RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PDE6HQ13956 83 aa10.55□□□□□ -0.72
NME3-211ENST00000568561 FHL2Q14192 279 aa10.55□□□□□ -0.72
NME3-211ENST00000568561 TMEM78Q5T7P6 136 aa10.55□□□□□ -0.72
NME3-211ENST00000568561 Q5VSD8 79 aa10.55□□□□□ -0.72
NME3-211ENST00000568561 MIR17HGQ75NE6 70 aa10.55□□□□□ -0.72
NME3-211ENST00000568561 STX12Q86Y82 276 aa10.55□□□□□ -0.72
NME3-211ENST00000568561 C2orf50Q96LR7 162 aa10.55□□□□□ -0.72
NME3-211ENST00000568561 AAMDCQ9H7C9 122 aa10.55□□□□□ -0.72
NME3-211ENST00000568561 GPN1Q9HCN4 374 aaPredicted RBP10.55□□□□□ -0.72
NME3-211ENST00000568561 A0A087WTM6 91 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 E5RGE8 158 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 SFTA3P0C7M3 94 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 S100A11P31949 105 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 HAMPP81172 84 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 MUC21Q5SSG8 566 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 CDPF1Q6NVV7 123 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 WFDC10BQ8IUB3 73 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 THAP6Q8TBB0 222 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 FAM167A-AS1Q96KT0 104 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 NPCDR1Q9BY65 106 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 SRRM2Q9UQ35 2752 aaKnown RBP10.54□□□□□ -0.72
NME3-211ENST00000568561 HHLA3Q9XRX5 114 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 ALG5Q9Y673 324 aa10.54□□□□□ -0.72
NME3-211ENST00000568561 HBG1P69891 147 aa10.53□□□□□ -0.72
NME3-211ENST00000568561 HBG2P69892 147 aa10.53□□□□□ -0.72
NME3-211ENST00000568561 ZNF415Q09FC8 603 aa10.53□□□□□ -0.72
NME3-211ENST00000568561 MRPL23Q16540 153 aaKnown RBP10.53□□□□□ -0.72
NME3-211ENST00000568561 NEGR1Q7Z3B1 354 aa10.53□□□□□ -0.72
NME3-211ENST00000568561 PHYHIPLQ96FC7 376 aa10.53□□□□□ -0.72
NME3-211ENST00000568561 ZNF492Q9P255 531 aa10.53□□□□□ -0.72
NME3-211ENST00000568561 LY96Q9Y6Y9 160 aa10.53□□□□□ -0.72
NME3-211ENST00000568561 TRGV4A0A0C4DH28 118 aa10.52□□□□□ -0.73
NME3-211ENST00000568561 A0A1B0GVG6 124 aa10.52□□□□□ -0.73
NME3-211ENST00000568561 SMR3BP02814 79 aaPredicted RBP10.52□□□□□ -0.73
NME3-211ENST00000568561 OR10J4P0C629 311 aa10.52□□□□□ -0.73
NME3-211ENST00000568561 IL15RAQ13261 267 aa10.52□□□□□ -0.73
NME3-211ENST00000568561 NFE4Q86UQ8 179 aa10.52□□□□□ -0.73
NME3-211ENST00000568561 CHAC2Q8WUX2 184 aa10.52□□□□□ -0.73
NME3-211ENST00000568561 ZNF479Q96JC4 524 aa10.52□□□□□ -0.73
NME3-211ENST00000568561 MDFICQ9P1T7 246 aa10.52□□□□□ -0.73
NME3-211ENST00000568561 K7EQD1 137 aa10.51□□□□□ -0.73
NME3-211ENST00000568561 NMBP08949 121 aa10.51□□□□□ -0.73
NME3-211ENST00000568561 SRIP30626 198 aa10.51□□□□□ -0.73
NME3-211ENST00000568561 ZNF138P52744 262 aa10.51□□□□□ -0.73
NME3-211ENST00000568561 MSRB1Q9NZV6 116 aa10.51□□□□□ -0.73
NME3-211ENST00000568561 IFNA5P01569 189 aa10.5□□□□□ -0.73
NME3-211ENST00000568561 NBEAP1P0C6P0 100 aa10.5□□□□□ -0.73
NME3-211ENST00000568561 GYPEP15421 78 aa10.5□□□□□ -0.73
NME3-211ENST00000568561 NHLH2Q02577 135 aa10.5□□□□□ -0.73
NME3-211ENST00000568561 SLAQ13239 276 aa10.5□□□□□ -0.73
NME3-211ENST00000568561 ATP6V1FQ16864 119 aa10.5□□□□□ -0.73
NME3-211ENST00000568561 FRZBQ92765 325 aa10.5□□□□□ -0.73
NME3-211ENST00000568561 FXYD5Q96DB9 178 aa10.5□□□□□ -0.73
NME3-211ENST00000568561 OR51M1Q9H341 326 aa10.5□□□□□ -0.73
NME3-211ENST00000568561 TMEM183BQ1AE95 376 aa10.49□□□□□ -0.73
NME3-211ENST00000568561 TMEM183AQ8IXX5 376 aa10.49□□□□□ -0.73
NME3-211ENST00000568561 OR5C1Q8NGR4 320 aa10.49□□□□□ -0.73
NME3-211ENST00000568561 PCNPQ8WW12 178 aaKnown RBP10.49□□□□□ -0.73
NME3-211ENST00000568561 PAXXQ9BUH6 204 aa10.49□□□□□ -0.73
NME3-211ENST00000568561 MRPL32Q9BYC8 188 aaKnown RBP10.49□□□□□ -0.73
NME3-211ENST00000568561 DNAH8Q96JB1 4490 aa10.49□□□□□ -0.73
NME3-211ENST00000568561 TRAV9-2A0A087WT02 112 aa10.48□□□□□ -0.73
NME3-211ENST00000568561 LOC100131303A0A0U1RQF7 123 aa10.47□□□□□ -0.73
NME3-211ENST00000568561 SSNA1O43805 119 aa10.47□□□□□ -0.73
NME3-211ENST00000568561 OR7C2O60412 319 aa10.47□□□□□ -0.73
NME3-211ENST00000568561 EIF3GO75821 320 aaKnown RBP eCLIP10.47□□□□□ -0.73
NME3-211ENST00000568561 SIX6O95475 246 aa10.47□□□□□ -0.73
NME3-211ENST00000568561 EVI2AP22794 236 aa10.47□□□□□ -0.73
NME3-211ENST00000568561 RANP62826 216 aaKnown RBP10.47□□□□□ -0.73
NME3-211ENST00000568561 ZNF266Q14584 549 aa10.47□□□□□ -0.73
NME3-211ENST00000568561 OR10G4Q8NGN3 311 aa10.47□□□□□ -0.73
NME3-211ENST00000568561 SLC25A31Q9H0C2 315 aa10.47□□□□□ -0.73
NME3-211ENST00000568561 MED28Q9H204 178 aa10.47□□□□□ -0.73
NME3-211ENST00000568561 NAGKQ9UJ70 344 aa10.47□□□□□ -0.73
NME3-211ENST00000568561 hCG_2014768A0A024R1R8 64 aa10.46□□□□□ -0.73
NME3-211ENST00000568561 CRYGDP07320 174 aa10.46□□□□□ -0.73
NME3-211ENST00000568561 GCSHP23434 173 aa10.46□□□□□ -0.73
NME3-211ENST00000568561 UBE2L3P68036 154 aaKnown RBP10.46□□□□□ -0.73
NME3-211ENST00000568561 LRRC37A5PQ49AS3 106 aa10.46□□□□□ -0.73
NME3-211ENST00000568561 OR5AC2Q9NZP5 309 aa10.46□□□□□ -0.73
NME3-211ENST00000568561 TRBV7-9A0A0J9YWB2 115 aa10.45□□□□□ -0.74
NME3-211ENST00000568561 CSN1S1P47710 185 aa10.45□□□□□ -0.74
NME3-211ENST00000568561 FAM159AQ6UWV7 190 aa10.45□□□□□ -0.74
NME3-211ENST00000568561 RASL10AQ92737 203 aa10.45□□□□□ -0.74
NME3-211ENST00000568561 RPH3ALQ9UNE2 315 aa10.45□□□□□ -0.74
NME3-211ENST00000568561 TRGV11A0A075B6L2 103 aa10.44□□□□□ -0.74
NME3-211ENST00000568561 IGHV3-16A0A0C4DH30 117 aa10.44□□□□□ -0.74
NME3-211ENST00000568561 ORM1P02763 201 aa10.44□□□□□ -0.74
NME3-211ENST00000568561 Q6AWC8 147 aa10.44□□□□□ -0.74
NME3-211ENST00000568561 IQCF2Q8IXL9 164 aa10.44□□□□□ -0.74
NME3-211ENST00000568561 WDR61Q9GZS3 305 aaKnown RBP10.44□□□□□ -0.74
NME3-211ENST00000568561 RBAKDNA6NC62 111 aa10.43□□□□□ -0.74
NME3-211ENST00000568561 C9JCJ5 164 aa10.43□□□□□ -0.74
NME3-211ENST00000568561 DIRC3C9JPN6 131 aa10.43□□□□□ -0.74
NME3-211ENST00000568561 H0YIZ8 118 aa10.43□□□□□ -0.74
NME3-211ENST00000568561 GNRH2O43555 120 aa10.43□□□□□ -0.74
NME3-211ENST00000568561 NHLRC2Q8NBF2 726 aa10.43□□□□□ -0.74
NME3-211ENST00000568561 OR4C5Q8NGB2 326 aa10.43□□□□□ -0.74
NME3-211ENST00000568561 HYLS1Q96M11 299 aa10.43□□□□□ -0.74
NME3-211ENST00000568561 TXNDC17Q9BRA2 123 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms