RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 A0A1W2PPQ1 181 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 KANTRA0A1W2PQU2 76 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 H3BNG1 76 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 STAG3L2P0CL84 134 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 STAG3L3P0CL85 134 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 ARL14EPLP0DKL9 152 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 RANP62826 216 aaKnown RBP8.47□□□□□ -1.05
CCDC40-210ENST00000573903 KIR3DS1Q14943 382 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 AKR1C8PQ5T2L2 129 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 KCNRGQ8N5I3 272 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 LINC00612Q8N6U2 182 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 CMTM2Q8TAZ6 248 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 RAB24Q969Q5 203 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 PYGO2Q9BRQ0 406 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 UPK3BQ9BT76 320 aa8.47□□□□□ -1.05
CCDC40-210ENST00000573903 TRGV2A0A075B6R0 118 aa8.46□□□□□ -1.06
CCDC40-210ENST00000573903 IGKV2-40A0A087WW87 121 aaPredicted RBP8.46□□□□□ -1.06
CCDC40-210ENST00000573903 HMGB3O15347 200 aaKnown RBP8.46□□□□□ -1.06
CCDC40-210ENST00000573903 BCL2L11O43521 198 aa8.46□□□□□ -1.06
CCDC40-210ENST00000573903 EIF3GO75821 320 aaKnown RBP eCLIP8.46□□□□□ -1.06
CCDC40-210ENST00000573903 CXorf1O96002 111 aa8.46□□□□□ -1.06
CCDC40-210ENST00000573903 IGKV2D-40P01614 121 aaPredicted RBP8.46□□□□□ -1.06
CCDC40-210ENST00000573903 HOXA5P20719 270 aa8.46□□□□□ -1.06
CCDC40-210ENST00000573903 Q6ZNX1 250 aa8.46□□□□□ -1.06
CCDC40-210ENST00000573903 ZNF680Q8NEM1 530 aa8.46□□□□□ -1.06
CCDC40-210ENST00000573903 LINC00477Q96M19 166 aa8.46□□□□□ -1.06
CCDC40-210ENST00000573903 OTORQ9NRC9 128 aa8.46□□□□□ -1.06
CCDC40-210ENST00000573903 MRPS16Q9Y3D3 137 aaKnown RBP8.46□□□□□ -1.06
CCDC40-210ENST00000573903 CTXND1A0A1B0GTU2 59 aa8.45□□□□□ -1.06
CCDC40-210ENST00000573903 RBAKDNA6NC62 111 aa8.45□□□□□ -1.06
CCDC40-210ENST00000573903 PFDN1O60925 122 aa8.45□□□□□ -1.06
CCDC40-210ENST00000573903 SLC25A5P05141 298 aaKnown RBP8.45□□□□□ -1.06
CCDC40-210ENST00000573903 CT45A10P0DMU9 189 aa8.45□□□□□ -1.06
CCDC40-210ENST00000573903 BTF3P20290 206 aaKnown RBP8.45□□□□□ -1.06
CCDC40-210ENST00000573903 EIF5AP63241 154 aaKnown RBP8.45□□□□□ -1.06
CCDC40-210ENST00000573903 DAZ2Q13117 558 aaKnown RBP8.45□□□□□ -1.06
CCDC40-210ENST00000573903 C9orf47Q6ZRZ4 202 aa8.45□□□□□ -1.06
CCDC40-210ENST00000573903 TMPRSS5Q9H3S3 457 aa8.45□□□□□ -1.06
CCDC40-210ENST00000573903 TMEM167BQ9NRX6 74 aa8.45□□□□□ -1.06
CCDC40-210ENST00000573903 GCHFRP30047 84 aa8.44□□□□□ -1.06
CCDC40-210ENST00000573903 ERCC8Q13216 396 aa8.44□□□□□ -1.06
CCDC40-210ENST00000573903 ESRGQ1W209 222 aa8.44□□□□□ -1.06
CCDC40-210ENST00000573903 Q6ZTI0 123 aa8.44□□□□□ -1.06
CCDC40-210ENST00000573903 IQCF2Q8IXL9 164 aa8.44□□□□□ -1.06
CCDC40-210ENST00000573903 TCTE3Q8IZS6 198 aa8.44□□□□□ -1.06
CCDC40-210ENST00000573903 OR11H4Q8NGC9 324 aa8.44□□□□□ -1.06
CCDC40-210ENST00000573903 ZNF471Q9BX82 626 aaPredicted RBP8.44□□□□□ -1.06
CCDC40-210ENST00000573903 KRTAP1-5Q9BYS1 174 aa8.44□□□□□ -1.06
CCDC40-210ENST00000573903 CYTL1Q9NRR1 136 aa8.44□□□□□ -1.06
CCDC40-210ENST00000573903 RPH3ALQ9UNE2 315 aa8.44□□□□□ -1.06
CCDC40-210ENST00000573903 TRBV7-9A0A0J9YWB2 115 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 C7orf71A4D174 169 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 PGPA6NDG6 321 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 DIRC3C9JPN6 131 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 NMBP08949 121 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 CRISP2P16562 243 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 ZNF138P52744 262 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 AKAP14Q86UN6 197 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 Q8N1X5 172 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 ARL6IP6Q8N6S5 226 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 ST6GAL2Q96JF0 529 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 HYLS1Q96M11 299 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 AGPAT4-IT1Q9H0P7 198 aa8.43□□□□□ -1.06
CCDC40-210ENST00000573903 RYR1P21817 5038 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 hCG_2014768A0A024R1R8 64 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 TRGV1A0A0A0MS02 117 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 SERTM2A0A1B0GWG4 89 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 KLLNB2CW77 178 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 EREGO14944 169 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 GPX1P07203 203 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 SEC11BP0C7V7 166 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 EIF4E3Q8N5X7 224 aaKnown RBP8.42□□□□□ -1.06
CCDC40-210ENST00000573903 C5orf17Q8NAS9 161 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 Q8TAT8 98 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 SUN5Q8TC36 379 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 TMED6Q8WW62 240 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 FAM19A4Q96LR4 140 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 VGLL1Q99990 258 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 SCRT2Q9NQ03 307 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 GSN-AS1Q9NRJ2 163 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 ZNF492Q9P255 531 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 LENEPQ9Y5L5 61 aa8.42□□□□□ -1.06
CCDC40-210ENST00000573903 MAP1LC3B2A6NCE7 125 aa8.41□□□□□ -1.06
CCDC40-210ENST00000573903 UMAD1C9J7I0 102 aa8.41□□□□□ -1.06
CCDC40-210ENST00000573903 K7EQM0 130 aa8.41□□□□□ -1.06
CCDC40-210ENST00000573903 SIVA1O15304 175 aa8.41□□□□□ -1.06
CCDC40-210ENST00000573903 TPT1P13693 172 aaKnown RBP8.41□□□□□ -1.06
CCDC40-210ENST00000573903 LINC00315P59091 139 aa8.41□□□□□ -1.06
CCDC40-210ENST00000573903 BTN1A1Q13410 526 aa8.41□□□□□ -1.06
CCDC40-210ENST00000573903 GOLT1AQ6ZVE7 132 aa8.41□□□□□ -1.06
CCDC40-210ENST00000573903 TMUB2Q71RG4 321 aa8.41□□□□□ -1.06
CCDC40-210ENST00000573903 STOML3Q8TAV4 291 aa8.41□□□□□ -1.06
CCDC40-210ENST00000573903 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
CCDC40-210ENST00000573903 MAP1LC3BQ9GZQ8 125 aa8.41□□□□□ -1.06
CCDC40-210ENST00000573903 ICOSQ9Y6W8 199 aa8.41□□□□□ -1.06
CCDC40-210ENST00000573903 A0A096LPF7 62 aa8.4□□□□□ -1.06
CCDC40-210ENST00000573903 RGS13O14921 159 aa8.4□□□□□ -1.06
CCDC40-210ENST00000573903 C1QBP02746 253 aa8.4□□□□□ -1.06
CCDC40-210ENST00000573903 RNASE4P34096 147 aaKnown RBP8.4□□□□□ -1.06
CCDC40-210ENST00000573903 ZNF726P1Q15940 193 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms