RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 FAM19A4Q96LR4 140 aa6.33□□□□□ -1.4
NPLOC4-210ENST00000572824 VGLL1Q99990 258 aa6.33□□□□□ -1.4
NPLOC4-210ENST00000572824 TM2D2Q9BX73 214 aa6.33□□□□□ -1.4
NPLOC4-210ENST00000572824 SLC25A2Q9BXI2 301 aa6.33□□□□□ -1.4
NPLOC4-210ENST00000572824 AGPAT4-IT1Q9H0P7 198 aa6.33□□□□□ -1.4
NPLOC4-210ENST00000572824 Q9H8V8 135 aa6.33□□□□□ -1.4
NPLOC4-210ENST00000572824 BATF3Q9NR55 127 aa6.33□□□□□ -1.4
NPLOC4-210ENST00000572824 SLC39A9Q9NUM3 307 aa6.33□□□□□ -1.4
NPLOC4-210ENST00000572824 UQCC1Q9NVA1 299 aa6.33□□□□□ -1.4
NPLOC4-210ENST00000572824 MRPL16Q9NX20 251 aaKnown RBP6.33□□□□□ -1.4
NPLOC4-210ENST00000572824 PXMP4Q9Y6I8 212 aa6.33□□□□□ -1.4
NPLOC4-210ENST00000572824 DNAH8Q96JB1 4490 aa6.33□□□□□ -1.4
NPLOC4-210ENST00000572824 TRBV19A0A075B6N1 114 aa6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 RLN2P04090 185 aa6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 RNASE4P34096 147 aaKnown RBP6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 CCL18P55774 89 aa6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 FAM122CQ6P4D5 195 aa6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 Q6ZRN7 208 aaPredicted RBP6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 MIR17HGQ75NE6 70 aa6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 TMEM252Q8N6L7 170 aa6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 ZFAND2AQ8N6M9 145 aa6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 PHYHIPLQ96FC7 376 aa6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 FAM167A-AS1Q96KT0 104 aa6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 DNAJC4Q9NNZ3 241 aa6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 LYRM2Q9NU23 88 aaPredicted RBP6.32□□□□□ -1.4
NPLOC4-210ENST00000572824 TRGV1A0A0A0MS02 117 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 C7orf71A4D174 169 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 KLLNB2CW77 178 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 ZNF324O75467 553 aaPredicted RBP6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 OR10J4P0C629 311 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 DNAH10OSP0CZ25 163 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 SULT1A1P50225 295 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 LINC00315P59091 139 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 ZNF846Q147U1 533 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 PXDC1Q5TGL8 231 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 ZNF493Q6ZR52 646 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 C12orf45Q8N5I9 185 aaPredicted RBP6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 C2orf50Q96LR7 162 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 GGACTQ9BVM4 153 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 NPCDR1Q9BY65 106 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 Q9H3A6 140 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 GPN1Q9HCN4 374 aaPredicted RBP6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 OR5AC2Q9NZP5 309 aa6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 MRPS16Q9Y3D3 137 aaKnown RBP6.31□□□□□ -1.4
NPLOC4-210ENST00000572824 CENPXA8MT69 81 aa6.3□□□□□ -1.4
NPLOC4-210ENST00000572824 SNURFLB1AK76 121 aa6.3□□□□□ -1.4
NPLOC4-210ENST00000572824 CDK2AP2O75956 126 aa6.3□□□□□ -1.4
NPLOC4-210ENST00000572824 SFTA3P0C7M3 94 aa6.3□□□□□ -1.4
NPLOC4-210ENST00000572824 LEPP41159 167 aa6.3□□□□□ -1.4
NPLOC4-210ENST00000572824 RPL29P47914 159 aaKnown RBP6.3□□□□□ -1.4
NPLOC4-210ENST00000572824 PCP4P48539 62 aa6.3□□□□□ -1.4
NPLOC4-210ENST00000572824 HAMPP81172 84 aa6.3□□□□□ -1.4
NPLOC4-210ENST00000572824 LRRC37A5PQ49AS3 106 aa6.3□□□□□ -1.4
NPLOC4-210ENST00000572824 FUT9Q9Y231 359 aa6.3□□□□□ -1.4
NPLOC4-210ENST00000572824 FLG2Q5D862 2391 aaPredicted RBP6.3□□□□□ -1.4
NPLOC4-210ENST00000572824 MYCBP2O75592 4640 aa6.3□□□□□ -1.4
NPLOC4-210ENST00000572824 SPINK4O60575 86 aa6.29□□□□□ -1.4
NPLOC4-210ENST00000572824 S100A7P31151 101 aa6.29□□□□□ -1.4
NPLOC4-210ENST00000572824 IFITM3Q01628 133 aa6.29□□□□□ -1.4
NPLOC4-210ENST00000572824 DAZ2Q13117 558 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-210ENST00000572824 MUC21Q5SSG8 566 aa6.29□□□□□ -1.4
NPLOC4-210ENST00000572824 Q6ZRG5 221 aa6.29□□□□□ -1.4
NPLOC4-210ENST00000572824 FXYD5Q96DB9 178 aa6.29□□□□□ -1.4
NPLOC4-210ENST00000572824 ODF3Q96PU9 254 aa6.29□□□□□ -1.4
NPLOC4-210ENST00000572824 C20orf144Q9BQM9 153 aa6.29□□□□□ -1.4
NPLOC4-210ENST00000572824 PYGO2Q9BRQ0 406 aa6.29□□□□□ -1.4
NPLOC4-210ENST00000572824 UPK3BQ9BT76 320 aa6.29□□□□□ -1.4
NPLOC4-210ENST00000572824 TRGV2A0A075B6R0 118 aa6.28□□□□□ -1.4
NPLOC4-210ENST00000572824 NXPH4O95158 308 aa6.28□□□□□ -1.4
NPLOC4-210ENST00000572824 SLC25A5P05141 298 aaKnown RBP6.28□□□□□ -1.4
NPLOC4-210ENST00000572824 TCL1AP56279 114 aa6.28□□□□□ -1.4
NPLOC4-210ENST00000572824 ANXA2RQ3ZCQ2 193 aa6.28□□□□□ -1.4
NPLOC4-210ENST00000572824 EIF4E3Q8N5X7 224 aaKnown RBP6.28□□□□□ -1.4
NPLOC4-210ENST00000572824 OR5C1Q8NGR4 320 aa6.28□□□□□ -1.4
NPLOC4-210ENST00000572824 OR1L4Q8NGR5 311 aa6.28□□□□□ -1.4
NPLOC4-210ENST00000572824 SCRT2Q9NQ03 307 aa6.28□□□□□ -1.4
NPLOC4-210ENST00000572824 TMEM14CQ9P0S9 112 aa6.28□□□□□ -1.4
NPLOC4-210ENST00000572824 MDFICQ9P1T7 246 aa6.28□□□□□ -1.4
NPLOC4-210ENST00000572824 LOC100131303A0A0U1RQF7 123 aa6.27□□□□□ -1.41
NPLOC4-210ENST00000572824 ZNF253O75346 499 aa6.27□□□□□ -1.41
NPLOC4-210ENST00000572824 HIST1H1EP10412 219 aaKnown RBP6.27□□□□□ -1.41
NPLOC4-210ENST00000572824 CRISP2P16562 243 aa6.27□□□□□ -1.41
NPLOC4-210ENST00000572824 STX12Q86Y82 276 aa6.27□□□□□ -1.41
NPLOC4-210ENST00000572824 WFDC10BQ8IUB3 73 aa6.27□□□□□ -1.41
NPLOC4-210ENST00000572824 PFDN5Q99471 154 aa6.27□□□□□ -1.41
NPLOC4-210ENST00000572824 TIMM9Q9Y5J7 89 aa6.27□□□□□ -1.41
NPLOC4-210ENST00000572824 FAM240BA0A1B0GVZ2 78 aa6.26□□□□□ -1.41
NPLOC4-210ENST00000572824 PRAF2O60831 178 aa6.26□□□□□ -1.41
NPLOC4-210ENST00000572824 GPX1P07203 203 aa6.26□□□□□ -1.41
NPLOC4-210ENST00000572824 S100A11P31949 105 aa6.26□□□□□ -1.41
NPLOC4-210ENST00000572824 H2BFSP57053 126 aa6.26□□□□□ -1.41
NPLOC4-210ENST00000572824 RAB31Q13636 194 aa6.26□□□□□ -1.41
NPLOC4-210ENST00000572824 GUK1Q16774 197 aa6.26□□□□□ -1.41
NPLOC4-210ENST00000572824 C9orf47Q6ZRZ4 202 aa6.26□□□□□ -1.41
NPLOC4-210ENST00000572824 MRPL53Q96EL3 112 aaKnown RBP6.26□□□□□ -1.41
NPLOC4-210ENST00000572824 ZNF479Q96JC4 524 aa6.26□□□□□ -1.41
NPLOC4-210ENST00000572824 LINC00477Q96M19 166 aa6.26□□□□□ -1.41
NPLOC4-210ENST00000572824 SMIM3Q9BZL3 60 aa6.26□□□□□ -1.41
NPLOC4-210ENST00000572824 ZNF492Q9P255 531 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms