RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 ZNF138P52744 262 aa10.6□□□□□ -0.71
NPLOC4-207ENST00000572346 ZNF680Q8NEM1 530 aa10.6□□□□□ -0.71
NPLOC4-207ENST00000572346 ODF3Q96PU9 254 aa10.6□□□□□ -0.71
NPLOC4-207ENST00000572346 ATG101Q9BSB4 218 aa10.6□□□□□ -0.71
NPLOC4-207ENST00000572346 TMEM208Q9BTX3 173 aa10.6□□□□□ -0.71
NPLOC4-207ENST00000572346 GOLT1BQ9Y3E0 138 aa10.6□□□□□ -0.71
NPLOC4-207ENST00000572346 TRAV12-2A0A075B6T6 113 aa10.59□□□□□ -0.71
NPLOC4-207ENST00000572346 IGHV3OR16-12A0A075B7B8 117 aa10.59□□□□□ -0.71
NPLOC4-207ENST00000572346 A0A1B0GVY2 172 aa10.59□□□□□ -0.71
NPLOC4-207ENST00000572346 PEX7O00628 323 aa10.59□□□□□ -0.71
NPLOC4-207ENST00000572346 CYB561D1Q8N8Q1 229 aa10.59□□□□□ -0.71
NPLOC4-207ENST00000572346 HIST1H2BAQ96A08 127 aa10.59□□□□□ -0.71
NPLOC4-207ENST00000572346 IGF2BP2-AS1Q96M15 143 aa10.59□□□□□ -0.71
NPLOC4-207ENST00000572346 ZNF492Q9P255 531 aa10.59□□□□□ -0.71
NPLOC4-207ENST00000572346 GPX1P07203 203 aa10.58□□□□□ -0.72
NPLOC4-207ENST00000572346 POM121L12Q8N7R1 296 aa10.58□□□□□ -0.72
NPLOC4-207ENST00000572346 Q8TAT8 98 aa10.58□□□□□ -0.72
NPLOC4-207ENST00000572346 SGK494Q96LW2 274 aa10.58□□□□□ -0.72
NPLOC4-207ENST00000572346 TCEAL7Q9BRU2 100 aa10.58□□□□□ -0.72
NPLOC4-207ENST00000572346 NDFIP1Q9BT67 221 aa10.58□□□□□ -0.72
NPLOC4-207ENST00000572346 TRAV8-1A0A0A6YYK1 113 aa10.57□□□□□ -0.72
NPLOC4-207ENST00000572346 FBLL1A6NHQ2 334 aaKnown RBP10.57□□□□□ -0.72
NPLOC4-207ENST00000572346 P0DMU3 169 aa10.57□□□□□ -0.72
NPLOC4-207ENST00000572346 FAM231AP0DMU4 169 aa10.57□□□□□ -0.72
NPLOC4-207ENST00000572346 FAM231CP0DMU5 169 aa10.57□□□□□ -0.72
NPLOC4-207ENST00000572346 AKR1C3P42330 323 aa10.57□□□□□ -0.72
NPLOC4-207ENST00000572346 PRNTQ86SH4 94 aa10.57□□□□□ -0.72
NPLOC4-207ENST00000572346 TXNDC17Q9BRA2 123 aa10.57□□□□□ -0.72
NPLOC4-207ENST00000572346 NDUFAF3Q9BU61 184 aa10.57□□□□□ -0.72
NPLOC4-207ENST00000572346 PSG8Q9UQ74 426 aa10.57□□□□□ -0.72
NPLOC4-207ENST00000572346 FAT2Q9NYQ8 4349 aa10.57□□□□□ -0.72
NPLOC4-207ENST00000572346 CRXO43186 299 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-207ENST00000572346 BCL2P10415 239 aa10.56□□□□□ -0.72
NPLOC4-207ENST00000572346 TAGLN2P37802 199 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-207ENST00000572346 UBE2G1P62253 170 aa10.56□□□□□ -0.72
NPLOC4-207ENST00000572346 FLI1Q01543 452 aaPredicted RBP10.56□□□□□ -0.72
NPLOC4-207ENST00000572346 CCDC28AQ8IWP9 274 aa10.56□□□□□ -0.72
NPLOC4-207ENST00000572346 TMEM75Q8N9X5 138 aa10.56□□□□□ -0.72
NPLOC4-207ENST00000572346 PCNPQ8WW12 178 aaKnown RBP10.56□□□□□ -0.72
NPLOC4-207ENST00000572346 LINC01587Q99440 93 aa10.56□□□□□ -0.72
NPLOC4-207ENST00000572346 VAX2Q9UIW0 290 aa10.56□□□□□ -0.72
NPLOC4-207ENST00000572346 LENEPQ9Y5L5 61 aa10.56□□□□□ -0.72
NPLOC4-207ENST00000572346 DNAH2Q9P225 4427 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 TRAV12-3A0A0B4J271 114 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 TRAV34A0A0B4J273 112 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 TRBV7-9A0A0J9YWB2 115 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 M0R2N4 97 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 RTL8CO15255 209 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 NMBP08949 121 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 CRISP2P16562 243 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 RNASE4P34096 147 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 RAB14P61106 215 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 KIR3DS1Q14943 382 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 GFI1BQ5VTD9 330 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 ZNF705AQ6ZN79 300 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 NEU1Q99519 415 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 C20orf144Q9BQM9 153 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 NIPSNAP3BQ9BS92 247 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 TREM1Q9NP99 234 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 DNAH17Q9UFH2 4485 aa10.55□□□□□ -0.72
NPLOC4-207ENST00000572346 C7orf71A4D174 169 aa10.54□□□□□ -0.72
NPLOC4-207ENST00000572346 PRSS29PA6NIE9 313 aa10.54□□□□□ -0.72
NPLOC4-207ENST00000572346 MEF2BQ02080 365 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-207ENST00000572346 BTN1A1Q13410 526 aa10.54□□□□□ -0.72
NPLOC4-207ENST00000572346 C1orf158Q8N1D5 194 aa10.54□□□□□ -0.72
NPLOC4-207ENST00000572346 TMEM256Q8N2U0 113 aa10.54□□□□□ -0.72
NPLOC4-207ENST00000572346 LYPD6BQ8NI32 183 aa10.54□□□□□ -0.72
NPLOC4-207ENST00000572346 FAM19A4Q96LR4 140 aa10.54□□□□□ -0.72
NPLOC4-207ENST00000572346 LINC00479Q96M42 142 aa10.54□□□□□ -0.72
NPLOC4-207ENST00000572346 PKHD1P08F94 4074 aa10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 LOC102723971A0A1B0GUV8 181 aa10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 SCO2A0A1W2PP80 73 aa10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 RBFOX3A6NFN3 312 aa10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 SMIM9A6NGZ8 99 aa10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 KLLNB2CW77 178 aa10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 S100A9P06702 114 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 SPART-AS1P0CW21 52 aa10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 MED14OSP0DP75 135 aa10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 HTN1P15515 57 aa10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 SAPCD1Q5SSQ6 148 aa10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 ZFAND2AQ8N6M9 145 aa10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 FMC1Q96HJ9 113 aa10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 EIF5A2Q9GZV4 153 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-207ENST00000572346 MUC4Q99102 2169 aa10.52□□□□□ -0.72
NPLOC4-207ENST00000572346 TMEM189A5PLL7 270 aa10.52□□□□□ -0.73
NPLOC4-207ENST00000572346 H7BYZ3 331 aa10.52□□□□□ -0.73
NPLOC4-207ENST00000572346 PDE6DO43924 150 aa10.52□□□□□ -0.73
NPLOC4-207ENST00000572346 IGLV2-11P01706 119 aa10.52□□□□□ -0.73
NPLOC4-207ENST00000572346 EMP1P54849 157 aa10.52□□□□□ -0.73
NPLOC4-207ENST00000572346 RRN3P1Q2M238 152 aa10.52□□□□□ -0.73
NPLOC4-207ENST00000572346 LGALS9BQ3B8N2 356 aa10.52□□□□□ -0.73
NPLOC4-207ENST00000572346 MED9Q9NWA0 146 aa10.52□□□□□ -0.73
NPLOC4-207ENST00000572346 TMEM183BQ1AE95 376 aa10.51□□□□□ -0.73
NPLOC4-207ENST00000572346 SMUG1Q53HV7 270 aa10.51□□□□□ -0.73
NPLOC4-207ENST00000572346 TOR2AQ5JU69 321 aa10.51□□□□□ -0.73
NPLOC4-207ENST00000572346 Q86TA4 180 aa10.51□□□□□ -0.73
NPLOC4-207ENST00000572346 TVP23CQ96ET8 276 aa10.51□□□□□ -0.73
NPLOC4-207ENST00000572346 C8orf49Q96NF6 230 aa10.51□□□□□ -0.73
NPLOC4-207ENST00000572346 ZNF705GA8MUZ8 300 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-207ENST00000572346 RGS13O14921 159 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms