RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 CRYGDP07320 174 aa10.63□□□□□ -0.71
HERPUD1-215ENST00000568676 HBG1P69891 147 aa10.63□□□□□ -0.71
HERPUD1-215ENST00000568676 HBG2P69892 147 aa10.63□□□□□ -0.71
HERPUD1-215ENST00000568676 BAXQ07812 192 aa10.63□□□□□ -0.71
HERPUD1-215ENST00000568676 WFDC10BQ8IUB3 73 aa10.63□□□□□ -0.71
HERPUD1-215ENST00000568676 SPXQ9BT56 116 aa10.63□□□□□ -0.71
HERPUD1-215ENST00000568676 MDFICQ9P1T7 246 aa10.63□□□□□ -0.71
HERPUD1-215ENST00000568676 FAM240BA0A1B0GVZ2 78 aa10.62□□□□□ -0.71
HERPUD1-215ENST00000568676 E5RGE8 158 aa10.62□□□□□ -0.71
HERPUD1-215ENST00000568676 J3QL48 77 aa10.62□□□□□ -0.71
HERPUD1-215ENST00000568676 PSCAO43653 123 aa10.62□□□□□ -0.71
HERPUD1-215ENST00000568676 UPK1BO75841 260 aa10.62□□□□□ -0.71
HERPUD1-215ENST00000568676 CST7O76096 145 aa10.62□□□□□ -0.71
HERPUD1-215ENST00000568676 SULT1A1P50225 295 aa10.62□□□□□ -0.71
HERPUD1-215ENST00000568676 ZNF138P52744 262 aa10.62□□□□□ -0.71
HERPUD1-215ENST00000568676 ATP6V1FQ16864 119 aa10.62□□□□□ -0.71
HERPUD1-215ENST00000568676 EXOC3-AS1Q8N2X6 119 aa10.62□□□□□ -0.71
HERPUD1-215ENST00000568676 RASL10AQ92737 203 aa10.62□□□□□ -0.71
HERPUD1-215ENST00000568676 LSM5Q9Y4Y9 91 aaKnown RBP10.62□□□□□ -0.71
HERPUD1-215ENST00000568676 UBE2L5PA0A1B0GUS4 154 aa10.61□□□□□ -0.71
HERPUD1-215ENST00000568676 C1QBP02746 253 aa10.61□□□□□ -0.71
HERPUD1-215ENST00000568676 TCRBP04435 133 aa10.61□□□□□ -0.71
HERPUD1-215ENST00000568676 GYPEP15421 78 aa10.61□□□□□ -0.71
HERPUD1-215ENST00000568676 TIRAPP58753 221 aa10.61□□□□□ -0.71
HERPUD1-215ENST00000568676 ASAH1Q13510 395 aa10.61□□□□□ -0.71
HERPUD1-215ENST00000568676 STX12Q86Y82 276 aa10.61□□□□□ -0.71
HERPUD1-215ENST00000568676 BLNKQ8WV28 456 aa10.61□□□□□ -0.71
HERPUD1-215ENST00000568676 GPN1Q9HCN4 374 aaPredicted RBP10.61□□□□□ -0.71
HERPUD1-215ENST00000568676 LYRM2Q9NU23 88 aaPredicted RBP10.61□□□□□ -0.71
HERPUD1-215ENST00000568676 SRRM2Q9UQ35 2752 aaKnown RBP10.6□□□□□ -0.71
HERPUD1-215ENST00000568676 IGKV2-40A0A087WW87 121 aaPredicted RBP10.6□□□□□ -0.71
HERPUD1-215ENST00000568676 RBAKDNA6NC62 111 aa10.6□□□□□ -0.71
HERPUD1-215ENST00000568676 IGKV2D-40P01614 121 aaPredicted RBP10.6□□□□□ -0.71
HERPUD1-215ENST00000568676 PYYP10082 97 aa10.6□□□□□ -0.71
HERPUD1-215ENST00000568676 ZNF266Q14584 549 aa10.6□□□□□ -0.71
HERPUD1-215ENST00000568676 PRR9Q5T870 116 aa10.6□□□□□ -0.71
HERPUD1-215ENST00000568676 ZNF479Q96JC4 524 aa10.6□□□□□ -0.71
HERPUD1-215ENST00000568676 C11orf1Q9H5F2 150 aa10.6□□□□□ -0.71
HERPUD1-215ENST00000568676 FLG2Q5D862 2391 aaPredicted RBP10.6□□□□□ -0.71
HERPUD1-215ENST00000568676 TRGV11A0A075B6L2 103 aa10.59□□□□□ -0.71
HERPUD1-215ENST00000568676 IGHV3-38A0A0C4DH36 116 aa10.59□□□□□ -0.71
HERPUD1-215ENST00000568676 LRCOL1A6NCL2 159 aa10.59□□□□□ -0.71
HERPUD1-215ENST00000568676 FAM24AA6NFZ4 105 aa10.59□□□□□ -0.71
HERPUD1-215ENST00000568676 NBEAP1P0C6P0 100 aa10.59□□□□□ -0.71
HERPUD1-215ENST00000568676 FGF7P21781 194 aa10.59□□□□□ -0.71
HERPUD1-215ENST00000568676 DEFA1P59665 94 aa10.59□□□□□ -0.71
HERPUD1-215ENST00000568676 DEFA3P59666 94 aa10.59□□□□□ -0.71
HERPUD1-215ENST00000568676 FAM122CQ6P4D5 195 aa10.59□□□□□ -0.71
HERPUD1-215ENST00000568676 ENKURQ8TC29 256 aa10.59□□□□□ -0.71
HERPUD1-215ENST00000568676 NUDT15Q9NV35 164 aa10.59□□□□□ -0.71
HERPUD1-215ENST00000568676 LENEPQ9Y5L5 61 aa10.59□□□□□ -0.71
HERPUD1-215ENST00000568676 TRAV6A0A075B6T7 132 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 TRAV4A0A0B4J268 109 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 C5orf51A6NDU8 294 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 FAM25EA8MYX2 175 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 H2AFB2P0C5Z0 115 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 SFTA3P0C7M3 94 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 CSN1S1P47710 185 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 LINC01556Q5JQF7 62 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 Q6AWC8 147 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 FAM159AQ6UWV7 190 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 TMEM252Q8N6L7 170 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 C2orf50Q96LR7 162 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 SLC25A2Q9BXI2 301 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 OR51M1Q9H341 326 aa10.58□□□□□ -0.72
HERPUD1-215ENST00000568676 IBA57-AS1B1ANH7 110 aa10.57□□□□□ -0.72
HERPUD1-215ENST00000568676 CCSO14618 274 aa10.57□□□□□ -0.72
HERPUD1-215ENST00000568676 PLA2G1BP04054 148 aaKnown RBP10.57□□□□□ -0.72
HERPUD1-215ENST00000568676 Q8N814 137 aa10.57□□□□□ -0.72
HERPUD1-215ENST00000568676 NPCDR1Q9BY65 106 aa10.57□□□□□ -0.72
HERPUD1-215ENST00000568676 SLC25A31Q9H0C2 315 aa10.57□□□□□ -0.72
HERPUD1-215ENST00000568676 TDRG1Q3Y452 100 aa10.56□□□□□ -0.72
HERPUD1-215ENST00000568676 MUC21Q5SSG8 566 aa10.56□□□□□ -0.72
HERPUD1-215ENST00000568676 Q6ZQT7 251 aa10.56□□□□□ -0.72
HERPUD1-215ENST00000568676 OR4C5Q8NGB2 326 aa10.56□□□□□ -0.72
HERPUD1-215ENST00000568676 FAM167A-AS1Q96KT0 104 aa10.56□□□□□ -0.72
HERPUD1-215ENST00000568676 KCNIP2Q9NS61 270 aa10.56□□□□□ -0.72
HERPUD1-215ENST00000568676 TRAV8-6A0A0B4J262 113 aa10.55□□□□□ -0.72
HERPUD1-215ENST00000568676 IGSF23A1L1A6 192 aa10.55□□□□□ -0.72
HERPUD1-215ENST00000568676 PPT1P50897 306 aa10.55□□□□□ -0.72
HERPUD1-215ENST00000568676 Q8TAT8 98 aa10.55□□□□□ -0.72
HERPUD1-215ENST00000568676 TMED6Q8WW62 240 aa10.55□□□□□ -0.72
HERPUD1-215ENST00000568676 PAXXQ9BUH6 204 aa10.55□□□□□ -0.72
HERPUD1-215ENST00000568676 KRTAP29-1A8MX34 341 aaPredicted RBP10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 M0R2P5 195 aa10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 CIDEAO60543 219 aa10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 PFN1P07737 140 aaKnown RBP10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 S100A10P60903 97 aa10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 HAMPP81172 84 aa10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 IFITM3Q01628 133 aa10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 TMEM183BQ1AE95 376 aa10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 GCSAMLQ5JQS6 135 aa10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 TMEM183AQ8IXX5 376 aa10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 NHLRC2Q8NBF2 726 aa10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 DEFB104AQ8WTQ1 72 aa10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 FXYD5Q96DB9 178 aa10.54□□□□□ -0.72
HERPUD1-215ENST00000568676 LAGE3Q14657 143 aa10.53□□□□□ -0.72
HERPUD1-215ENST00000568676 MIR17HGQ75NE6 70 aa10.53□□□□□ -0.72
HERPUD1-215ENST00000568676 TM2D2Q9BX73 214 aa10.53□□□□□ -0.72
HERPUD1-215ENST00000568676 OR10J4P0C629 311 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms