RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ZNF767PQ75MW2 155 aa12.12□□□□□ -0.47
COMMD4-224ENST00000568877 C2CD4CQ8TF44 421 aa12.12□□□□□ -0.47
COMMD4-224ENST00000568877 LINC01587Q99440 93 aa12.12□□□□□ -0.47
COMMD4-224ENST00000568877 NEU1Q99519 415 aa12.12□□□□□ -0.47
COMMD4-224ENST00000568877 TRBV6-1A0A0K0K1D8 114 aa12.11□□□□□ -0.47
COMMD4-224ENST00000568877 SMIM9A6NGZ8 99 aa12.11□□□□□ -0.47
COMMD4-224ENST00000568877 H7BYZ3 331 aa12.11□□□□□ -0.47
COMMD4-224ENST00000568877 ZNF324O75467 553 aaPredicted RBP12.11□□□□□ -0.47
COMMD4-224ENST00000568877 S100A9P06702 114 aaKnown RBP12.11□□□□□ -0.47
COMMD4-224ENST00000568877 MIFP14174 115 aa12.11□□□□□ -0.47
COMMD4-224ENST00000568877 UBE2G1P62253 170 aa12.11□□□□□ -0.47
COMMD4-224ENST00000568877 TMEM183BQ1AE95 376 aa12.11□□□□□ -0.47
COMMD4-224ENST00000568877 Q86TA4 180 aa12.11□□□□□ -0.47
COMMD4-224ENST00000568877 C11orf52Q96A22 123 aa12.11□□□□□ -0.47
COMMD4-224ENST00000568877 NIPSNAP3BQ9BS92 247 aa12.11□□□□□ -0.47
COMMD4-224ENST00000568877 RAB14P61106 215 aa12.1□□□□□ -0.47
COMMD4-224ENST00000568877 ZNF506Q5JVG8 444 aa12.1□□□□□ -0.47
COMMD4-224ENST00000568877 FAM210AQ96ND0 272 aa12.1□□□□□ -0.47
COMMD4-224ENST00000568877 C8orf49Q96NF6 230 aa12.1□□□□□ -0.47
COMMD4-224ENST00000568877 IGHV4-28A0A0C4DH34 117 aa12.09□□□□□ -0.47
COMMD4-224ENST00000568877 TAS2R60P59551 318 aa12.09□□□□□ -0.47
COMMD4-224ENST00000568877 TOR2AQ5JU69 321 aa12.09□□□□□ -0.47
COMMD4-224ENST00000568877 Q8NAQ8 132 aa12.09□□□□□ -0.47
COMMD4-224ENST00000568877 EIF5A2Q9GZV4 153 aaKnown RBP12.09□□□□□ -0.47
COMMD4-224ENST00000568877 ZFP30Q9Y2G7 519 aa12.09□□□□□ -0.47
COMMD4-224ENST00000568877 A0A0J9YWU9 116 aa12.08□□□□□ -0.48
COMMD4-224ENST00000568877 ZNF705GA8MUZ8 300 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-224ENST00000568877 LTAP01374 205 aa12.08□□□□□ -0.48
COMMD4-224ENST00000568877 PRM2P04554 102 aa12.08□□□□□ -0.48
COMMD4-224ENST00000568877 RRN3P1Q2M238 152 aa12.08□□□□□ -0.48
COMMD4-224ENST00000568877 SMUG1Q53HV7 270 aa12.08□□□□□ -0.48
COMMD4-224ENST00000568877 Q6AWC8 147 aa12.08□□□□□ -0.48
COMMD4-224ENST00000568877 Q6ZQT7 251 aa12.08□□□□□ -0.48
COMMD4-224ENST00000568877 PYGO2Q9BRQ0 406 aa12.08□□□□□ -0.48
COMMD4-224ENST00000568877 MED9Q9NWA0 146 aa12.08□□□□□ -0.48
COMMD4-224ENST00000568877 GCGP01275 180 aa12.07□□□□□ -0.48
COMMD4-224ENST00000568877 HTN1P15515 57 aa12.07□□□□□ -0.48
COMMD4-224ENST00000568877 RPL35P42766 123 aaKnown RBP12.07□□□□□ -0.48
COMMD4-224ENST00000568877 DERL1Q9BUN8 251 aa12.07□□□□□ -0.48
COMMD4-224ENST00000568877 EDA2RQ9HAV5 297 aa12.07□□□□□ -0.48
COMMD4-224ENST00000568877 TENM3Q9P273 2699 aa12.06□□□□□ -0.48
COMMD4-224ENST00000568877 TRAV21A0A0B4J279 112 aa12.06□□□□□ -0.48
COMMD4-224ENST00000568877 DEFB4AO15263 64 aa12.06□□□□□ -0.48
COMMD4-224ENST00000568877 ZNF80P51504 273 aaPredicted RBP12.06□□□□□ -0.48
COMMD4-224ENST00000568877 CLLU1Q5K131 121 aa12.06□□□□□ -0.48
COMMD4-224ENST00000568877 COX8CQ7Z4L0 72 aa12.06□□□□□ -0.48
COMMD4-224ENST00000568877 BAGE2Q86Y30 109 aa12.06□□□□□ -0.48
COMMD4-224ENST00000568877 LINC00467Q9BRT7 94 aa12.06□□□□□ -0.48
COMMD4-224ENST00000568877 C11orf68Q9H3H3 251 aaKnown RBP12.06□□□□□ -0.48
COMMD4-224ENST00000568877 TGP01266 2768 aa12.06□□□□□ -0.48
COMMD4-224ENST00000568877 TMEM250H0YL14 139 aa12.05□□□□□ -0.48
COMMD4-224ENST00000568877 RGS13O14921 159 aa12.05□□□□□ -0.48
COMMD4-224ENST00000568877 NDUFS6O75380 124 aaKnown RBP12.05□□□□□ -0.48
COMMD4-224ENST00000568877 AZU1P20160 251 aa12.05□□□□□ -0.48
COMMD4-224ENST00000568877 TMEM183AQ8IXX5 376 aa12.05□□□□□ -0.48
COMMD4-224ENST00000568877 IGHV1OR15-1A0A075B7D0 117 aa12.04□□□□□ -0.48
COMMD4-224ENST00000568877 TMEM189A5PLL7 270 aa12.04□□□□□ -0.48
COMMD4-224ENST00000568877 PFN1P07737 140 aaKnown RBP12.04□□□□□ -0.48
COMMD4-224ENST00000568877 MUC21Q5SSG8 566 aa12.04□□□□□ -0.48
COMMD4-224ENST00000568877 ZNF493Q6ZR52 646 aa12.04□□□□□ -0.48
COMMD4-224ENST00000568877 EIF4E3Q8N5X7 224 aaKnown RBP12.04□□□□□ -0.48
COMMD4-224ENST00000568877 RAB19A4D1S5 217 aa12.03□□□□□ -0.48
COMMD4-224ENST00000568877 CBY3A6NI87 242 aa12.03□□□□□ -0.48
COMMD4-224ENST00000568877 ANXA2RQ3ZCQ2 193 aa12.03□□□□□ -0.48
COMMD4-224ENST00000568877 CENPWQ5EE01 88 aa12.03□□□□□ -0.48
COMMD4-224ENST00000568877 FAM159AQ6UWV7 190 aa12.03□□□□□ -0.48
COMMD4-224ENST00000568877 NHLRC2Q8NBF2 726 aa12.03□□□□□ -0.48
COMMD4-224ENST00000568877 TMEM263Q8WUH6 116 aaKnown RBP12.03□□□□□ -0.48
COMMD4-224ENST00000568877 C16orf74Q96GX8 76 aa12.03□□□□□ -0.48
COMMD4-224ENST00000568877 ZC2HC1AQ96GY0 325 aa12.03□□□□□ -0.48
COMMD4-224ENST00000568877 MLST8Q9BVC4 326 aa12.03□□□□□ -0.48
COMMD4-224ENST00000568877 FABP5P3A8MUU1 101 aa12.02□□□□□ -0.49
COMMD4-224ENST00000568877 SRP19P09132 144 aaKnown RBP12.02□□□□□ -0.49
COMMD4-224ENST00000568877 GNG4P50150 75 aa12.02□□□□□ -0.49
COMMD4-224ENST00000568877 CRIP1P50238 77 aa12.02□□□□□ -0.49
COMMD4-224ENST00000568877 EMP1P54849 157 aa12.02□□□□□ -0.49
COMMD4-224ENST00000568877 PEA15Q15121 130 aa12.02□□□□□ -0.49
COMMD4-224ENST00000568877 RNASE8Q8TDE3 154 aaKnown RBP12.02□□□□□ -0.49
COMMD4-224ENST00000568877 NAGKQ9UJ70 344 aa12.02□□□□□ -0.49
COMMD4-224ENST00000568877 PLAC8L1A1L4L8 177 aa12.01□□□□□ -0.49
COMMD4-224ENST00000568877 CEBPGP53567 150 aa12.01□□□□□ -0.49
COMMD4-224ENST00000568877 TDRG1Q3Y452 100 aa12.01□□□□□ -0.49
COMMD4-224ENST00000568877 WWC2-AS2Q96NR7 200 aa12.01□□□□□ -0.49
COMMD4-224ENST00000568877 PARLQ9H300 379 aa12.01□□□□□ -0.49
COMMD4-224ENST00000568877 SMDT1Q9H4I9 107 aa12.01□□□□□ -0.49
COMMD4-224ENST00000568877 TP53TG3Q9ULZ0 132 aa12.01□□□□□ -0.49
COMMD4-224ENST00000568877 TRBV20OR9-2A0A075B6H5 130 aa12□□□□□ -0.49
COMMD4-224ENST00000568877 IGLV2-8P01709 118 aa12□□□□□ -0.49
COMMD4-224ENST00000568877 SRSF3P84103 164 aaKnown RBP12□□□□□ -0.49
COMMD4-224ENST00000568877 ZNF674Q2M3X9 581 aa12□□□□□ -0.49
COMMD4-224ENST00000568877 FAM162BQ5T6X4 162 aa12□□□□□ -0.49
COMMD4-224ENST00000568877 SMIM12Q96EX1 92 aa12□□□□□ -0.49
COMMD4-224ENST00000568877 KCNS1Q96KK3 526 aa12□□□□□ -0.49
COMMD4-224ENST00000568877 C11orf21Q9P2W6 132 aa12□□□□□ -0.49
COMMD4-224ENST00000568877 C9JCJ5 164 aa11.99□□□□□ -0.49
COMMD4-224ENST00000568877 C9JQL5 133 aa11.99□□□□□ -0.49
COMMD4-224ENST00000568877 SH2D1AO60880 128 aa11.99□□□□□ -0.49
COMMD4-224ENST00000568877 SPART-AS1P0CW21 52 aa11.99□□□□□ -0.49
COMMD4-224ENST00000568877 IL17DQ8TAD2 202 aa11.99□□□□□ -0.49
COMMD4-224ENST00000568877 C11orf45Q8TAV5 145 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms