF1-208ENST00000574545 SERF2P84101 59 aa13.66□□□□□ -0.22
SCARF1-208ENST00000574545 RAB24Q969Q5 203 aa13.66□□□□□ -0.22
SCARF1-208ENST00000574545 TVP23CQ96ET8 276 aa13.66□□□□□ -0.22
SCARF1-208ENST00000574545 TNFSF18Q9UNG2 199 aa13.66□□□□□ -0.22
SCARF1-208ENST00000574545 TRGV2A0A075B6R0 118 aa13.65□□□□□ -0.22
SCARF1-208ENST00000574545 ARL14EPLP0DKL9 152 aa13.65□□□□□ -0.22
SCARF1-208ENST00000574545 FAM74A1Q5RGS3 127 aa13.65□□□□□ -0.22
SCARF1-208ENST00000574545 SSX7Q7RTT5 188 aa13.65□□□□□ -0.22
SCARF1-208ENST00000574545 CMTM2Q8TAZ6 248 aa13.65□□□□□ -0.22
SCARF1-208ENST00000574545 NBDYA0A0U1RRE5 68 aa13.64□□□□□ -0.23
SCARF1-208ENST00000574545 ESRGQ1W209 222 aa13.64□□□□□ -0.23
SCARF1-208ENST00000574545 MUC21Q5SSG8 566 aa13.64□□□□□ -0.23
SCARF1-208ENST00000574545 GOLT1AQ6ZVE7 132 aa13.64□□□□□ -0.23
SCARF1-208ENST00000574545 ST6GAL2Q96JF0 529 aa13.64□□□□□ -0.23
SCARF1-208ENST00000574545 ARPC5LQ9BPX5 153 aa13.64□□□□□ -0.23
SCARF1-208ENST00000574545 SH3BGRL3Q9H299 93 aa13.64□□□□□ -0.23
SCARF1-208ENST00000574545 MDFICQ9P1T7 246 aa13.64□□□□□ -0.23
SCARF1-208ENST00000574545 DNAH5Q8TE73 4624 aa13.63□□□□□ -0.23
SCARF1-208ENST00000574545 MBP02144 154 aa13.63□□□□□ -0.23
SCARF1-208ENST00000574545 TDRG1Q3Y452 100 aa13.63□□□□□ -0.23
SCARF1-208ENST00000574545 C1orf134Q5TEV5 83 aa13.63□□□□□ -0.23
SCARF1-208ENST00000574545 RPL7L1Q6DKI1 246 aaKnown RBP13.63□□□□□ -0.23
SCARF1-208ENST00000574545 OR2T35Q8NGX2 323 aa13.63□□□□□ -0.23
SCARF1-208ENST00000574545 MRPL16Q9NX20 251 aaKnown RBP13.63□□□□□ -0.23
SCARF1-208ENST00000574545 A0A096LPF7 62 aa13.62□□□□□ -0.23
SCARF1-208ENST00000574545 TRAV8-1A0A0A6YYK1 113 aa13.62□□□□□ -0.23
SCARF1-208ENST00000574545 GCHFRP30047 84 aa13.62□□□□□ -0.23
SCARF1-208ENST00000574545 GNG5P63218 68 aa13.62□□□□□ -0.23
SCARF1-208ENST00000574545 ZNF415Q09FC8 603 aa13.62□□□□□ -0.23
SCARF1-208ENST00000574545 RGS21Q2M5E4 152 aa13.62□□□□□ -0.23
SCARF1-208ENST00000574545 INO80EQ8NBZ0 244 aaPredicted RBP13.62□□□□□ -0.23
SCARF1-208ENST00000574545 UPK3BQ9BT76 320 aa13.62□□□□□ -0.23
SCARF1-208ENST00000574545 RPH3ALQ9UNE2 315 aa13.62□□□□□ -0.23
SCARF1-208ENST00000574545 RYR1P21817 5038 aa13.61□□□□□ -0.23
SCARF1-208ENST00000574545 Q9H8V8 135 aa13.61□□□□□ -0.23
SCARF1-208ENST00000574545 FXYD6-FXYD2A0A087WZ82 144 aa13.6□□□□□ -0.23
SCARF1-208ENST00000574545 FHL2Q14192 279 aa13.6□□□□□ -0.23
SCARF1-208ENST00000574545 SOHLH1Q5JUK2 328 aa13.6□□□□□ -0.23
SCARF1-208ENST00000574545 FAM159AQ6UWV7 190 aa13.6□□□□□ -0.23
SCARF1-208ENST00000574545 RASL10AQ92737 203 aa13.6□□□□□ -0.23
SCARF1-208ENST00000574545 ACTR3CQ9C0K3 210 aaPredicted RBP13.6□□□□□ -0.23
SCARF1-208ENST00000574545 TCRAP04437 139 aa13.59□□□□□ -0.23
SCARF1-208ENST00000574545 ZNF726P1Q15940 193 aa13.59□□□□□ -0.23
SCARF1-208ENST00000574545 TMEM183BQ1AE95 376 aa13.59□□□□□ -0.23
SCARF1-208ENST00000574545 TMEM183AQ8IXX5 376 aa13.59□□□□□ -0.23
SCARF1-208ENST00000574545 C5orf17Q8NAS9 161 aa13.59□□□□□ -0.23
SCARF1-208ENST00000574545 SPXQ9BT56 116 aa13.59□□□□□ -0.23
SCARF1-208ENST00000574545 TREM1Q9NP99 234 aa13.59□□□□□ -0.23
SCARF1-208ENST00000574545 TMEM167BQ9NRX6 74 aa13.59□□□□□ -0.23
SCARF1-208ENST00000574545 TRGV11A0A075B6L2 103 aa13.58□□□□□ -0.24
SCARF1-208ENST00000574545 SERTM2A0A1B0GWG4 89 aa13.58□□□□□ -0.24
SCARF1-208ENST00000574545 GNRH2O43555 120 aa13.58□□□□□ -0.24
SCARF1-208ENST00000574545 CXorf1O96002 111 aa13.58□□□□□ -0.24
SCARF1-208ENST00000574545 IGLV2-11P01706 119 aa13.58□□□□□ -0.24
SCARF1-208ENST00000574545 IGHV3-53P01767 116 aa13.58□□□□□ -0.24
SCARF1-208ENST00000574545 SGK494Q96LW2 274 aa13.58□□□□□ -0.24
SCARF1-208ENST00000574545 CYTL1Q9NRR1 136 aa13.58□□□□□ -0.24
SCARF1-208ENST00000574545 MRPS16Q9Y3D3 137 aaKnown RBP13.58□□□□□ -0.24
SCARF1-208ENST00000574545 BORCS7-ASMTA0A0B4J1R7 106 aa13.57□□□□□ -0.24
SCARF1-208ENST00000574545 TRAV21A0A0B4J279 112 aa13.57□□□□□ -0.24
SCARF1-208ENST00000574545 GGTLC3B5MD39 225 aa13.57□□□□□ -0.24
SCARF1-208ENST00000574545 F6UZH7 168 aa13.57□□□□□ -0.24
SCARF1-208ENST00000574545 CRYBA4P53673 196 aa13.57□□□□□ -0.24
SCARF1-208ENST00000574545 SUMO1P63165 101 aaKnown RBP13.57□□□□□ -0.24
SCARF1-208ENST00000574545 C6orf223Q8N319 242 aa13.57□□□□□ -0.24
SCARF1-208ENST00000574545 KRTAP1-5Q9BYS1 174 aa13.57□□□□□ -0.24
SCARF1-208ENST00000574545 PRO0255Q9UI72 69 aa13.57□□□□□ -0.24
SCARF1-208ENST00000574545 EPDR1Q9UM22 224 aa13.57□□□□□ -0.24
SCARF1-208ENST00000574545 IGHV3-16A0A0C4DH30 117 aa13.56□□□□□ -0.24
SCARF1-208ENST00000574545 PAX4O43316 350 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms