RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 TSSC4Q9Y5U2 329 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 SELENOKQ9Y6D0 94 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 MUC4Q99102 2169 aa4.62□□□□□ -1.67
TRAPPC1-204ENST00000571947 TRAV2A0A0B4J234 112 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 A0A1B0GUT8 65 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 A0A1B0GW15 77 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 APCSP02743 223 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 S100A8P05109 93 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 CSN3P07498 182 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 ZNF705DP0CH99 300 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 ZNF705BP0CI00 300 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 AKR1D1P51857 326 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 PROK1P58294 105 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 PAFAH1B2P68402 229 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 HBBP68871 147 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 FHL3Q13643 280 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 LINC01559Q495D7 138 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 WFDC3Q8IUB2 231 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 APRG1Q8IVJ8 170 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 HIST3H2BBQ8N257 126 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 OR9G4Q8NGQ1 327 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 DLX4Q92988 240 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 RAX2Q96IS3 184 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 DUX3Q96PT4 197 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 CITED2Q99967 270 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 RNF114Q9Y508 228 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 SETXQ7Z333 2677 aaKnown RBP4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 SVEP1Q4LDE5 3571 aa4.61□□□□□ -1.67
TRAPPC1-204ENST00000571947 NSD1Q96L73 2696 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 TMSB15BA0A087X1C1 80 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 INAFM1C9JVW0 142 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 F6UB75 175 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 CCL24O00175 119 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 TCF21O43680 179 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 ORM1P02763 201 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 ARMS2P0C7Q2 107 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 ZNF688P0C7X2 276 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 IGLC6P0CF74 106 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 CRISP2P16562 243 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 CTRLP40313 264 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 TFPI2P48307 235 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 CAMPP49913 170 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 DEFB1P60022 68 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 Q0VG73 95 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 PRR9Q5T870 116 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 GFI1BQ5VTD9 330 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 LYZL1Q6UWQ5 148 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 ZNF575Q86XF7 245 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 ZFAND2AQ8N6M9 145 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 BORCS7Q96B45 105 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 ODF3Q96PU9 254 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 NF1P21359 2839 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 AKAP9Q99996 3911 aa4.6□□□□□ -1.67
TRAPPC1-204ENST00000571947 TRAV25A0A0B4J276 109 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 TRAV21A0A0B4J279 112 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 IGKV3D-20A0A0C4DH25 116 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 A0A0J9YX75 114 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 A0A1W2PRX2 142 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 GRIFINA4D1Z8 144 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 IFITM10A6NMD0 228 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 ADARB2-AS1A8MUL3 147 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 J3QL48 77 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 CRLF1O75462 422 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 DUSP14O95147 198 aaKnown RBP4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 FN1P02751 2386 aaKnown RBP4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 SNRPD3P62318 126 aaKnown RBP4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 ANK3Q12955 4377 aaKnown RBP4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 SLAQ13239 276 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 DEFB114Q30KQ6 69 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 KIAA1644Q3SXP7 199 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 OR10J3Q5JRS4 329 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 PSMG4Q5JS54 123 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 HIST2H2BDQ6DRA6 164 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 EBLN2Q6P2I7 272 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 C11orf44Q8N8P7 122 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 FER1L6-AS1Q8NA97 138 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 DYNLRB2Q8TF09 96 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 C11orf21Q9P2W6 132 aa4.59□□□□□ -1.67
TRAPPC1-204ENST00000571947 NACAE9PAV3 2078 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 HIVEP1P15822 2718 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 LOC102724200A0A096LPH7 203 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 KLLNB2CW77 178 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 F2Z2F3 143 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 GPX1P07203 203 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 ESDP10768 282 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 S100A2P29034 98 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 SRIP30626 198 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 LEPP41159 167 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 PDZD11Q5EBL8 140 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 DNLZQ5SXM8 178 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 LCE2AQ5TA79 106 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 FOXI2Q6ZQN5 318 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 ZNF493Q6ZR52 646 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 TMEM61Q8N0U2 210 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 LINC00518Q8N0U6 118 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 TMEM256Q8N2U0 113 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 HIST1H2BLQ99880 126 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 ALKBH7Q9BT30 221 aaPredicted RBP4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 TPPP3Q9BW30 176 aa4.58□□□□□ -1.68
TRAPPC1-204ENST00000571947 SSBP4Q9BWG4 385 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms