RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 LDLRAD2Q5SZI1 272 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 CLEC2AQ6UVW9 174 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 C2orf91Q6ZV80 131 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 OR11H1Q8NG94 326 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 OR11H2Q8NH07 326 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 Q8TAT8 98 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 TMEM158Q8WZ71 300 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 RNF185Q96GF1 192 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 ODF3Q96PU9 254 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 FOXC2Q99958 501 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 SMIM2Q9BVW6 85 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 AGPAT4-IT1Q9H0P7 198 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 VCX2Q9H322 139 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 ARFGEF3Q5TH69 2177 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 ZNF318Q5VUA4 2279 aa5.88□□□□□ -1.47
ATXN3-250ENST00000568290 RP1L1Q8IWN7 2480 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-250ENST00000568290 NAV3Q8IVL0 2385 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 A0A096LNJ9 63 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 A0A1W2PPM0 123 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 F8VRH5 84 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 IGHV3-23P01764 117 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 FGF6P10767 208 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 LMO4P61968 165 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 ANKRD39Q53RE8 183 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 ADAMTSL5Q6ZMM2 481 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 GLMPQ8WWB7 406 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 TMEM141Q96I45 108 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 SCGB3A1Q96QR1 104 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 KIR2DL4Q99706 377 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 CHAC1Q9BUX1 264 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 TM2D2Q9BX73 214 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 SPCS1Q9Y6A9 102 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 S4R3C0 116 aa5.87□□□□□ -1.47
ATXN3-250ENST00000568290 EYSQ5T1H1 3165 aa5.86□□□□□ -1.47
ATXN3-250ENST00000568290 EP300Q09472 2414 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-250ENST00000568290 ZGRF1Q86YA3 2104 aa5.86□□□□□ -1.47
ATXN3-250ENST00000568290 F8W1H4 67 aa5.86□□□□□ -1.47
ATXN3-250ENST00000568290 GCSHP23434 173 aa5.86□□□□□ -1.47
ATXN3-250ENST00000568290 ZFP36P26651 326 aaKnown RBP5.86□□□□□ -1.47
ATXN3-250ENST00000568290 ZNF80P51504 273 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-250ENST00000568290 DLX1P56177 255 aa5.86□□□□□ -1.47
ATXN3-250ENST00000568290 SUMO2P61956 95 aaKnown RBP5.86□□□□□ -1.47
ATXN3-250ENST00000568290 ERCC8Q13216 396 aa5.86□□□□□ -1.47
ATXN3-250ENST00000568290 ZC2HC1BQ5TFG8 222 aa5.86□□□□□ -1.47
ATXN3-250ENST00000568290 FAM159AQ6UWV7 190 aa5.86□□□□□ -1.47
ATXN3-250ENST00000568290 CEND1Q8N111 149 aa5.86□□□□□ -1.47
ATXN3-250ENST00000568290 TOMM6Q96B49 74 aa5.86□□□□□ -1.47
ATXN3-250ENST00000568290 CCDC140Q96MF4 163 aa5.86□□□□□ -1.47
ATXN3-250ENST00000568290 DAZ1Q9NQZ3 744 aaKnown RBP5.86□□□□□ -1.47
ATXN3-250ENST00000568290 CYSLTR1Q9Y271 337 aa5.86□□□□□ -1.47
ATXN3-250ENST00000568290 CHTOPQ9Y3Y2 248 aaKnown RBP5.86□□□□□ -1.47
ATXN3-250ENST00000568290 IGKV3D-20A0A0C4DH25 116 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 CLPSL1A2RUU4 121 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 TMEM8BA6NDV4 472 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 H3BUT2 72 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 VCYO14598 125 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 DUSP14O95147 198 aaKnown RBP5.85□□□□□ -1.47
ATXN3-250ENST00000568290 NCR2O95944 276 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 IGHG2P01859 326 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 IGHG4P01861 327 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 SNRPD3P62318 126 aaKnown RBP5.85□□□□□ -1.47
ATXN3-250ENST00000568290 RBX1P62877 108 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 PRB3Q04118 309 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-250ENST00000568290 RNF151Q2KHN1 245 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 TM4SF20Q53R12 229 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 APRG1Q8IVJ8 170 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 AJUBAQ96IF1 538 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 C18orf15Q96N68 181 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 HIST1H4GQ99525 98 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 BPESC1Q9GZL8 116 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 TMEM160Q9NX00 188 aa5.85□□□□□ -1.47
ATXN3-250ENST00000568290 CNOT1A5YKK6 2376 aaKnown RBP5.85□□□□□ -1.47
ATXN3-250ENST00000568290 IGLV2-18A0A075B6J9 118 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 TRBV25-1A0A075B6N4 114 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 IGHV7-4-1A0A0J9YVY3 117 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 MYMXA0A1B0GTQ4 84 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 SMKR1H3BMG3 65 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 J3QLI3 93 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 UQCRFS1P47985 274 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 RPL11P62913 178 aaKnown RBP5.84□□□□□ -1.47
ATXN3-250ENST00000568290 UFSP1Q6NVU6 142 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 Q8N3U1 123 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 TEX29Q8N6K0 151 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 NRACQ8N912 160 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 ITLN2Q8WWU7 325 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-250ENST00000568290 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.47
ATXN3-250ENST00000568290 ANKHD1Q8IWZ3 2542 aaKnown RBP5.83□□□□□ -1.48
ATXN3-250ENST00000568290 IGHV4OR15-8A0A075B7B6 117 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 A0A087WW49 117 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 TRAV8-2A0A0B4J237 113 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 TRAV8-6A0A0B4J262 113 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 TRAV40A0A0B4J280 105 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 B4DSR2 109 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 H3BVH4 76 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 LY6HO94772 140 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 PF4V1P10720 104 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 SCGB1A1P11684 91 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 TCTAP57738 103 aa5.83□□□□□ -1.48
ATXN3-250ENST00000568290 LOXL1Q08397 574 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms