RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 PSG8Q9UQ74 426 aa7.67□□□□□ -1.18
CDH3-210ENST00000569117 LOC102724200A0A096LPH7 203 aaPredicted RBP7.66□□□□□ -1.18
CDH3-210ENST00000569117 TRAV34A0A0B4J273 112 aa7.66□□□□□ -1.18
CDH3-210ENST00000569117 LTAP01374 205 aa7.66□□□□□ -1.18
CDH3-210ENST00000569117 PRB2P02812 416 aaPredicted RBP7.66□□□□□ -1.18
CDH3-210ENST00000569117 CRISP2P16562 243 aa7.66□□□□□ -1.18
CDH3-210ENST00000569117 LEPP41159 167 aa7.66□□□□□ -1.18
CDH3-210ENST00000569117 NUTF2P61970 127 aaKnown RBP7.66□□□□□ -1.18
CDH3-210ENST00000569117 RNF151Q2KHN1 245 aa7.66□□□□□ -1.18
CDH3-210ENST00000569117 MORN3Q6PF18 240 aaPredicted RBP7.66□□□□□ -1.18
CDH3-210ENST00000569117 LINC00322Q6ZN03 302 aaPredicted RBP7.66□□□□□ -1.18
CDH3-210ENST00000569117 IGF2BP2-AS1Q96M15 143 aa7.66□□□□□ -1.18
CDH3-210ENST00000569117 NDFIP1Q9BT67 221 aa7.66□□□□□ -1.18
CDH3-210ENST00000569117 TUBA4BQ9H853 241 aa7.66□□□□□ -1.18
CDH3-210ENST00000569117 TRBV20OR9-2A0A075B6H5 130 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 KIR2DL5BA0A0G2JN68 375 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 KIR2DL5BA0A0G2JPC4 375 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 KLLNB2CW77 178 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 C9JCJ5 164 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 AMBPP02760 352 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 RPL35AP18077 110 aaKnown RBP7.65□□□□□ -1.18
CDH3-210ENST00000569117 TSPOP30536 169 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 APOC4P55056 127 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 TAS2R60P59551 318 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 CENPWQ5EE01 88 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 PRNTQ86SH4 94 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 KIR2DL5AQ8N109 375 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 ZFAND2AQ8N6M9 145 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 KIR2DL5BQ8NHK3 375 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 TVP23CQ96ET8 276 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 SMIM12Q96EX1 92 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 SGK494Q96LW2 274 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 SLC35B3Q9H1N7 401 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 TREM1Q9NP99 234 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 ZFP30Q9Y2G7 519 aa7.65□□□□□ -1.18
CDH3-210ENST00000569117 M0R2Z0 102 aa7.64□□□□□ -1.19
CDH3-210ENST00000569117 FRMD6-AS1P0C7T7 363 aa7.64□□□□□ -1.19
CDH3-210ENST00000569117 CDKN1BP46527 198 aa7.64□□□□□ -1.19
CDH3-210ENST00000569117 GNG4P50150 75 aa7.64□□□□□ -1.19
CDH3-210ENST00000569117 SPINK13Q1W4C9 94 aa7.64□□□□□ -1.19
CDH3-210ENST00000569117 SAPCD1Q5SSQ6 148 aa7.64□□□□□ -1.19
CDH3-210ENST00000569117 COX8CQ7Z4L0 72 aa7.64□□□□□ -1.19
CDH3-210ENST00000569117 SMIM7Q9BQ49 75 aa7.64□□□□□ -1.19
CDH3-210ENST00000569117 CRXO43186 299 aaPredicted RBP7.63□□□□□ -1.19
CDH3-210ENST00000569117 CA1P00915 261 aaPredicted RBP7.63□□□□□ -1.19
CDH3-210ENST00000569117 GIG44P09565 113 aaPredicted RBP7.63□□□□□ -1.19
CDH3-210ENST00000569117 SFTA3P0C7M3 94 aa7.63□□□□□ -1.19
CDH3-210ENST00000569117 CEBPGP53567 150 aa7.63□□□□□ -1.19
CDH3-210ENST00000569117 FAM74A3Q4VXF1 159 aa7.63□□□□□ -1.19
CDH3-210ENST00000569117 PRR9Q5T870 116 aa7.63□□□□□ -1.19
CDH3-210ENST00000569117 GFI1BQ5VTD9 330 aa7.63□□□□□ -1.19
CDH3-210ENST00000569117 TMEM183AQ8IXX5 376 aa7.63□□□□□ -1.19
CDH3-210ENST00000569117 ASCL2Q99929 193 aa7.63□□□□□ -1.19
CDH3-210ENST00000569117 MLST8Q9BVC4 326 aa7.63□□□□□ -1.19
CDH3-210ENST00000569117 C1QTNF4Q9BXJ3 329 aa7.63□□□□□ -1.19
CDH3-210ENST00000569117 CSTL1Q9H114 145 aa7.63□□□□□ -1.19
CDH3-210ENST00000569117 MEGF8Q7Z7M0 2845 aa7.63□□□□□ -1.19
CDH3-210ENST00000569117 C7orf71A4D174 169 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 ZNF727A8MUV8 499 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 UBE2CO00762 179 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 INSP01308 110 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 IGLV2-8P01709 118 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 FXYD7P58549 80 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 NDUFA5Q16718 116 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 ZNF674Q2M3X9 581 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 SMUG1Q53HV7 270 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 SOHLH1Q5JUK2 328 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 BAGE2Q86Y30 109 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 ZC2HC1AQ96GY0 325 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 C8orf49Q96NF6 230 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 C20orf144Q9BQM9 153 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 XCL2Q9UBD3 114 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 LY96Q9Y6Y9 160 aa7.62□□□□□ -1.19
CDH3-210ENST00000569117 TRAV12-2A0A075B6T6 113 aa7.61□□□□□ -1.19
CDH3-210ENST00000569117 TMEM218A2RU14 115 aa7.61□□□□□ -1.19
CDH3-210ENST00000569117 GPX1P07203 203 aa7.61□□□□□ -1.19
CDH3-210ENST00000569117 BTN1A1Q13410 526 aa7.61□□□□□ -1.19
CDH3-210ENST00000569117 Q6AWC8 147 aa7.61□□□□□ -1.19
CDH3-210ENST00000569117 NHLRC2Q8NBF2 726 aa7.61□□□□□ -1.19
CDH3-210ENST00000569117 CSNK1G2-AS1Q8NCQ2 148 aa7.61□□□□□ -1.19
CDH3-210ENST00000569117 MRAPQ8TCY5 172 aa7.61□□□□□ -1.19
CDH3-210ENST00000569117 C9orf118A6NHY6 69 aa7.6□□□□□ -1.19
CDH3-210ENST00000569117 GCGP01275 180 aa7.6□□□□□ -1.19
CDH3-210ENST00000569117 PFN1P07737 140 aaKnown RBP7.6□□□□□ -1.19
CDH3-210ENST00000569117 RBMY1A1P0DJD3 496 aaKnown RBP7.6□□□□□ -1.19
CDH3-210ENST00000569117 RBMY1CP0DJD4 496 aa7.6□□□□□ -1.19
CDH3-210ENST00000569117 ADCYAP1P18509 176 aa7.6□□□□□ -1.19
CDH3-210ENST00000569117 DEFA6Q01524 100 aa7.6□□□□□ -1.19
CDH3-210ENST00000569117 RBMY1FQ15415 496 aaKnown RBP7.6□□□□□ -1.19
CDH3-210ENST00000569117 Q6ZWC4 215 aa7.6□□□□□ -1.19
CDH3-210ENST00000569117 LINC01551Q86U37 167 aa7.6□□□□□ -1.19
CDH3-210ENST00000569117 TMEM256Q8N2U0 113 aa7.6□□□□□ -1.19
CDH3-210ENST00000569117 NAT8Q9UHE5 227 aa7.6□□□□□ -1.19
CDH3-210ENST00000569117 TRAV12-3A0A0B4J271 114 aa7.59□□□□□ -1.19
CDH3-210ENST00000569117 TRAV21A0A0B4J279 112 aa7.59□□□□□ -1.19
CDH3-210ENST00000569117 K7EN84 100 aa7.59□□□□□ -1.19
CDH3-210ENST00000569117 GCSHP23434 173 aa7.59□□□□□ -1.19
CDH3-210ENST00000569117 RNASE4P34096 147 aaKnown RBP7.59□□□□□ -1.19
CDH3-210ENST00000569117 ZNF80P51504 273 aaPredicted RBP7.59□□□□□ -1.19
CDH3-210ENST00000569117 DEFB135Q30KP9 77 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms