RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 A0A1B0GUV1 79 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 PLAC8L1A1L4L8 177 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 H3BNG1 76 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 PRAF2O60831 178 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 AZU1P20160 251 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 LEPP41159 167 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 BCAP31P51572 246 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 OR5I1Q13606 314 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 SSX7Q7RTT5 188 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 RNASE8Q8TDE3 154 aaKnown RBP6.45□□□□□ -1.38
CIITA-208ENST00000572665 ODF3Q96PU9 254 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 PYGO2Q9BRQ0 406 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 DNAJC4Q9NNZ3 241 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 VPS13DQ5THJ4 4388 aa6.45□□□□□ -1.38
CIITA-208ENST00000572665 A0A1W2PPQ1 181 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 INMT-MINDY4F8WBC2 141 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 ZNF253O75346 499 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 CDK2AP2O75956 126 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 PRM2P04554 102 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 CAMLGP49069 296 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 HBG1P69891 147 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 HBG2P69892 147 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 FCN2Q15485 313 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 PATE2Q6UY27 113 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 ZNF680Q8NEM1 530 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 RXFP4Q8TDU9 374 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 Q9H8V8 135 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 GPN1Q9HCN4 374 aaPredicted RBP6.44□□□□□ -1.38
CIITA-208ENST00000572665 PRELID1Q9Y255 219 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 LINC00588Q9Y4M8 146 aa6.44□□□□□ -1.38
CIITA-208ENST00000572665 C7orf66A4D0T2 115 aa6.43□□□□□ -1.38
CIITA-208ENST00000572665 C5orf51A6NDU8 294 aa6.43□□□□□ -1.38
CIITA-208ENST00000572665 MRPS12O15235 138 aaKnown RBP6.43□□□□□ -1.38
CIITA-208ENST00000572665 CCNKO75909 580 aa6.43□□□□□ -1.38
CIITA-208ENST00000572665 CAV2P51636 162 aa6.43□□□□□ -1.38
CIITA-208ENST00000572665 GAGE5Q13069 117 aa6.43□□□□□ -1.38
CIITA-208ENST00000572665 GAGE6Q13070 117 aa6.43□□□□□ -1.38
CIITA-208ENST00000572665 STX12Q86Y82 276 aa6.43□□□□□ -1.38
CIITA-208ENST00000572665 MRPL53Q96EL3 112 aaKnown RBP6.43□□□□□ -1.38
CIITA-208ENST00000572665 MGST2Q99735 147 aa6.43□□□□□ -1.38
CIITA-208ENST00000572665 UQCC1Q9NVA1 299 aa6.43□□□□□ -1.38
CIITA-208ENST00000572665 RCL1Q9Y2P8 373 aaKnown RBP6.43□□□□□ -1.38
CIITA-208ENST00000572665 TRAV26-1A0A087WT03 109 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 FAM25EA8MYX2 175 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 CCSO14618 274 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 SLC25A5P05141 298 aaKnown RBP6.42□□□□□ -1.38
CIITA-208ENST00000572665 IGLC2P0DOY2 106 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 S100A11P31949 105 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 DAZ2Q13117 558 aaKnown RBP6.42□□□□□ -1.38
CIITA-208ENST00000572665 IL15RAQ13261 267 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 PDE6HQ13956 83 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 OPCMLQ14982 345 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 RGS21Q2M5E4 152 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 VWC2Q2TAL6 325 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 GFI1BQ5VTD9 330 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 LINC00612Q8N6U2 182 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 TMEM37Q8WXS4 190 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 LINC00477Q96M19 166 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 UPK3BQ9BT76 320 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 LSM5Q9Y4Y9 91 aaKnown RBP6.42□□□□□ -1.38
CIITA-208ENST00000572665 HERC2O95714 4834 aa6.42□□□□□ -1.38
CIITA-208ENST00000572665 TRGV2A0A075B6R0 118 aa6.41□□□□□ -1.38
CIITA-208ENST00000572665 TRAV12-3A0A0B4J271 114 aa6.41□□□□□ -1.38
CIITA-208ENST00000572665 MPDU1O75352 247 aa6.41□□□□□ -1.38
CIITA-208ENST00000572665 HIST1H1EP10412 219 aaKnown RBP6.41□□□□□ -1.38
CIITA-208ENST00000572665 RPL29P47914 159 aaKnown RBP6.41□□□□□ -1.38
CIITA-208ENST00000572665 BAXQ07812 192 aa6.41□□□□□ -1.38
CIITA-208ENST00000572665 ATP6V1FQ16864 119 aa6.41□□□□□ -1.38
CIITA-208ENST00000572665 C2orf50Q96LR7 162 aa6.41□□□□□ -1.38
CIITA-208ENST00000572665 Q9H3A6 140 aa6.41□□□□□ -1.38
CIITA-208ENST00000572665 WDR83OSQ9Y284 106 aa6.41□□□□□ -1.38
CIITA-208ENST00000572665 TIMM9Q9Y5J7 89 aa6.41□□□□□ -1.38
CIITA-208ENST00000572665 IGLV5-45A0A087WSX0 123 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 A0A0J9YY99 117 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 SLC17A3O00476 420 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 NMBP08949 121 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 SNRPCP09234 159 aaKnown RBP6.4□□□□□ -1.38
CIITA-208ENST00000572665 SULT1A1P50225 295 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 H2BFSP57053 126 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 ERVFC1-1P60608 527 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 ARL16Q0P5N6 197 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 SLAQ13239 276 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 EIF4E3Q8N5X7 224 aaKnown RBP6.4□□□□□ -1.38
CIITA-208ENST00000572665 MAPKAPK5-AS1Q8N8E1 139 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 C18orf15Q96N68 181 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 KCNIP2Q9NS61 270 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 LYRM2Q9NU23 88 aaPredicted RBP6.4□□□□□ -1.38
CIITA-208ENST00000572665 SLC39A9Q9NUM3 307 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 TMEM14CQ9P0S9 112 aa6.4□□□□□ -1.38
CIITA-208ENST00000572665 MRPS16Q9Y3D3 137 aaKnown RBP6.4□□□□□ -1.38
CIITA-208ENST00000572665 TRBV19A0A075B6N1 114 aa6.39□□□□□ -1.39
CIITA-208ENST00000572665 UBE2L5PA0A1B0GUS4 154 aa6.39□□□□□ -1.39
CIITA-208ENST00000572665 C7orf71A4D174 169 aa6.39□□□□□ -1.39
CIITA-208ENST00000572665 H3BQ15 152 aa6.39□□□□□ -1.39
CIITA-208ENST00000572665 H3BTX0 84 aa6.39□□□□□ -1.39
CIITA-208ENST00000572665 CST7O76096 145 aa6.39□□□□□ -1.39
CIITA-208ENST00000572665 GPX1P07203 203 aa6.39□□□□□ -1.39
CIITA-208ENST00000572665 CT45A10P0DMU9 189 aa6.39□□□□□ -1.39
CIITA-208ENST00000572665 S100A10P60903 97 aa6.39□□□□□ -1.39
CIITA-208ENST00000572665 TMEM78Q5T7P6 136 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms