RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 UBE2DNLQ8IWF7 75 aa12.06□□□□□ -0.48
SMG6-212ENST00000573153 INO80EQ8NBZ0 244 aaPredicted RBP12.06□□□□□ -0.48
SMG6-212ENST00000573153 ZNRF2Q8NHG8 242 aa12.06□□□□□ -0.48
SMG6-212ENST00000573153 Q8TAT8 98 aa12.06□□□□□ -0.48
SMG6-212ENST00000573153 MUC4Q99102 2169 aa12.06□□□□□ -0.48
SMG6-212ENST00000573153 IGHV1OR15-1A0A075B7D0 117 aa12.05□□□□□ -0.48
SMG6-212ENST00000573153 G3V3Q6 166 aa12.05□□□□□ -0.48
SMG6-212ENST00000573153 H3BNG1 76 aa12.05□□□□□ -0.48
SMG6-212ENST00000573153 CDC34P49427 236 aaPredicted RBP12.05□□□□□ -0.48
SMG6-212ENST00000573153 FAM74A1Q5RGS3 127 aa12.05□□□□□ -0.48
SMG6-212ENST00000573153 Q6AWC8 147 aa12.05□□□□□ -0.48
SMG6-212ENST00000573153 OR2T35Q8NGX2 323 aa12.05□□□□□ -0.48
SMG6-212ENST00000573153 GSN-AS1Q9NRJ2 163 aa12.05□□□□□ -0.48
SMG6-212ENST00000573153 LRP1BQ9NZR2 4599 aa12.04□□□□□ -0.48
SMG6-212ENST00000573153 GAGE12BA1L429 117 aa12.04□□□□□ -0.48
SMG6-212ENST00000573153 PGPA6NDG6 321 aa12.04□□□□□ -0.48
SMG6-212ENST00000573153 RGS13O14921 159 aa12.04□□□□□ -0.48
SMG6-212ENST00000573153 SPINK4O60575 86 aa12.04□□□□□ -0.48
SMG6-212ENST00000573153 GAGE7O76087 117 aa12.04□□□□□ -0.48
SMG6-212ENST00000573153 GAGE12FP0CL80 117 aa12.04□□□□□ -0.48
SMG6-212ENST00000573153 GAGE12GP0CL81 117 aa12.04□□□□□ -0.48
SMG6-212ENST00000573153 GAGE12IP0CL82 117 aa12.04□□□□□ -0.48
SMG6-212ENST00000573153 Q6ZTI0 123 aa12.04□□□□□ -0.48
SMG6-212ENST00000573153 LINC00588Q9Y4M8 146 aa12.04□□□□□ -0.48
SMG6-212ENST00000573153 ARL14EPLP0DKL9 152 aa12.03□□□□□ -0.48
SMG6-212ENST00000573153 CMTM2Q8TAZ6 248 aa12.03□□□□□ -0.48
SMG6-212ENST00000573153 RAB24Q969Q5 203 aa12.03□□□□□ -0.48
SMG6-212ENST00000573153 GNPNAT1Q96EK6 184 aaPredicted RBP12.03□□□□□ -0.48
SMG6-212ENST00000573153 ST6GAL2Q96JF0 529 aa12.03□□□□□ -0.48
SMG6-212ENST00000573153 TP53TG3Q9ULZ0 132 aa12.03□□□□□ -0.48
SMG6-212ENST00000573153 FXYD6-FXYD2A0A087WZ82 144 aa12.02□□□□□ -0.49
SMG6-212ENST00000573153 PRSS29PA6NIE9 313 aa12.02□□□□□ -0.49
SMG6-212ENST00000573153 HYLS1Q96M11 299 aa12.02□□□□□ -0.49
SMG6-212ENST00000573153 SH3BGRL3Q9H299 93 aa12.02□□□□□ -0.49
SMG6-212ENST00000573153 TMPRSS5Q9H3S3 457 aa12.02□□□□□ -0.49
SMG6-212ENST00000573153 KLF12Q9Y4X4 402 aa12.02□□□□□ -0.49
SMG6-212ENST00000573153 TRAV26-1A0A087WT03 109 aa12.01□□□□□ -0.49
SMG6-212ENST00000573153 BORCS7-ASMTA0A0B4J1R7 106 aa12.01□□□□□ -0.49
SMG6-212ENST00000573153 SERTM2A0A1B0GWG4 89 aa12.01□□□□□ -0.49
SMG6-212ENST00000573153 HMGB3O15347 200 aaKnown RBP12.01□□□□□ -0.49
SMG6-212ENST00000573153 NUDT3O95989 172 aa12.01□□□□□ -0.49
SMG6-212ENST00000573153 TDRG1Q3Y452 100 aa12.01□□□□□ -0.49
SMG6-212ENST00000573153 RPL7L1Q6DKI1 246 aaKnown RBP12.01□□□□□ -0.49
SMG6-212ENST00000573153 KRTAP17-1Q9BYP8 105 aa12.01□□□□□ -0.49
SMG6-212ENST00000573153 DNAH5Q8TE73 4624 aa12□□□□□ -0.49
SMG6-212ENST00000573153 GCHFRP30047 84 aa12□□□□□ -0.49
SMG6-212ENST00000573153 OR5I1Q13606 314 aa12□□□□□ -0.49
SMG6-212ENST00000573153 GOLT1AQ6ZVE7 132 aa12□□□□□ -0.49
SMG6-212ENST00000573153 VSIG2Q96IQ7 327 aa12□□□□□ -0.49
SMG6-212ENST00000573153 ARPC5LQ9BPX5 153 aa12□□□□□ -0.49
SMG6-212ENST00000573153 ATG101Q9BSB4 218 aa12□□□□□ -0.49
SMG6-212ENST00000573153 KRTAP1-5Q9BYS1 174 aa12□□□□□ -0.49
SMG6-212ENST00000573153 ACTR3CQ9C0K3 210 aaPredicted RBP12□□□□□ -0.49
SMG6-212ENST00000573153 TRGV2A0A075B6R0 118 aa11.99□□□□□ -0.49
SMG6-212ENST00000573153 TRGV1A0A0A0MS02 117 aa11.99□□□□□ -0.49
SMG6-212ENST00000573153 TAAR5O14804 337 aa11.99□□□□□ -0.49
SMG6-212ENST00000573153 CXorf1O96002 111 aa11.99□□□□□ -0.49
SMG6-212ENST00000573153 CCL18P55774 89 aa11.99□□□□□ -0.49
SMG6-212ENST00000573153 ZNF415Q09FC8 603 aa11.99□□□□□ -0.49
SMG6-212ENST00000573153 C5orf17Q8NAS9 161 aa11.99□□□□□ -0.49
SMG6-212ENST00000573153 TMEM167BQ9NRX6 74 aa11.99□□□□□ -0.49
SMG6-212ENST00000573153 HSPG2P98160 4391 aa11.98□□□□□ -0.49
SMG6-212ENST00000573153 NBDYA0A0U1RRE5 68 aa11.98□□□□□ -0.49
SMG6-212ENST00000573153 SSX7Q7RTT5 188 aa11.98□□□□□ -0.49
SMG6-212ENST00000573153 TVP23CQ96ET8 276 aa11.98□□□□□ -0.49
SMG6-212ENST00000573153 ABCA13Q86UQ4 5058 aa11.98□□□□□ -0.49
SMG6-212ENST00000573153 TRAV8-1A0A0A6YYK1 113 aa11.97□□□□□ -0.49
SMG6-212ENST00000573153 A0A0J9YY99 117 aa11.97□□□□□ -0.49
SMG6-212ENST00000573153 TCRAP04437 139 aa11.97□□□□□ -0.49
SMG6-212ENST00000573153 GNG5P63218 68 aa11.97□□□□□ -0.49
SMG6-212ENST00000573153 SPXQ9BT56 116 aa11.97□□□□□ -0.49
SMG6-212ENST00000573153 APOBP04114 4563 aaKnown RBP11.96□□□□□ -0.49
SMG6-212ENST00000573153 TRGV11A0A075B6L2 103 aa11.96□□□□□ -0.49
SMG6-212ENST00000573153 A0A1W2PRE2 83 aa11.96□□□□□ -0.49
SMG6-212ENST00000573153 GGTLC3B5MD39 225 aa11.96□□□□□ -0.49
SMG6-212ENST00000573153 ZNF726P1Q15940 193 aa11.96□□□□□ -0.49
SMG6-212ENST00000573153 ESRGQ1W209 222 aa11.96□□□□□ -0.49
SMG6-212ENST00000573153 FAM159AQ6UWV7 190 aa11.96□□□□□ -0.49
SMG6-212ENST00000573153 UPK3BQ9BT76 320 aa11.96□□□□□ -0.49
SMG6-212ENST00000573153 CYTL1Q9NRR1 136 aa11.96□□□□□ -0.49
SMG6-212ENST00000573153 MDFICQ9P1T7 246 aa11.96□□□□□ -0.49
SMG6-212ENST00000573153 RPH3ALQ9UNE2 315 aa11.96□□□□□ -0.49
SMG6-212ENST00000573153 A0A096LPF7 62 aa11.95□□□□□ -0.5
SMG6-212ENST00000573153 TRAV21A0A0B4J279 112 aa11.95□□□□□ -0.5
SMG6-212ENST00000573153 CTXND1A0A1B0GTU2 59 aa11.95□□□□□ -0.5
SMG6-212ENST00000573153 FBLL1A6NHQ2 334 aaKnown RBP11.95□□□□□ -0.5
SMG6-212ENST00000573153 ZNF345Q14585 488 aa11.95□□□□□ -0.5
SMG6-212ENST00000573153 MUC21Q5SSG8 566 aa11.95□□□□□ -0.5
SMG6-212ENST00000573153 RASL10AQ92737 203 aa11.95□□□□□ -0.5
SMG6-212ENST00000573153 TREM1Q9NP99 234 aa11.95□□□□□ -0.5
SMG6-212ENST00000573153 MRPL16Q9NX20 251 aaKnown RBP11.95□□□□□ -0.5
SMG6-212ENST00000573153 K7EQM0 130 aa11.94□□□□□ -0.5
SMG6-212ENST00000573153 ARPC5O15511 151 aa11.94□□□□□ -0.5
SMG6-212ENST00000573153 IGLV2-11P01706 119 aa11.94□□□□□ -0.5
SMG6-212ENST00000573153 TNP2Q05952 138 aa11.94□□□□□ -0.5
SMG6-212ENST00000573153 SLAQ13239 276 aa11.94□□□□□ -0.5
SMG6-212ENST00000573153 TMEM183BQ1AE95 376 aa11.94□□□□□ -0.5
SMG6-212ENST00000573153 C1orf134Q5TEV5 83 aa11.94□□□□□ -0.5
SMG6-212ENST00000573153 IQCF2Q8IXL9 164 aa11.94□□□□□ -0.5
SMG6-212ENST00000573153 TMEM183AQ8IXX5 376 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms