RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 SPINK4O60575 86 aa20.5■□□□□ 0.87
RAB40C-211ENST00000568586 NUDT3O95989 172 aa20.5■□□□□ 0.87
RAB40C-211ENST00000568586 FAM74A1Q5RGS3 127 aa20.5■□□□□ 0.87
RAB40C-211ENST00000568586 TNFSF18Q9UNG2 199 aa20.5■□□□□ 0.87
RAB40C-211ENST00000568586 RTL8CO15255 209 aa20.49■□□□□ 0.87
RAB40C-211ENST00000568586 MBP02144 154 aa20.49■□□□□ 0.87
RAB40C-211ENST00000568586 CDC34P49427 236 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-211ENST00000568586 OR5I1Q13606 314 aa20.49■□□□□ 0.87
RAB40C-211ENST00000568586 Q6AWC8 147 aa20.49■□□□□ 0.87
RAB40C-211ENST00000568586 INO80EQ8NBZ0 244 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-211ENST00000568586 ATG101Q9BSB4 218 aa20.49■□□□□ 0.87
RAB40C-211ENST00000568586 TP53TG3Q9ULZ0 132 aa20.49■□□□□ 0.87
RAB40C-211ENST00000568586 KLF12Q9Y4X4 402 aa20.49■□□□□ 0.87
RAB40C-211ENST00000568586 TRAV26-1A0A087WT03 109 aa20.48■□□□□ 0.87
RAB40C-211ENST00000568586 CMTM2Q8TAZ6 248 aa20.48■□□□□ 0.87
RAB40C-211ENST00000568586 RAB24Q969Q5 203 aa20.48■□□□□ 0.87
RAB40C-211ENST00000568586 HYLS1Q96M11 299 aa20.48■□□□□ 0.87
RAB40C-211ENST00000568586 TMPRSS5Q9H3S3 457 aa20.48■□□□□ 0.87
RAB40C-211ENST00000568586 IGLV2-18A0A075B6J9 118 aa20.47■□□□□ 0.87
RAB40C-211ENST00000568586 ARL14EPLP0DKL9 152 aa20.47■□□□□ 0.87
RAB40C-211ENST00000568586 OR2T35Q8NGX2 323 aa20.47■□□□□ 0.87
RAB40C-211ENST00000568586 ZNRF2Q8NHG8 242 aa20.47■□□□□ 0.87
RAB40C-211ENST00000568586 GNPNAT1Q96EK6 184 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-211ENST00000568586 G3V3Q6 166 aa20.46■□□□□ 0.87
RAB40C-211ENST00000568586 HMGB3O15347 200 aaKnown RBP20.46■□□□□ 0.87
RAB40C-211ENST00000568586 CCL18P55774 89 aa20.46■□□□□ 0.87
RAB40C-211ENST00000568586 TRGV1A0A0A0MS02 117 aa20.45■□□□□ 0.86
RAB40C-211ENST00000568586 ST6GAL2Q96JF0 529 aa20.45■□□□□ 0.86
RAB40C-211ENST00000568586 SH3BGRL3Q9H299 93 aa20.45■□□□□ 0.86
RAB40C-211ENST00000568586 LINC00588Q9Y4M8 146 aa20.45■□□□□ 0.86
RAB40C-211ENST00000568586 PKD1P98161 4303 aa20.44■□□□□ 0.86
RAB40C-211ENST00000568586 PKHD1P08F94 4074 aa20.44■□□□□ 0.86
RAB40C-211ENST00000568586 TRGV2A0A075B6R0 118 aa20.44■□□□□ 0.86
RAB40C-211ENST00000568586 A0A1B0GVY2 172 aa20.44■□□□□ 0.86
RAB40C-211ENST00000568586 MUC4Q99102 2169 aa20.44■□□□□ 0.86
RAB40C-211ENST00000568586 FXYD6-FXYD2A0A087WZ82 144 aa20.43■□□□□ 0.86
RAB40C-211ENST00000568586 RPL7L1Q6DKI1 246 aaKnown RBP20.43■□□□□ 0.86
RAB40C-211ENST00000568586 GOLT1AQ6ZVE7 132 aa20.43■□□□□ 0.86
RAB40C-211ENST00000568586 ARPC5LQ9BPX5 153 aa20.43■□□□□ 0.86
RAB40C-211ENST00000568586 GCHFRP30047 84 aa20.42■□□□□ 0.86
RAB40C-211ENST00000568586 TDRG1Q3Y452 100 aa20.42■□□□□ 0.86
RAB40C-211ENST00000568586 SERTM2A0A1B0GWG4 89 aa20.41■□□□□ 0.86
RAB40C-211ENST00000568586 TVP23CQ96ET8 276 aa20.41■□□□□ 0.86
RAB40C-211ENST00000568586 VSIG2Q96IQ7 327 aa20.41■□□□□ 0.86
RAB40C-211ENST00000568586 ACTR3CQ9C0K3 210 aaPredicted RBP20.41■□□□□ 0.86
RAB40C-211ENST00000568586 BORCS7-ASMTA0A0B4J1R7 106 aa20.4■□□□□ 0.86
RAB40C-211ENST00000568586 A0A0J9YY99 117 aa20.4■□□□□ 0.86
RAB40C-211ENST00000568586 ZNF415Q09FC8 603 aa20.4■□□□□ 0.86
RAB40C-211ENST00000568586 CXorf1O96002 111 aa20.39■□□□□ 0.85
RAB40C-211ENST00000568586 MUC21Q5SSG8 566 aa20.39■□□□□ 0.85
RAB40C-211ENST00000568586 SSX7Q7RTT5 188 aa20.39■□□□□ 0.85
RAB40C-211ENST00000568586 C5orf17Q8NAS9 161 aa20.39■□□□□ 0.85
RAB40C-211ENST00000568586 TMEM167BQ9NRX6 74 aa20.39■□□□□ 0.85
RAB40C-211ENST00000568586 MDFICQ9P1T7 246 aa20.39■□□□□ 0.85
RAB40C-211ENST00000568586 RPH3ALQ9UNE2 315 aa20.39■□□□□ 0.85
RAB40C-211ENST00000568586 TRAV8-1A0A0A6YYK1 113 aa20.38■□□□□ 0.85
RAB40C-211ENST00000568586 PRSS29PA6NIE9 313 aa20.38■□□□□ 0.85
RAB40C-211ENST00000568586 GNG5P63218 68 aa20.38■□□□□ 0.85
RAB40C-211ENST00000568586 NBDYA0A0U1RRE5 68 aa20.37■□□□□ 0.85
RAB40C-211ENST00000568586 TCRAP04437 139 aa20.37■□□□□ 0.85
RAB40C-211ENST00000568586 FAM159AQ6UWV7 190 aa20.37■□□□□ 0.85
RAB40C-211ENST00000568586 MRPL16Q9NX20 251 aaKnown RBP20.37■□□□□ 0.85
RAB40C-211ENST00000568586 TAAR5O14804 337 aa20.36■□□□□ 0.85
RAB40C-211ENST00000568586 SOHLH1Q5JUK2 328 aa20.36■□□□□ 0.85
RAB40C-211ENST00000568586 C1orf134Q5TEV5 83 aa20.36■□□□□ 0.85
RAB40C-211ENST00000568586 RASL10AQ92737 203 aa20.36■□□□□ 0.85
RAB40C-211ENST00000568586 SPXQ9BT56 116 aa20.36■□□□□ 0.85
RAB40C-211ENST00000568586 UPK3BQ9BT76 320 aa20.36■□□□□ 0.85
RAB40C-211ENST00000568586 TREM1Q9NP99 234 aa20.36■□□□□ 0.85
RAB40C-211ENST00000568586 DNAH11Q96DT5 4516 aa20.35■□□□□ 0.85
RAB40C-211ENST00000568586 TRGV11A0A075B6L2 103 aa20.35■□□□□ 0.85
RAB40C-211ENST00000568586 TRAV21A0A0B4J279 112 aa20.35■□□□□ 0.85
RAB40C-211ENST00000568586 ESRGQ1W209 222 aa20.35■□□□□ 0.85
RAB40C-211ENST00000568586 A0A096LPF7 62 aa20.34■□□□□ 0.85
RAB40C-211ENST00000568586 GGTLC3B5MD39 225 aa20.34■□□□□ 0.85
RAB40C-211ENST00000568586 ZNF726P1Q15940 193 aa20.34■□□□□ 0.85
RAB40C-211ENST00000568586 TMEM183BQ1AE95 376 aa20.34■□□□□ 0.85
RAB40C-211ENST00000568586 TMEM183AQ8IXX5 376 aa20.34■□□□□ 0.85
RAB40C-211ENST00000568586 CYTL1Q9NRR1 136 aa20.34■□□□□ 0.85
RAB40C-211ENST00000568586 HERC2O95714 4834 aa20.34■□□□□ 0.85
RAB40C-211ENST00000568586 A0A1W2PRE2 83 aa20.33■□□□□ 0.85
RAB40C-211ENST00000568586 SUMO1P63165 101 aaKnown RBP20.33■□□□□ 0.85
RAB40C-211ENST00000568586 SLAQ13239 276 aa20.33■□□□□ 0.85
RAB40C-211ENST00000568586 EPDR1Q9UM22 224 aa20.33■□□□□ 0.85
RAB40C-211ENST00000568586 CTXND1A0A1B0GTU2 59 aa20.32■□□□□ 0.84
RAB40C-211ENST00000568586 IGLV2-11P01706 119 aa20.32■□□□□ 0.84
RAB40C-211ENST00000568586 FHL2Q14192 279 aa20.32■□□□□ 0.84
RAB40C-211ENST00000568586 Q9H8V8 135 aa20.32■□□□□ 0.84
RAB40C-211ENST00000568586 PRO0255Q9UI72 69 aa20.32■□□□□ 0.84
RAB40C-211ENST00000568586 DYNC1H1Q14204 4646 aaKnown RBP20.32■□□□□ 0.84
RAB40C-211ENST00000568586 K7EQM0 130 aa20.31■□□□□ 0.84
RAB40C-211ENST00000568586 ARPC5O15511 151 aa20.31■□□□□ 0.84
RAB40C-211ENST00000568586 IQCF2Q8IXL9 164 aa20.31■□□□□ 0.84
RAB40C-211ENST00000568586 MRPS16Q9Y3D3 137 aaKnown RBP20.31■□□□□ 0.84
RAB40C-211ENST00000568586 IGHV3-16A0A0C4DH30 117 aa20.3■□□□□ 0.84
RAB40C-211ENST00000568586 FBLL1A6NHQ2 334 aaKnown RBP20.3■□□□□ 0.84
RAB40C-211ENST00000568586 F6UZH7 168 aa20.3■□□□□ 0.84
RAB40C-211ENST00000568586 NDFIP1Q9BT67 221 aa20.3■□□□□ 0.84
RAB40C-211ENST00000568586 GNRH2O43555 120 aa20.29■□□□□ 0.84
RAB40C-211ENST00000568586 CRYBA4P53673 196 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms