RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 NEFHP12036 1026 aa0.42□□□□□ -2.34
NPLOC4-205ENST00000571562 RPS3P23396 243 aaKnown RBP eCLIP0.42□□□□□ -2.34
NPLOC4-205ENST00000571562 CAV3P56539 151 aa0.42□□□□□ -2.34
NPLOC4-205ENST00000571562 TMEM128Q5BJH2 165 aa0.42□□□□□ -2.34
NPLOC4-205ENST00000571562 AP1S3Q96PC3 154 aa0.42□□□□□ -2.34
NPLOC4-205ENST00000571562 MRPL36Q9P0J6 103 aaKnown RBP0.42□□□□□ -2.34
NPLOC4-205ENST00000571562 JPT1Q9UK76 154 aa0.42□□□□□ -2.34
NPLOC4-205ENST00000571562 ANKRD31Q8N7Z5 1873 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 HMCN1Q96RW7 5635 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 ADGBQ8N7X0 1667 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 TRBV7-6A0A0J9YX20 115 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 LOC107984640A0A0U1RRK4 108 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 LOC101927531A0A1B0GV80 90 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 LY6G6CO95867 125 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 GTF2A1P52655 376 aaPredicted RBP0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 DNAJB13P59910 316 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 XAF1Q6GPH4 301 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 OR51A4Q8NGJ6 313 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 OR9Q1Q8NGQ5 310 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 BRK1Q8WUW1 75 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 CCDC115Q96NT0 180 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 CENPHQ9H3R5 247 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 DLC1Q96QB1 1528 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 LOC285556D6RIA3 1793 aa0.41□□□□□ -2.34
NPLOC4-205ENST00000571562 PIK3C2AO00443 1686 aa0.4□□□□□ -2.34
NPLOC4-205ENST00000571562 FGD6Q6ZV73 1430 aa0.4□□□□□ -2.34
NPLOC4-205ENST00000571562 LOC107986453A0A1B0GWG9 222 aa0.4□□□□□ -2.35
NPLOC4-205ENST00000571562 CDC42EP2O14613 210 aa0.4□□□□□ -2.35
NPLOC4-205ENST00000571562 FAM107AO95990 144 aa0.4□□□□□ -2.35
NPLOC4-205ENST00000571562 ZNF56Q15929 161 aa0.4□□□□□ -2.35
NPLOC4-205ENST00000571562 GLYATL3Q5SZD4 288 aa0.4□□□□□ -2.35
NPLOC4-205ENST00000571562 ANK1P16157 1881 aa0.39□□□□□ -2.35
NPLOC4-205ENST00000571562 FAM135BQ49AJ0 1406 aa0.39□□□□□ -2.35
NPLOC4-205ENST00000571562 TMEM189A5PLL7 270 aa0.39□□□□□ -2.35
NPLOC4-205ENST00000571562 IGKCP01834 107 aa0.39□□□□□ -2.35
NPLOC4-205ENST00000571562 HBDP02042 147 aa0.39□□□□□ -2.35
NPLOC4-205ENST00000571562 RPL22P35268 128 aaKnown RBP0.39□□□□□ -2.35
NPLOC4-205ENST00000571562 FXYD6P3P58550 94 aa0.39□□□□□ -2.35
NPLOC4-205ENST00000571562 PLAC8Q9NZF1 115 aa0.39□□□□□ -2.35
NPLOC4-205ENST00000571562 CTTNBP2Q8WZ74 1663 aa0.39□□□□□ -2.35
NPLOC4-205ENST00000571562 EDF1O60869 148 aaKnown RBP0.38□□□□□ -2.35
NPLOC4-205ENST00000571562 TFAMQ00059 246 aaKnown RBP0.38□□□□□ -2.35
NPLOC4-205ENST00000571562 FXYD3Q14802 87 aa0.38□□□□□ -2.35
NPLOC4-205ENST00000571562 SAMD13Q5VXD3 122 aa0.38□□□□□ -2.35
NPLOC4-205ENST00000571562 LYPD5Q6UWN5 251 aa0.38□□□□□ -2.35
NPLOC4-205ENST00000571562 TMEM35BQ8NCS4 154 aa0.38□□□□□ -2.35
NPLOC4-205ENST00000571562 NAT14Q8WUY8 206 aa0.38□□□□□ -2.35
NPLOC4-205ENST00000571562 NAV2Q8IVL1 2488 aa0.38□□□□□ -2.35
NPLOC4-205ENST00000571562 FER1L6Q2WGJ9 1857 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 TCOF1Q13428 1488 aaKnown RBP0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 ATG2AQ2TAZ0 1938 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 NBDYA0A0U1RRE5 68 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 TMEM30CPA0ZSE6 113 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 SLC25A5P05141 298 aaKnown RBP0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 IL7P13232 177 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 EVI2AP22794 236 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 S100GP29377 79 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 SRP9P49458 86 aaKnown RBP0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 IQCJQ1A5X6 159 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 CCSMST1Q4G0I0 132 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 C10orf99Q6UWK7 81 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 SMIM7Q9BQ49 75 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 SELENOSQ9BQE4 189 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 C19orf12Q9NSK7 152 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 ABCA1O95477 2261 aa0.37□□□□□ -2.35
NPLOC4-205ENST00000571562 IFITM5A6NNB3 132 aa0.36□□□□□ -2.35
NPLOC4-205ENST00000571562 CKS2P33552 79 aa0.36□□□□□ -2.35
NPLOC4-205ENST00000571562 RHOHQ15669 191 aa0.36□□□□□ -2.35
NPLOC4-205ENST00000571562 TOMM20LQ6UXN7 152 aa0.36□□□□□ -2.35
NPLOC4-205ENST00000571562 C5orf56Q8N8D9 126 aa0.36□□□□□ -2.35
NPLOC4-205ENST00000571562 OR8J3Q8NGG0 315 aa0.36□□□□□ -2.35
NPLOC4-205ENST00000571562 SPAG17Q6Q759 2223 aa0.36□□□□□ -2.35
NPLOC4-205ENST00000571562 A2MP01023 1474 aa0.35□□□□□ -2.35
NPLOC4-205ENST00000571562 HIGD1CA8MV81 97 aa0.35□□□□□ -2.35
NPLOC4-205ENST00000571562 ETV6P41212 452 aa0.35□□□□□ -2.35
NPLOC4-205ENST00000571562 ASB16-AS1Q495Z4 193 aa0.35□□□□□ -2.35
NPLOC4-205ENST00000571562 OR5A2Q8NGI9 324 aa0.35□□□□□ -2.35
NPLOC4-205ENST00000571562 OTOSQ8NHW6 89 aa0.35□□□□□ -2.35
NPLOC4-205ENST00000571562 DDA1Q9BW61 102 aa0.35□□□□□ -2.35
NPLOC4-205ENST00000571562 MRPL35Q9NZE8 188 aaKnown RBP0.35□□□□□ -2.35
NPLOC4-205ENST00000571562 ABCA4P78363 2273 aa0.35□□□□□ -2.35
NPLOC4-205ENST00000571562 MYH1P12882 1939 aa0.34□□□□□ -2.35
NPLOC4-205ENST00000571562 IGHV1-24A0A0C4DH33 117 aa0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 BDP1A6H8Y1 2624 aa0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 PRORSD1PA6NEY8 169 aa0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 UQCRQO14949 82 aa0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 IGF2P01344 180 aa0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 TCRAP04437 139 aa0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 IDO2Q6ZQW0 420 aa0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 SMIM15Q7Z3B0 74 aa0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 DEFB132Q7Z7B7 95 aa0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 NDUFAF1Q9Y375 327 aa0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 ESPL1Q14674 2120 aa0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 KIAA1549LQ6ZVL6 1849 aa0.34□□□□□ -2.36
NPLOC4-205ENST00000571562 PBRM1Q86U86 1689 aa0.33□□□□□ -2.36
NPLOC4-205ENST00000571562 A0A0G2JMM0 328 aa0.33□□□□□ -2.36
NPLOC4-205ENST00000571562 TPST1O60507 370 aa0.33□□□□□ -2.36
NPLOC4-205ENST00000571562 LSM3P62310 102 aaKnown RBP0.33□□□□□ -2.36
NPLOC4-205ENST00000571562 SPINK13Q1W4C9 94 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms