RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 RPL11P62913 178 aaKnown RBP11.05□□□□□ -0.64
COMMD4-221ENST00000567935 KLF5Q13887 457 aaPredicted RBP11.05□□□□□ -0.64
COMMD4-221ENST00000567935 IGFL4Q6B9Z1 124 aa11.05□□□□□ -0.64
COMMD4-221ENST00000567935 RNF182Q8N6D2 247 aa11.05□□□□□ -0.64
COMMD4-221ENST00000567935 ZNF738Q8NE65 137 aa11.05□□□□□ -0.64
COMMD4-221ENST00000567935 DPF1Q92782 380 aa11.05□□□□□ -0.64
COMMD4-221ENST00000567935 LINC00477Q96M19 166 aa11.05□□□□□ -0.64
COMMD4-221ENST00000567935 PEMTQ9UBM1 199 aa11.05□□□□□ -0.64
COMMD4-221ENST00000567935 S100A8P05109 93 aa11.04□□□□□ -0.64
COMMD4-221ENST00000567935 SYNJ2BPP57105 145 aa11.04□□□□□ -0.64
COMMD4-221ENST00000567935 OR10J6PQ8NGY7 276 aa11.04□□□□□ -0.64
COMMD4-221ENST00000567935 C8orf49Q96NF6 230 aa11.04□□□□□ -0.64
COMMD4-221ENST00000567935 MRPL18Q9H0U6 180 aaKnown RBP11.04□□□□□ -0.64
COMMD4-221ENST00000567935 TMEM189A5PLL7 270 aa11.03□□□□□ -0.64
COMMD4-221ENST00000567935 FABP5P3A8MUU1 101 aa11.03□□□□□ -0.64
COMMD4-221ENST00000567935 PRAC2D3DTV9 90 aa11.03□□□□□ -0.64
COMMD4-221ENST00000567935 SH2D1AO60880 128 aa11.03□□□□□ -0.64
COMMD4-221ENST00000567935 CBLN1P23435 193 aa11.03□□□□□ -0.64
COMMD4-221ENST00000567935 CRIP1P50238 77 aa11.03□□□□□ -0.64
COMMD4-221ENST00000567935 HIST1H1AQ02539 215 aaPredicted RBP11.03□□□□□ -0.64
COMMD4-221ENST00000567935 TMEM136Q6ZRR5 245 aa11.03□□□□□ -0.64
COMMD4-221ENST00000567935 AGPAT4-IT1Q9H0P7 198 aa11.03□□□□□ -0.64
COMMD4-221ENST00000567935 A0A1B0GXF2 115 aa11.02□□□□□ -0.65
COMMD4-221ENST00000567935 C2orf70A6NJV1 201 aa11.02□□□□□ -0.65
COMMD4-221ENST00000567935 HBBP68871 147 aa11.02□□□□□ -0.65
COMMD4-221ENST00000567935 TCTEX1D4Q5JR98 221 aa11.02□□□□□ -0.65
COMMD4-221ENST00000567935 MRPL54Q6P161 138 aaKnown RBP11.02□□□□□ -0.65
COMMD4-221ENST00000567935 OR1N2Q8NGR9 330 aa11.02□□□□□ -0.65
COMMD4-221ENST00000567935 Q8TAT8 98 aa11.02□□□□□ -0.65
COMMD4-221ENST00000567935 GTSF1Q8WW33 167 aa11.02□□□□□ -0.65
COMMD4-221ENST00000567935 BORCS7Q96B45 105 aa11.02□□□□□ -0.65
COMMD4-221ENST00000567935 TRAV2A0A0B4J234 112 aa11.01□□□□□ -0.65
COMMD4-221ENST00000567935 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
COMMD4-221ENST00000567935 RIGQ13278 110 aa11.01□□□□□ -0.65
COMMD4-221ENST00000567935 KHDC1LQ5JSQ8 128 aa11.01□□□□□ -0.65
COMMD4-221ENST00000567935 KLHL30-AS1Q8NEE0 82 aa11.01□□□□□ -0.65
COMMD4-221ENST00000567935 DCANP1Q8TF63 244 aa11.01□□□□□ -0.65
COMMD4-221ENST00000567935 RYR2Q92736 4967 aa11□□□□□ -0.65
COMMD4-221ENST00000567935 RAB4BP61018 213 aa11□□□□□ -0.65
COMMD4-221ENST00000567935 SNRPD3P62318 126 aaKnown RBP11□□□□□ -0.65
COMMD4-221ENST00000567935 ERCC8Q13216 396 aa11□□□□□ -0.65
COMMD4-221ENST00000567935 LINC01559Q495D7 138 aa11□□□□□ -0.65
COMMD4-221ENST00000567935 OR11H1Q8NG94 326 aa11□□□□□ -0.65
COMMD4-221ENST00000567935 LINC01006Q8NI28 216 aa11□□□□□ -0.65
COMMD4-221ENST00000567935 C20orf173Q96LM9 149 aa11□□□□□ -0.65
COMMD4-221ENST00000567935 GPR61Q9BZJ8 451 aa11□□□□□ -0.65
COMMD4-221ENST00000567935 A0A1B0GUT8 65 aa10.99□□□□□ -0.65
COMMD4-221ENST00000567935 SPINK4O60575 86 aa10.99□□□□□ -0.65
COMMD4-221ENST00000567935 APCSP02743 223 aa10.99□□□□□ -0.65
COMMD4-221ENST00000567935 AKR1D1P51857 326 aa10.99□□□□□ -0.65
COMMD4-221ENST00000567935 OR8A1Q8NGG7 326 aa10.99□□□□□ -0.65
COMMD4-221ENST00000567935 OR9G4Q8NGQ1 327 aa10.99□□□□□ -0.65
COMMD4-221ENST00000567935 PGLYRP4Q96LB8 373 aa10.99□□□□□ -0.65
COMMD4-221ENST00000567935 ODF3Q96PU9 254 aa10.99□□□□□ -0.65
COMMD4-221ENST00000567935 MS4A6AQ9H2W1 248 aa10.99□□□□□ -0.65
COMMD4-221ENST00000567935 TSSC4Q9Y5U2 329 aaPredicted RBP10.99□□□□□ -0.65
COMMD4-221ENST00000567935 K7EQG2 157 aa10.98□□□□□ -0.65
COMMD4-221ENST00000567935 PRB2P02812 416 aaPredicted RBP10.98□□□□□ -0.65
COMMD4-221ENST00000567935 CRISP2P16562 243 aa10.98□□□□□ -0.65
COMMD4-221ENST00000567935 S100A2P29034 98 aa10.98□□□□□ -0.65
COMMD4-221ENST00000567935 Q0VG73 95 aa10.98□□□□□ -0.65
COMMD4-221ENST00000567935 HIST3H2BBQ8N257 126 aa10.98□□□□□ -0.65
COMMD4-221ENST00000567935 GATD1Q8NB37 220 aa10.98□□□□□ -0.65
COMMD4-221ENST00000567935 CTRLP40313 264 aa10.97□□□□□ -0.65
COMMD4-221ENST00000567935 ZNF80P51504 273 aaPredicted RBP10.97□□□□□ -0.65
COMMD4-221ENST00000567935 SLURP1P55000 103 aa10.97□□□□□ -0.65
COMMD4-221ENST00000567935 FHL3Q13643 280 aa10.97□□□□□ -0.65
COMMD4-221ENST00000567935 OR10J3Q5JRS4 329 aa10.97□□□□□ -0.65
COMMD4-221ENST00000567935 APRG1Q8IVJ8 170 aa10.97□□□□□ -0.65
COMMD4-221ENST00000567935 F2Z2F3 143 aa10.96□□□□□ -0.65
COMMD4-221ENST00000567935 ORM1P02763 201 aa10.96□□□□□ -0.65
COMMD4-221ENST00000567935 FAM19A4Q96LR4 140 aa10.96□□□□□ -0.65
COMMD4-221ENST00000567935 SIGLEC8Q9NYZ4 499 aa10.96□□□□□ -0.65
COMMD4-221ENST00000567935 IGKV3-7A0A075B6H7 116 aa10.95□□□□□ -0.66
COMMD4-221ENST00000567935 TRAV25A0A0B4J276 109 aa10.95□□□□□ -0.66
COMMD4-221ENST00000567935 TRAV21A0A0B4J279 112 aa10.95□□□□□ -0.66
COMMD4-221ENST00000567935 DUSP14O95147 198 aaKnown RBP10.95□□□□□ -0.66
COMMD4-221ENST00000567935 FRMD6-AS1P0C7T7 363 aa10.95□□□□□ -0.66
COMMD4-221ENST00000567935 IGLC6P0CF74 106 aa10.95□□□□□ -0.66
COMMD4-221ENST00000567935 GZMBP10144 247 aa10.95□□□□□ -0.66
COMMD4-221ENST00000567935 EDN2P20800 178 aa10.95□□□□□ -0.66
COMMD4-221ENST00000567935 CAMPP49913 170 aa10.95□□□□□ -0.66
COMMD4-221ENST00000567935 DEFB136Q30KP8 78 aa10.95□□□□□ -0.66
COMMD4-221ENST00000567935 C18orf65Q6ZTR6 163 aa10.95□□□□□ -0.66
COMMD4-221ENST00000567935 FER1L6-AS1Q8NA97 138 aa10.95□□□□□ -0.66
COMMD4-221ENST00000567935 A0A1B0GUS0 222 aa10.94□□□□□ -0.66
COMMD4-221ENST00000567935 CCL24O00175 119 aa10.94□□□□□ -0.66
COMMD4-221ENST00000567935 SMIM6P0DI80 62 aa10.94□□□□□ -0.66
COMMD4-221ENST00000567935 ESDP10768 282 aa10.94□□□□□ -0.66
COMMD4-221ENST00000567935 BEAN1Q3B7T3 259 aa10.94□□□□□ -0.66
COMMD4-221ENST00000567935 EBLN2Q6P2I7 272 aa10.94□□□□□ -0.66
COMMD4-221ENST00000567935 ZFAND2AQ8N6M9 145 aa10.94□□□□□ -0.66
COMMD4-221ENST00000567935 DYNLRB2Q8TF09 96 aa10.94□□□□□ -0.66
COMMD4-221ENST00000567935 TMEM18Q96B42 140 aa10.94□□□□□ -0.66
COMMD4-221ENST00000567935 CITED1Q99966 193 aa10.94□□□□□ -0.66
COMMD4-221ENST00000567935 CNFNQ9BYD5 112 aa10.94□□□□□ -0.66
COMMD4-221ENST00000567935 RNF114Q9Y508 228 aa10.94□□□□□ -0.66
COMMD4-221ENST00000567935 CSN3P07498 182 aa10.93□□□□□ -0.66
COMMD4-221ENST00000567935 ARMS2P0C7Q2 107 aa10.93□□□□□ -0.66
COMMD4-221ENST00000567935 PRB4P10163 310 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms