RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 KLK5Q9Y337 293 aaPredicted RBP6.11□□□□□ -1.43
SMG6-210ENST00000572205 HERC2O95714 4834 aa6.11□□□□□ -1.43
SMG6-210ENST00000572205 C7orf71A4D174 169 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 LYRM9A8MSI8 78 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 H7BYZ3 331 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 ARPC5O15511 151 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 IGLV2-11P01706 119 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 SLC25A5P05141 298 aaKnown RBP6.1□□□□□ -1.43
SMG6-210ENST00000572205 NMBP08949 121 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 SPART-AS1P0CW21 52 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 CDC34P49427 236 aaPredicted RBP6.1□□□□□ -1.43
SMG6-210ENST00000572205 TCTAP57738 103 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 SERF2P84101 59 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 ACOT6Q3I5F7 207 aaPredicted RBP6.1□□□□□ -1.43
SMG6-210ENST00000572205 PQLC2Q6ZP29 291 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 KCNRGQ8N5I3 272 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 OR10G4Q8NGN3 311 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 OR10G9Q8NGN4 311 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 OR10G7Q8NGN6 311 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 SCGB1C1Q8TD33 95 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 C16orf74Q96GX8 76 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 NIPSNAP3BQ9BS92 247 aa6.1□□□□□ -1.43
SMG6-210ENST00000572205 KIAA1109Q2LD37 5005 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 TRAV8-1A0A0A6YYK1 113 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 TRAV12-3A0A0B4J271 114 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 TEX48A0A1B0GUV7 120 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 IGLL5B9A064 214 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 LY6G6CO95867 125 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 GCHFRP30047 84 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 LEPP41159 167 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 TAS2R45P59539 299 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 RANP62826 216 aaKnown RBP6.09□□□□□ -1.43
SMG6-210ENST00000572205 GNG5P63218 68 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 Q6AWC8 147 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 DGAT2L7PQ6IED9 249 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 Q6ZNX1 250 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 ARL6IP6Q8N6S5 226 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 TMED6Q8WW62 240 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 LINC00477Q96M19 166 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 OTORQ9NRC9 128 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 TP53TG3Q9ULZ0 132 aa6.09□□□□□ -1.43
SMG6-210ENST00000572205 HMSDA8MTL9 139 aa6.08□□□□□ -1.44
SMG6-210ENST00000572205 HOXA5P20719 270 aa6.08□□□□□ -1.44
SMG6-210ENST00000572205 ZNF138P52744 262 aa6.08□□□□□ -1.44
SMG6-210ENST00000572205 ANXA2RQ3ZCQ2 193 aa6.08□□□□□ -1.44
SMG6-210ENST00000572205 TMEM88Q6PEY1 159 aa6.08□□□□□ -1.44
SMG6-210ENST00000572205 ZNF493Q6ZR52 646 aa6.08□□□□□ -1.44
SMG6-210ENST00000572205 LINC01587Q99440 93 aa6.08□□□□□ -1.44
SMG6-210ENST00000572205 PYGO2Q9BRQ0 406 aa6.08□□□□□ -1.44
SMG6-210ENST00000572205 TMEM208Q9BTX3 173 aa6.08□□□□□ -1.44
SMG6-210ENST00000572205 AAMDCQ9H7C9 122 aa6.08□□□□□ -1.44
SMG6-210ENST00000572205 FHITP49789 147 aa6.07□□□□□ -1.44
SMG6-210ENST00000572205 TCL1AP56279 114 aa6.07□□□□□ -1.44
SMG6-210ENST00000572205 FAM3BP58499 235 aaPredicted RBP6.07□□□□□ -1.44
SMG6-210ENST00000572205 DAZ2Q13117 558 aaKnown RBP6.07□□□□□ -1.44
SMG6-210ENST00000572205 Q6ZTI0 123 aa6.07□□□□□ -1.44
SMG6-210ENST00000572205 INO80EQ8NBZ0 244 aaPredicted RBP6.07□□□□□ -1.44
SMG6-210ENST00000572205 GNPNAT1Q96EK6 184 aaPredicted RBP6.07□□□□□ -1.44
SMG6-210ENST00000572205 C18orf15Q96N68 181 aa6.07□□□□□ -1.44
SMG6-210ENST00000572205 TMPRSS5Q9H3S3 457 aa6.07□□□□□ -1.44
SMG6-210ENST00000572205 NOP10Q9NPE3 64 aaKnown RBP6.07□□□□□ -1.44
SMG6-210ENST00000572205 C11orf21Q9P2W6 132 aa6.07□□□□□ -1.44
SMG6-210ENST00000572205 LENEPQ9Y5L5 61 aa6.07□□□□□ -1.44
SMG6-210ENST00000572205 LRP1BQ9NZR2 4599 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 CTXND1A0A1B0GTU2 59 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 PGPA6NDG6 321 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 TAAR5O14804 337 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 BCL2L11O43521 198 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 SPINK4O60575 86 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 TCRAP04437 139 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 ZNF80P51504 273 aaPredicted RBP6.06□□□□□ -1.44
SMG6-210ENST00000572205 DAD1P61803 113 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 TDRG1Q3Y452 100 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 IBA57Q5T440 356 aaKnown RBP6.06□□□□□ -1.44
SMG6-210ENST00000572205 TMEM78Q5T7P6 136 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 GOLT1AQ6ZVE7 132 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 ZNF575Q86XF7 245 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 TCTE3Q8IZS6 198 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 FAM210BQ96KR6 192 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 GSN-AS1Q9NRJ2 163 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 KLF12Q9Y4X4 402 aa6.06□□□□□ -1.44
SMG6-210ENST00000572205 TIMM8BQ9Y5J9 83 aaPredicted RBP6.06□□□□□ -1.44
SMG6-210ENST00000572205 IGHV1OR15-1A0A075B7D0 117 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 A0A1W2PPV4 95 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 FAM74A7A6NL05 159 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 F6UZH7 168 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 SCGB1D1O95968 90 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 CXorf1O96002 111 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 MBP02144 154 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 DEFB130BP0DP73 79 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 DEFB130AP0DP74 79 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 GCSHP23434 173 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 RNASE4P34096 147 aaKnown RBP6.05□□□□□ -1.44
SMG6-210ENST00000572205 FGF8P55075 233 aaPredicted RBP6.05□□□□□ -1.44
SMG6-210ENST00000572205 EIF4E3Q8N5X7 224 aaKnown RBP6.05□□□□□ -1.44
SMG6-210ENST00000572205 C5orf17Q8NAS9 161 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 STOML3Q8TAV4 291 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 NDUFAF3Q9BU61 184 aa6.05□□□□□ -1.44
SMG6-210ENST00000572205 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
SMG6-210ENST00000572205 BORCS7-ASMTA0A0B4J1R7 106 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms