RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 AMTNQ6UX39 209 aa8.81□□□□□ -1
CDRT1-206ENST00000571263 ZFAND2AQ8N6M9 145 aa8.81□□□□□ -1
CDRT1-206ENST00000571263 OR10G8Q8NGN5 311 aa8.81□□□□□ -1
CDRT1-206ENST00000571263 ZC2HC1AQ96GY0 325 aa8.81□□□□□ -1
CDRT1-206ENST00000571263 C8orf49Q96NF6 230 aa8.81□□□□□ -1
CDRT1-206ENST00000571263 C7orf77A4D0Y5 90 aa8.8□□□□□ -1
CDRT1-206ENST00000571263 C19orf71A6NCJ1 209 aa8.8□□□□□ -1
CDRT1-206ENST00000571263 CXorf65A6NEN9 183 aa8.8□□□□□ -1
CDRT1-206ENST00000571263 K7EN84 100 aa8.8□□□□□ -1
CDRT1-206ENST00000571263 GATCO43716 136 aaKnown RBP8.8□□□□□ -1
CDRT1-206ENST00000571263 DEFB1P60022 68 aa8.8□□□□□ -1
CDRT1-206ENST00000571263 RPS20P60866 119 aaKnown RBP8.8□□□□□ -1
CDRT1-206ENST00000571263 CT83Q5H943 113 aa8.8□□□□□ -1
CDRT1-206ENST00000571263 Q6AWC8 147 aa8.8□□□□□ -1
CDRT1-206ENST00000571263 PRR27Q6MZM9 219 aa8.8□□□□□ -1
CDRT1-206ENST00000571263 Q8N1Y9 231 aa8.8□□□□□ -1
CDRT1-206ENST00000571263 NHLRC2Q8NBF2 726 aa8.8□□□□□ -1
CDRT1-206ENST00000571263 NUDT10Q8NFP7 164 aa8.8□□□□□ -1
CDRT1-206ENST00000571263 NUDT11Q96G61 164 aa8.8□□□□□ -1
CDRT1-206ENST00000571263 LOC102724200A0A096LPH7 203 aaPredicted RBP8.79□□□□□ -1
CDRT1-206ENST00000571263 KIR2DL5BA0A0G2JN68 375 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 KIR2DL5BA0A0G2JPC4 375 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 C7orf71A4D174 169 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 A8MZ25 164 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 H7BYZ3 331 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 IGKV3-20P01619 116 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 RNASE4P34096 147 aaKnown RBP8.79□□□□□ -1
CDRT1-206ENST00000571263 APOC4P55056 127 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 OR5I1Q13606 314 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 KIR2DL5AQ8N109 375 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 DEFB125Q8N687 156 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 KIR2DL5BQ8NHK3 375 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 KCNS1Q96KK3 526 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 IMMP2LQ96T52 175 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 TUBA4BQ9H853 241 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 RPS10P5Q9NQ39 176 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 AURKAIP1Q9NWT8 199 aaPredicted RBP8.79□□□□□ -1
CDRT1-206ENST00000571263 WNK1Q9H4A3 2382 aa8.79□□□□□ -1
CDRT1-206ENST00000571263 FAM231BA6NCW3 169 aa8.78□□□□□ -1
CDRT1-206ENST00000571263 ZNF705GA8MUZ8 300 aaPredicted RBP8.78□□□□□ -1
CDRT1-206ENST00000571263 A8MWL6 223 aa8.78□□□□□ -1
CDRT1-206ENST00000571263 INSP01308 110 aa8.78□□□□□ -1
CDRT1-206ENST00000571263 CRIP1P50238 77 aa8.78□□□□□ -1
CDRT1-206ENST00000571263 RPL19P84098 196 aaKnown RBP8.78□□□□□ -1
CDRT1-206ENST00000571263 ZNF124Q15973 351 aa8.78□□□□□ -1
CDRT1-206ENST00000571263 SPINK13Q1W4C9 94 aa8.78□□□□□ -1
CDRT1-206ENST00000571263 RNF212Q495C1 297 aa8.78□□□□□ -1
CDRT1-206ENST00000571263 TMEM256Q8N2U0 113 aa8.78□□□□□ -1
CDRT1-206ENST00000571263 BTF3L4Q96K17 158 aa8.78□□□□□ -1
CDRT1-206ENST00000571263 CSTL1Q9H114 145 aa8.78□□□□□ -1
CDRT1-206ENST00000571263 RPP21Q9H633 154 aaKnown RBP8.78□□□□□ -1
CDRT1-206ENST00000571263 SRD5A3Q9H8P0 318 aa8.78□□□□□ -1
CDRT1-206ENST00000571263 TMEM189A5PLL7 270 aa8.77□□□□□ -1.01
CDRT1-206ENST00000571263 G3V4G9 280 aa8.77□□□□□ -1.01
CDRT1-206ENST00000571263 UBE2CO00762 179 aa8.77□□□□□ -1.01
CDRT1-206ENST00000571263 SH2D1AO60880 128 aa8.77□□□□□ -1.01
CDRT1-206ENST00000571263 CXCL1P09341 107 aa8.77□□□□□ -1.01
CDRT1-206ENST00000571263 PRB4P10163 310 aaPredicted RBP8.77□□□□□ -1.01
CDRT1-206ENST00000571263 S100PP25815 95 aa8.77□□□□□ -1.01
CDRT1-206ENST00000571263 LINC01559Q495D7 138 aa8.77□□□□□ -1.01
CDRT1-206ENST00000571263 KPRPQ5T749 579 aaPredicted RBP8.77□□□□□ -1.01
CDRT1-206ENST00000571263 FAM159AQ6UWV7 190 aa8.77□□□□□ -1.01
CDRT1-206ENST00000571263 GFRA4Q9GZZ7 299 aa8.77□□□□□ -1.01
CDRT1-206ENST00000571263 RNASE7Q9H1E1 156 aaKnown RBP8.77□□□□□ -1.01
CDRT1-206ENST00000571263 M0R2Z0 102 aa8.76□□□□□ -1.01
CDRT1-206ENST00000571263 ZNF324O75467 553 aaPredicted RBP8.76□□□□□ -1.01
CDRT1-206ENST00000571263 ORM1P02763 201 aa8.76□□□□□ -1.01
CDRT1-206ENST00000571263 ZNF80P51504 273 aaPredicted RBP8.76□□□□□ -1.01
CDRT1-206ENST00000571263 KRTAP10-11P60412 298 aa8.76□□□□□ -1.01
CDRT1-206ENST00000571263 GFI1BQ5VTD9 330 aa8.76□□□□□ -1.01
CDRT1-206ENST00000571263 KCNIP4Q6PIL6 250 aa8.76□□□□□ -1.01
CDRT1-206ENST00000571263 OR2D3Q8NGH3 330 aa8.76□□□□□ -1.01
CDRT1-206ENST00000571263 PYGO2Q9BRQ0 406 aa8.76□□□□□ -1.01
CDRT1-206ENST00000571263 LINC00467Q9BRT7 94 aa8.76□□□□□ -1.01
CDRT1-206ENST00000571263 SMCO4Q9NRQ5 59 aa8.76□□□□□ -1.01
CDRT1-206ENST00000571263 V9GYV3 84 aa8.76□□□□□ -1.01
CDRT1-206ENST00000571263 TRAV9-1A0A075B6T8 112 aa8.75□□□□□ -1.01
CDRT1-206ENST00000571263 TRAV12-3A0A0B4J271 114 aa8.75□□□□□ -1.01
CDRT1-206ENST00000571263 A0A1W2PPQ1 181 aa8.75□□□□□ -1.01
CDRT1-206ENST00000571263 RBMY1BA6NDE4 496 aaKnown RBP8.75□□□□□ -1.01
CDRT1-206ENST00000571263 RBMY1EA6NEQ0 496 aaKnown RBP8.75□□□□□ -1.01
CDRT1-206ENST00000571263 J3KRW8 73 aa8.75□□□□□ -1.01
CDRT1-206ENST00000571263 CRXO43186 299 aaPredicted RBP8.75□□□□□ -1.01
CDRT1-206ENST00000571263 RBMY1DP0C7P1 496 aaKnown RBP8.75□□□□□ -1.01
CDRT1-206ENST00000571263 FOXA3P55318 350 aaPredicted RBP8.75□□□□□ -1.01
CDRT1-206ENST00000571263 BTN1A1Q13410 526 aa8.75□□□□□ -1.01
CDRT1-206ENST00000571263 TDRG1Q3Y452 100 aa8.75□□□□□ -1.01
CDRT1-206ENST00000571263 LINC00322Q6ZN03 302 aaPredicted RBP8.75□□□□□ -1.01
CDRT1-206ENST00000571263 TSKUQ8WUA8 353 aa8.75□□□□□ -1.01
CDRT1-206ENST00000571263 IL36BQ9NZH7 164 aa8.75□□□□□ -1.01
CDRT1-206ENST00000571263 GOLT1BQ9Y3E0 138 aa8.75□□□□□ -1.01
CDRT1-206ENST00000571263 TRAV12-2A0A075B6T6 113 aa8.74□□□□□ -1.01
CDRT1-206ENST00000571263 IGHV1OR15-1A0A075B7D0 117 aa8.74□□□□□ -1.01
CDRT1-206ENST00000571263 IGHV4-30-4P0DP06 118 aa8.74□□□□□ -1.01
CDRT1-206ENST00000571263 RPL35AP18077 110 aaKnown RBP8.74□□□□□ -1.01
CDRT1-206ENST00000571263 DNLZQ5SXM8 178 aa8.74□□□□□ -1.01
CDRT1-206ENST00000571263 TMEM208Q9BTX3 173 aa8.74□□□□□ -1.01
CDRT1-206ENST00000571263 WFDC10AQ9H1F0 79 aa8.74□□□□□ -1.01
CDRT1-206ENST00000571263 NAT8BQ9UHF3 227 aa8.74□□□□□ -1.01
CDRT1-206ENST00000571263 TENM1Q9UKZ4 2725 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms