RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 SMIM13P0DJ93 91 aa12.49□□□□□ -0.41
USP43-204ENST00000573955 ZNF329Q86UD4 541 aa12.49□□□□□ -0.41
USP43-204ENST00000573955 MAPK1IP1LQ8NDC0 245 aa12.49□□□□□ -0.41
USP43-204ENST00000573955 SOX21Q9Y651 276 aaPredicted RBP12.49□□□□□ -0.41
USP43-204ENST00000573955 C20orf78Q9BR46 151 aa12.48□□□□□ -0.41
USP43-204ENST00000573955 MCRIP2Q9BUT9 160 aaKnown RBP12.48□□□□□ -0.41
USP43-204ENST00000573955 RNASE7Q9H1E1 156 aaKnown RBP12.48□□□□□ -0.41
USP43-204ENST00000573955 IZUMO1RA6ND01 250 aa12.48□□□□□ -0.41
USP43-204ENST00000573955 EGR2P11161 476 aaPredicted RBP12.48□□□□□ -0.41
USP43-204ENST00000573955 PRR31Q5SQ13 230 aa12.48□□□□□ -0.41
USP43-204ENST00000573955 TMUB1Q9BVT8 246 aa12.48□□□□□ -0.41
USP43-204ENST00000573955 OSTCQ9NRP0 149 aa12.48□□□□□ -0.41
USP43-204ENST00000573955 IGLV11-55A0A075B6I3 123 aa12.47□□□□□ -0.41
USP43-204ENST00000573955 IGHV1-24A0A0C4DH33 117 aa12.47□□□□□ -0.41
USP43-204ENST00000573955 LINC01548A6NM66 108 aa12.47□□□□□ -0.41
USP43-204ENST00000573955 BCL6BQ8N143 479 aaPredicted RBP12.47□□□□□ -0.41
USP43-204ENST00000573955 SLC25A39Q9BZJ4 359 aaPredicted RBP12.47□□□□□ -0.41
USP43-204ENST00000573955 SIGLEC8Q9NYZ4 499 aa12.47□□□□□ -0.41
USP43-204ENST00000573955 IL4P05112 153 aa12.47□□□□□ -0.41
USP43-204ENST00000573955 INSL3P51460 131 aa12.47□□□□□ -0.41
USP43-204ENST00000573955 SYT8Q8NBV8 401 aa12.47□□□□□ -0.41
USP43-204ENST00000573955 TEX15Q9BXT5 2789 aa12.47□□□□□ -0.41
USP43-204ENST00000573955 IGHV3-35A0A0C4DH35 117 aa12.46□□□□□ -0.41
USP43-204ENST00000573955 SMIM27A0A1W2PRY6 76 aa12.46□□□□□ -0.41
USP43-204ENST00000573955 PGPA6NDG6 321 aa12.46□□□□□ -0.41
USP43-204ENST00000573955 NPIPB5A8MRT5 1133 aa12.46□□□□□ -0.41
USP43-204ENST00000573955 SLC25A5P05141 298 aaKnown RBP12.46□□□□□ -0.41
USP43-204ENST00000573955 GP9P14770 177 aa12.46□□□□□ -0.41
USP43-204ENST00000573955 PAX8Q06710 450 aa12.46□□□□□ -0.41
USP43-204ENST00000573955 RASL11AQ6T310 242 aa12.46□□□□□ -0.41
USP43-204ENST00000573955 ATP6V0E1O15342 81 aa12.46□□□□□ -0.42
USP43-204ENST00000573955 CDIP1Q9H305 208 aa12.46□□□□□ -0.42
USP43-204ENST00000573955 IGHV3OR16-8A0A075B7F1 116 aa12.45□□□□□ -0.42
USP43-204ENST00000573955 PEX7O00628 323 aa12.45□□□□□ -0.42
USP43-204ENST00000573955 IGHV4-38-2P0DP08 117 aa12.45□□□□□ -0.42
USP43-204ENST00000573955 FGF6P10767 208 aa12.45□□□□□ -0.42
USP43-204ENST00000573955 Q6ZUT4 128 aa12.45□□□□□ -0.42
USP43-204ENST00000573955 WIPF2Q8TF74 440 aaPredicted RBP12.45□□□□□ -0.42
USP43-204ENST00000573955 URB1-AS1Q96HZ7 61 aa12.45□□□□□ -0.42
USP43-204ENST00000573955 G3V318 75 aa12.45□□□□□ -0.42
USP43-204ENST00000573955 OR4X2Q8NGF9 303 aa12.45□□□□□ -0.42
USP43-204ENST00000573955 OR9G4Q8NGQ1 327 aa12.45□□□□□ -0.42
USP43-204ENST00000573955 COX6B1P14854 86 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 CHCHD1Q96BP2 118 aaKnown RBP12.44□□□□□ -0.42
USP43-204ENST00000573955 IGF2BP2-AS1Q96M15 143 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 TM2D2Q9BX73 214 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 C21orf62Q9NYP8 219 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 NOTCH2Q04721 2471 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 IGHV1-69DA0A0B4J2H0 117 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 M0QXV9 152 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 IGLV2-8P01709 118 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 IGHV1-69P01742 117 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 OR5AL1P0C617 328 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 MFAP4P55083 255 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 ZNF491Q8N8L2 437 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 RNF125Q96EQ8 232 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 LINC00527Q9UJ94 153 aa12.44□□□□□ -0.42
USP43-204ENST00000573955 SONP18583 2426 aaKnown RBP12.44□□□□□ -0.42
USP43-204ENST00000573955 F8W735 103 aaPredicted RBP12.43□□□□□ -0.42
USP43-204ENST00000573955 C17orf77Q96MU5 243 aa12.43□□□□□ -0.42
USP43-204ENST00000573955 Q9H3A6 140 aa12.43□□□□□ -0.42
USP43-204ENST00000573955 C7orf69Q9H7B7 122 aa12.43□□□□□ -0.42
USP43-204ENST00000573955 VPREB3Q9UKI3 123 aa12.43□□□□□ -0.42
USP43-204ENST00000573955 CREBBPQ92793 2442 aa12.43□□□□□ -0.42
USP43-204ENST00000573955 PRRC2AP48634 2157 aaKnown RBP12.43□□□□□ -0.42
USP43-204ENST00000573955 IBA57Q5T440 356 aaKnown RBP12.43□□□□□ -0.42
USP43-204ENST00000573955 LINC01545Q5VT33 79 aa12.43□□□□□ -0.42
USP43-204ENST00000573955 EXOC3-AS1Q8N2X6 119 aa12.43□□□□□ -0.42
USP43-204ENST00000573955 GTSF1Q8WW33 167 aa12.43□□□□□ -0.42
USP43-204ENST00000573955 XGP55808 180 aa12.42□□□□□ -0.42
USP43-204ENST00000573955 LY6EQ16553 131 aa12.42□□□□□ -0.42
USP43-204ENST00000573955 EPDR1Q9UM22 224 aa12.42□□□□□ -0.42
USP43-204ENST00000573955 GAGE12JA6NER3 117 aa12.42□□□□□ -0.42
USP43-204ENST00000573955 GAGE7O76087 117 aa12.42□□□□□ -0.42
USP43-204ENST00000573955 GAGE12FP0CL80 117 aa12.42□□□□□ -0.42
USP43-204ENST00000573955 GAGE12GP0CL81 117 aa12.42□□□□□ -0.42
USP43-204ENST00000573955 GAGE12IP0CL82 117 aa12.42□□□□□ -0.42
USP43-204ENST00000573955 MYCNOSP40205 109 aa12.42□□□□□ -0.42
USP43-204ENST00000573955 GAGE4Q13068 117 aa12.42□□□□□ -0.42
USP43-204ENST00000573955 ZFAND6Q6FIF0 208 aa12.42□□□□□ -0.42
USP43-204ENST00000573955 ZNF502Q8TBZ5 544 aa12.42□□□□□ -0.42
USP43-204ENST00000573955 APOMO95445 188 aa12.41□□□□□ -0.42
USP43-204ENST00000573955 ACANP16112 2415 aa12.41□□□□□ -0.42
USP43-204ENST00000573955 MSMBP08118 114 aa12.41□□□□□ -0.42
USP43-204ENST00000573955 GAGE13Q4V321 117 aa12.41□□□□□ -0.42
USP43-204ENST00000573955 C5orf47Q569G3 176 aa12.41□□□□□ -0.42
USP43-204ENST00000573955 MXRA5Q9NR99 2828 aa12.41□□□□□ -0.42
USP43-204ENST00000573955 SMAD7O15105 426 aaKnown RBP12.41□□□□□ -0.42
USP43-204ENST00000573955 C15orf32Q32M92 178 aa12.41□□□□□ -0.42
USP43-204ENST00000573955 GDF5OSQ5U4N7 250 aa12.41□□□□□ -0.42
USP43-204ENST00000573955 TEX29Q8N6K0 151 aa12.41□□□□□ -0.42
USP43-204ENST00000573955 C5orf56Q8N8D9 126 aa12.41□□□□□ -0.42
USP43-204ENST00000573955 SHANK2-AS3Q9BTD1 123 aa12.41□□□□□ -0.42
USP43-204ENST00000573955 A0A087WX48 190 aa12.4□□□□□ -0.42
USP43-204ENST00000573955 FABP5P3A8MUU1 101 aa12.4□□□□□ -0.42
USP43-204ENST00000573955 H3BMG7 143 aa12.4□□□□□ -0.42
USP43-204ENST00000573955 SCGB2A1O75556 95 aa12.4□□□□□ -0.42
USP43-204ENST00000573955 TRAV8-1A0A0A6YYK1 113 aa12.4□□□□□ -0.43
USP43-204ENST00000573955 H3BRN7 92 aa12.4□□□□□ -0.43
USP43-204ENST00000573955 AVPP01185 164 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms