RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	NDUFS6	O75380	124 aa	Known RBP	10.83	□□□□□ -0.68
KLHDC4-223	ENST00000568499	IGLV2-11	P01706	119 aa		10.83	□□□□□ -0.68
KLHDC4-223	ENST00000568499	MIF	P14174	115 aa		10.83	□□□□□ -0.68
KLHDC4-223	ENST00000568499	TAS2R60	P59551	318 aa		10.83	□□□□□ -0.68
KLHDC4-223	ENST00000568499	PEA15	Q15121	130 aa		10.83	□□□□□ -0.68
KLHDC4-223	ENST00000568499	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.83	□□□□□ -0.68
KLHDC4-223	ENST00000568499	ZFAND2A	Q8N6M9	145 aa		10.83	□□□□□ -0.68
KLHDC4-223	ENST00000568499	C2CD4C	Q8TF44	421 aa		10.83	□□□□□ -0.68
KLHDC4-223	ENST00000568499	NEU1	Q99519	415 aa		10.83	□□□□□ -0.68
KLHDC4-223	ENST00000568499	TRAV21	A0A0B4J279	112 aa		10.82	□□□□□ -0.68
KLHDC4-223	ENST00000568499	TMEM250	H0YL14	139 aa		10.82	□□□□□ -0.68
KLHDC4-223	ENST00000568499	BTN1A1	Q13410	526 aa		10.82	□□□□□ -0.68
KLHDC4-223	ENST00000568499	RRN3P1	Q2M238	152 aa		10.82	□□□□□ -0.68
KLHDC4-223	ENST00000568499	CLLU1	Q5K131	121 aa		10.82	□□□□□ -0.68
KLHDC4-223	ENST00000568499		Q86TA4	180 aa		10.82	□□□□□ -0.68
KLHDC4-223	ENST00000568499	C1orf158	Q8N1D5	194 aa		10.82	□□□□□ -0.68
KLHDC4-223	ENST00000568499	PYGO2	Q9BRQ0	406 aa		10.82	□□□□□ -0.68
KLHDC4-223	ENST00000568499	RGS13	O14921	159 aa		10.81	□□□□□ -0.68
KLHDC4-223	ENST00000568499	HTN1	P15515	57 aa		10.81	□□□□□ -0.68
KLHDC4-223	ENST00000568499	RPL35	P42766	123 aa	Known RBP	10.81	□□□□□ -0.68
KLHDC4-223	ENST00000568499	IFITM2	Q01629	132 aa		10.81	□□□□□ -0.68
KLHDC4-223	ENST00000568499	BAGE2	Q86Y30	109 aa		10.81	□□□□□ -0.68
KLHDC4-223	ENST00000568499	SMDT1	Q9H4I9	107 aa		10.81	□□□□□ -0.68
KLHDC4-223	ENST00000568499	TMEM189	A5PLL7	270 aa		10.8	□□□□□ -0.68
KLHDC4-223	ENST00000568499	GCG	P01275	180 aa		10.8	□□□□□ -0.68
KLHDC4-223	ENST00000568499	LTA	P01374	205 aa		10.8	□□□□□ -0.68
KLHDC4-223	ENST00000568499	KIR3DS1	Q14943	382 aa		10.8	□□□□□ -0.68
KLHDC4-223	ENST00000568499		Q6AWC8	147 aa		10.8	□□□□□ -0.68
KLHDC4-223	ENST00000568499	TVP23C	Q96ET8	276 aa		10.8	□□□□□ -0.68
KLHDC4-223	ENST00000568499	ZNF324	O75467	553 aa	Predicted RBP	10.79	□□□□□ -0.68
KLHDC4-223	ENST00000568499	GNG4	P50150	75 aa		10.79	□□□□□ -0.68
KLHDC4-223	ENST00000568499	CEBPG	P53567	150 aa		10.79	□□□□□ -0.68
KLHDC4-223	ENST00000568499	FAM159A	Q6UWV7	190 aa		10.79	□□□□□ -0.68
KLHDC4-223	ENST00000568499	TMEM183A	Q8IXX5	376 aa		10.79	□□□□□ -0.68
KLHDC4-223	ENST00000568499	C8orf49	Q96NF6	230 aa		10.79	□□□□□ -0.68
KLHDC4-223	ENST00000568499	BIN3	Q9NQY0	253 aa		10.79	□□□□□ -0.68
KLHDC4-223	ENST00000568499		X6R8D5	127 aa		10.79	□□□□□ -0.68
KLHDC4-223	ENST00000568499	IGHV1OR15-1	A0A075B7D0	117 aa		10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	CBY3	A6NI87	242 aa		10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	FABP5P3	A8MUU1	101 aa		10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	ZNF705G	A8MUZ8	300 aa	Predicted RBP	10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	PFN1	P07737	140 aa	Known RBP	10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	RBMY1A1	P0DJD3	496 aa	Known RBP	10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	RBMY1C	P0DJD4	496 aa		10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	RBMY1F	Q15415	496 aa	Known RBP	10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	PRR9	Q5T870	116 aa		10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	ZNF493	Q6ZR52	646 aa		10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	EIF4E3	Q8N5X7	224 aa	Known RBP	10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	SMIM12	Q96EX1	92 aa		10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	KCNS1	Q96KK3	526 aa		10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	LINC00467	Q9BRT7	94 aa		10.78	□□□□□ -0.68
KLHDC4-223	ENST00000568499	PRKDC	P78527	4128 aa	Known RBP	10.77	□□□□□ -0.69
KLHDC4-223	ENST00000568499	IGHV4-28	A0A0C4DH34	117 aa		10.77	□□□□□ -0.69
KLHDC4-223	ENST00000568499	ZNF674	Q2M3X9	581 aa		10.77	□□□□□ -0.69
KLHDC4-223	ENST00000568499	CENPW	Q5EE01	88 aa		10.77	□□□□□ -0.69
KLHDC4-223	ENST00000568499	FAM162B	Q5T6X4	162 aa		10.77	□□□□□ -0.69
KLHDC4-223	ENST00000568499	COX8C	Q7Z4L0	72 aa		10.77	□□□□□ -0.69
KLHDC4-223	ENST00000568499	C16orf74	Q96GX8	76 aa		10.77	□□□□□ -0.69
KLHDC4-223	ENST00000568499	DERL1	Q9BUN8	251 aa		10.77	□□□□□ -0.69
KLHDC4-223	ENST00000568499	C11orf68	Q9H3H3	251 aa	Known RBP	10.77	□□□□□ -0.69
KLHDC4-223	ENST00000568499	NAGK	Q9UJ70	344 aa		10.77	□□□□□ -0.69
KLHDC4-223	ENST00000568499	NBEAL2	Q6ZNJ1	2754 aa		10.77	□□□□□ -0.69
KLHDC4-223	ENST00000568499	RAB19	A4D1S5	217 aa		10.76	□□□□□ -0.69
KLHDC4-223	ENST00000568499		Q8NAQ8	132 aa		10.76	□□□□□ -0.69
KLHDC4-223	ENST00000568499	TMEM263	Q8WUH6	116 aa	Known RBP	10.76	□□□□□ -0.69
KLHDC4-223	ENST00000568499	PARL	Q9H300	379 aa		10.76	□□□□□ -0.69
KLHDC4-223	ENST00000568499	TRGV11	A0A075B6L2	103 aa		10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499		A0A0J9YWU9	116 aa		10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499	TEX48	A0A1B0GUV7	120 aa		10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499	SRP19	P09132	144 aa	Known RBP	10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499	MGST1	P10620	155 aa	Known RBP	10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499	EMP1	P54849	157 aa		10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499	ANXA2R	Q3ZCQ2	193 aa		10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499	FAM74A3	Q4VXF1	159 aa		10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499	MUC21	Q5SSG8	566 aa		10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499	NHLRC2	Q8NBF2	726 aa		10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499	DAZAP1	Q96EP5	407 aa	Known RBP	10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499	ZC2HC1A	Q96GY0	325 aa		10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499	SDF2L1	Q9HCN8	221 aa		10.75	□□□□□ -0.69
KLHDC4-223	ENST00000568499	ZNF727	A8MUV8	499 aa		10.74	□□□□□ -0.69
KLHDC4-223	ENST00000568499	SNURFL	B1AK76	121 aa		10.74	□□□□□ -0.69
KLHDC4-223	ENST00000568499		C9JCJ5	164 aa		10.74	□□□□□ -0.69
KLHDC4-223	ENST00000568499	ORM1	P02763	201 aa		10.74	□□□□□ -0.69
KLHDC4-223	ENST00000568499	ZNF80	P51504	273 aa	Predicted RBP	10.74	□□□□□ -0.69
KLHDC4-223	ENST00000568499	IL17D	Q8TAD2	202 aa		10.74	□□□□□ -0.69
KLHDC4-223	ENST00000568499	SMIM7	Q9BQ49	75 aa		10.74	□□□□□ -0.69
KLHDC4-223	ENST00000568499	MLST8	Q9BVC4	326 aa		10.74	□□□□□ -0.69
KLHDC4-223	ENST00000568499	DEFB4A	O15263	64 aa		10.73	□□□□□ -0.69
KLHDC4-223	ENST00000568499	SH2D1A	O60880	128 aa		10.73	□□□□□ -0.69
KLHDC4-223	ENST00000568499	SPART-AS1	P0CW21	52 aa		10.73	□□□□□ -0.69
KLHDC4-223	ENST00000568499	TDRG1	Q3Y452	100 aa		10.73	□□□□□ -0.69
KLHDC4-223	ENST00000568499	PRR27	Q6MZM9	219 aa		10.73	□□□□□ -0.69
KLHDC4-223	ENST00000568499	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.73	□□□□□ -0.69
KLHDC4-223	ENST00000568499	CXorf65	A6NEN9	183 aa		10.72	□□□□□ -0.69
KLHDC4-223	ENST00000568499	AZU1	P20160	251 aa		10.72	□□□□□ -0.69
KLHDC4-223	ENST00000568499	ZNF415	Q09FC8	603 aa		10.72	□□□□□ -0.69
KLHDC4-223	ENST00000568499	SOHLH1	Q5JUK2	328 aa		10.72	□□□□□ -0.69
KLHDC4-223	ENST00000568499	IBA57	Q5T440	356 aa	Known RBP	10.72	□□□□□ -0.69
KLHDC4-223	ENST00000568499	C11orf45	Q8TAV5	145 aa		10.72	□□□□□ -0.69
KLHDC4-223	ENST00000568499	RNASE8	Q8TDE3	154 aa	Known RBP	10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms