RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 HYDINQ4G0P3 5121 aa11.71□□□□□ -0.54
USB1-215ENST00000569252 IGHV3OR16-12A0A075B7B8 117 aa11.7□□□□□ -0.54
USB1-215ENST00000569252 TMEM256Q8N2U0 113 aa11.7□□□□□ -0.54
USB1-215ENST00000569252 RNF183Q96D59 192 aa11.7□□□□□ -0.54
USB1-215ENST00000569252 LINC01587Q99440 93 aa11.7□□□□□ -0.54
USB1-215ENST00000569252 C20orf144Q9BQM9 153 aa11.7□□□□□ -0.54
USB1-215ENST00000569252 SMDT1Q9H4I9 107 aa11.7□□□□□ -0.54
USB1-215ENST00000569252 CRISP2P16562 243 aa11.69□□□□□ -0.54
USB1-215ENST00000569252 CEBPGP53567 150 aa11.69□□□□□ -0.54
USB1-215ENST00000569252 TAS2R60P59551 318 aa11.69□□□□□ -0.54
USB1-215ENST00000569252 SMUG1Q53HV7 270 aa11.69□□□□□ -0.54
USB1-215ENST00000569252 CASC10Q5T4H9 136 aa11.69□□□□□ -0.54
USB1-215ENST00000569252 OR11H2Q8NH07 326 aa11.69□□□□□ -0.54
USB1-215ENST00000569252 TM2D3Q9BRN9 247 aa11.69□□□□□ -0.54
USB1-215ENST00000569252 KLF12Q9Y4X4 402 aa11.69□□□□□ -0.54
USB1-215ENST00000569252 AGRNO00468 2067 aa11.68□□□□□ -0.54
USB1-215ENST00000569252 TRAV12-3A0A0B4J271 114 aa11.68□□□□□ -0.54
USB1-215ENST00000569252 C7orf71A4D174 169 aa11.68□□□□□ -0.54
USB1-215ENST00000569252 TMEM250H0YL14 139 aa11.68□□□□□ -0.54
USB1-215ENST00000569252 GIG44P09565 113 aaPredicted RBP11.68□□□□□ -0.54
USB1-215ENST00000569252 RPL35P42766 123 aaKnown RBP11.68□□□□□ -0.54
USB1-215ENST00000569252 ZFAND6Q6FIF0 208 aa11.68□□□□□ -0.54
USB1-215ENST00000569252 BAGE2Q86Y30 109 aa11.68□□□□□ -0.54
USB1-215ENST00000569252 C11orf52Q96A22 123 aa11.68□□□□□ -0.54
USB1-215ENST00000569252 FAM19A4Q96LR4 140 aa11.68□□□□□ -0.54
USB1-215ENST00000569252 TRBV6-1A0A0K0K1D8 114 aa11.67□□□□□ -0.54
USB1-215ENST00000569252 KLLNB2CW77 178 aa11.67□□□□□ -0.54
USB1-215ENST00000569252 C3orf84H3BNL1 204 aa11.67□□□□□ -0.54
USB1-215ENST00000569252 H7BYZ3 331 aa11.67□□□□□ -0.54
USB1-215ENST00000569252 NDUFS6O75380 124 aaKnown RBP11.67□□□□□ -0.54
USB1-215ENST00000569252 IGLV2-11P01706 119 aa11.67□□□□□ -0.54
USB1-215ENST00000569252 HTN1P15515 57 aa11.67□□□□□ -0.54
USB1-215ENST00000569252 GFI1BQ5VTD9 330 aa11.67□□□□□ -0.54
USB1-215ENST00000569252 MUC7Q8TAX7 377 aa11.67□□□□□ -0.54
USB1-215ENST00000569252 C2CD4CQ8TF44 421 aa11.67□□□□□ -0.54
USB1-215ENST00000569252 TRAV21A0A0B4J279 112 aa11.66□□□□□ -0.54
USB1-215ENST00000569252 SMIM9A6NGZ8 99 aa11.66□□□□□ -0.54
USB1-215ENST00000569252 RGS13O14921 159 aa11.66□□□□□ -0.54
USB1-215ENST00000569252 CRXO43186 299 aaPredicted RBP11.66□□□□□ -0.54
USB1-215ENST00000569252 GNG4P50150 75 aa11.66□□□□□ -0.54
USB1-215ENST00000569252 BTN1A1Q13410 526 aa11.66□□□□□ -0.54
USB1-215ENST00000569252 ZNF674Q2M3X9 581 aa11.66□□□□□ -0.54
USB1-215ENST00000569252 Q86TA4 180 aa11.66□□□□□ -0.54
USB1-215ENST00000569252 CSNK1G2-AS1Q8NCQ2 148 aa11.66□□□□□ -0.54
USB1-215ENST00000569252 OVOL2Q9BRP0 275 aa11.66□□□□□ -0.54
USB1-215ENST00000569252 GCGP01275 180 aa11.65□□□□□ -0.54
USB1-215ENST00000569252 LTAP01374 205 aa11.65□□□□□ -0.54
USB1-215ENST00000569252 ZFAND2AQ8N6M9 145 aa11.65□□□□□ -0.54
USB1-215ENST00000569252 RETNQ9HD89 108 aa11.65□□□□□ -0.54
USB1-215ENST00000569252 RAB19A4D1S5 217 aa11.64□□□□□ -0.55
USB1-215ENST00000569252 MIFP14174 115 aa11.64□□□□□ -0.55
USB1-215ENST00000569252 KIR3DS1Q14943 382 aa11.64□□□□□ -0.55
USB1-215ENST00000569252 RRN3P1Q2M238 152 aa11.64□□□□□ -0.55
USB1-215ENST00000569252 FAM159AQ6UWV7 190 aa11.64□□□□□ -0.55
USB1-215ENST00000569252 TMEM183AQ8IXX5 376 aa11.64□□□□□ -0.55
USB1-215ENST00000569252 C1orf158Q8N1D5 194 aa11.64□□□□□ -0.55
USB1-215ENST00000569252 TVP23CQ96ET8 276 aa11.64□□□□□ -0.55
USB1-215ENST00000569252 C8orf49Q96NF6 230 aa11.64□□□□□ -0.55
USB1-215ENST00000569252 PYGO2Q9BRQ0 406 aa11.64□□□□□ -0.55
USB1-215ENST00000569252 BIN3Q9NQY0 253 aa11.64□□□□□ -0.55
USB1-215ENST00000569252 FABP5P3A8MUU1 101 aa11.63□□□□□ -0.55
USB1-215ENST00000569252 SRP19P09132 144 aaKnown RBP11.63□□□□□ -0.55
USB1-215ENST00000569252 MGST1P10620 155 aaKnown RBP11.63□□□□□ -0.55
USB1-215ENST00000569252 CENPWQ5EE01 88 aa11.63□□□□□ -0.55
USB1-215ENST00000569252 ZNF705AQ6ZN79 300 aaPredicted RBP11.63□□□□□ -0.55
USB1-215ENST00000569252 DAZAP1Q96EP5 407 aaKnown RBP11.63□□□□□ -0.55
USB1-215ENST00000569252 NEU1Q99519 415 aa11.63□□□□□ -0.55
USB1-215ENST00000569252 CBY3A6NI87 242 aa11.62□□□□□ -0.55
USB1-215ENST00000569252 ZNF324O75467 553 aaPredicted RBP11.62□□□□□ -0.55
USB1-215ENST00000569252 PFN1P07737 140 aaKnown RBP11.62□□□□□ -0.55
USB1-215ENST00000569252 FAM74A3Q4VXF1 159 aa11.62□□□□□ -0.55
USB1-215ENST00000569252 FAM162BQ5T6X4 162 aa11.62□□□□□ -0.55
USB1-215ENST00000569252 Q6AWC8 147 aa11.62□□□□□ -0.55
USB1-215ENST00000569252 SMIM12Q96EX1 92 aa11.62□□□□□ -0.55
USB1-215ENST00000569252 DERL1Q9BUN8 251 aa11.62□□□□□ -0.55
USB1-215ENST00000569252 PARLQ9H300 379 aa11.62□□□□□ -0.55
USB1-215ENST00000569252 NAGKQ9UJ70 344 aa11.62□□□□□ -0.55
USB1-215ENST00000569252 IGHV1OR15-1A0A075B7D0 117 aa11.61□□□□□ -0.55
USB1-215ENST00000569252 LCE6AA0A183 80 aa11.61□□□□□ -0.55
USB1-215ENST00000569252 TMEM189A5PLL7 270 aa11.61□□□□□ -0.55
USB1-215ENST00000569252 ZNF727A8MUV8 499 aa11.61□□□□□ -0.55
USB1-215ENST00000569252 PRR9Q5T870 116 aa11.61□□□□□ -0.55
USB1-215ENST00000569252 EIF4E3Q8N5X7 224 aaKnown RBP11.61□□□□□ -0.55
USB1-215ENST00000569252 NHLRC2Q8NBF2 726 aa11.61□□□□□ -0.55
USB1-215ENST00000569252 KCNS1Q96KK3 526 aa11.61□□□□□ -0.55
USB1-215ENST00000569252 SMIM7Q9BQ49 75 aa11.61□□□□□ -0.55
USB1-215ENST00000569252 PLECQ15149 4684 aaKnown RBP11.6□□□□□ -0.55
USB1-215ENST00000569252 ZNF705GA8MUZ8 300 aaPredicted RBP11.6□□□□□ -0.55
USB1-215ENST00000569252 SOHLH1Q5JUK2 328 aa11.6□□□□□ -0.55
USB1-215ENST00000569252 PRR27Q6MZM9 219 aa11.6□□□□□ -0.55
USB1-215ENST00000569252 ZNF493Q6ZR52 646 aa11.6□□□□□ -0.55
USB1-215ENST00000569252 C9JCJ5 164 aa11.59□□□□□ -0.55
USB1-215ENST00000569252 ORM1P02763 201 aa11.59□□□□□ -0.55
USB1-215ENST00000569252 SRSF3P84103 164 aaKnown RBP11.59□□□□□ -0.55
USB1-215ENST00000569252 MUC21Q5SSG8 566 aa11.59□□□□□ -0.55
USB1-215ENST00000569252 UQCC3Q6UW78 93 aa11.59□□□□□ -0.55
USB1-215ENST00000569252 COX8CQ7Z4L0 72 aa11.59□□□□□ -0.55
USB1-215ENST00000569252 C16orf74Q96GX8 76 aa11.59□□□□□ -0.55
USB1-215ENST00000569252 ZC2HC1AQ96GY0 325 aa11.59□□□□□ -0.55
USB1-215ENST00000569252 KRTAP17-1Q9BYP8 105 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms