RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 A6NDX4 124 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 LINC01546A6NGU7 62 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 G3V318 75 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 HBDP02042 147 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 CKS2P33552 79 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 HINT1P49773 126 aaPredicted RBP13.62□□□□□ -0.23
CMTM3-214ENST00000567572 ATP5G2Q06055 141 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 LGALS9BQ3B8N2 356 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 LGALS9CQ6DKI2 356 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 CLEC19AQ6UXS0 136 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 CBY1Q9Y3M2 126 aa13.62□□□□□ -0.23
CMTM3-214ENST00000567572 A0A096LNJ9 63 aa13.61□□□□□ -0.23
CMTM3-214ENST00000567572 H3BUX3 64 aa13.61□□□□□ -0.23
CMTM3-214ENST00000567572 PLA2G2AP14555 144 aa13.61□□□□□ -0.23
CMTM3-214ENST00000567572 HLA-DMBP28068 263 aa13.61□□□□□ -0.23
CMTM3-214ENST00000567572 C12orf54Q6X4T0 127 aa13.61□□□□□ -0.23
CMTM3-214ENST00000567572 RNF223E7ERA6 249 aa13.6□□□□□ -0.23
CMTM3-214ENST00000567572 ORM1P02763 201 aa13.6□□□□□ -0.23
CMTM3-214ENST00000567572 Q5PR19 223 aa13.6□□□□□ -0.23
CMTM3-214ENST00000567572 TRAV41A0A0B4J266 112 aa13.6□□□□□ -0.23
CMTM3-214ENST00000567572 NPSP0C0P6 89 aa13.6□□□□□ -0.23
CMTM3-214ENST00000567572 PSMG4Q5JS54 123 aa13.6□□□□□ -0.23
CMTM3-214ENST00000567572 TMEM78Q5T7P6 136 aa13.6□□□□□ -0.23
CMTM3-214ENST00000567572 ZNF575Q86XF7 245 aa13.6□□□□□ -0.23
CMTM3-214ENST00000567572 MAPK1IP1LQ8NDC0 245 aa13.6□□□□□ -0.23
CMTM3-214ENST00000567572 LENEPQ9Y5L5 61 aa13.6□□□□□ -0.23
CMTM3-214ENST00000567572 H3BUA1 57 aa13.59□□□□□ -0.23
CMTM3-214ENST00000567572 TCF21O43680 179 aa13.59□□□□□ -0.23
CMTM3-214ENST00000567572 C9orf47Q6ZRZ4 202 aa13.59□□□□□ -0.23
CMTM3-214ENST00000567572 ZNF738Q8NE65 137 aa13.59□□□□□ -0.23
CMTM3-214ENST00000567572 OR1N2Q8NGR9 330 aa13.59□□□□□ -0.23
CMTM3-214ENST00000567572 COX11Q9Y6N1 276 aa13.59□□□□□ -0.23
CMTM3-214ENST00000567572 ZFHX3Q15911 3703 aa13.59□□□□□ -0.23
CMTM3-214ENST00000567572 IGHV3-35A0A0C4DH35 117 aa13.58□□□□□ -0.23
CMTM3-214ENST00000567572 TGFAP01135 160 aa13.58□□□□□ -0.23
CMTM3-214ENST00000567572 COX8AP10176 69 aa13.58□□□□□ -0.23
CMTM3-214ENST00000567572 LY6EQ16553 131 aa13.58□□□□□ -0.23
CMTM3-214ENST00000567572 IGFL4Q6B9Z1 124 aa13.58□□□□□ -0.23
CMTM3-214ENST00000567572 MAP1LC3AQ9H492 121 aa13.58□□□□□ -0.23
CMTM3-214ENST00000567572 ABCA12Q86UK0 2595 aa13.58□□□□□ -0.23
CMTM3-214ENST00000567572 PRAC2D3DTV9 90 aa13.58□□□□□ -0.24
CMTM3-214ENST00000567572 IGHV4-31P0DP07 118 aa13.58□□□□□ -0.24
CMTM3-214ENST00000567572 C8orf86Q6ZUL3 223 aa13.58□□□□□ -0.24
CMTM3-214ENST00000567572 C9orf139Q6ZV77 190 aa13.58□□□□□ -0.24
CMTM3-214ENST00000567572 NXT2Q9NPJ8 142 aaKnown RBP13.58□□□□□ -0.24
CMTM3-214ENST00000567572 APCP25054 2843 aa13.58□□□□□ -0.24
CMTM3-214ENST00000567572 IGHV3OR16-8A0A075B7F1 116 aa13.57□□□□□ -0.24
CMTM3-214ENST00000567572 TRAV8-2A0A0B4J237 113 aa13.57□□□□□ -0.24
CMTM3-214ENST00000567572 J3QKU1 62 aa13.57□□□□□ -0.24
CMTM3-214ENST00000567572 NPYP01303 97 aa13.57□□□□□ -0.24
CMTM3-214ENST00000567572 IGF1P05019 195 aa13.57□□□□□ -0.24
CMTM3-214ENST00000567572 PRB4P10163 310 aaPredicted RBP13.57□□□□□ -0.24
CMTM3-214ENST00000567572 RNF185Q96GF1 192 aa13.57□□□□□ -0.24
CMTM3-214ENST00000567572 NAV2Q8IVL1 2488 aa13.57□□□□□ -0.24
CMTM3-214ENST00000567572 CR1P17927 2039 aa13.57□□□□□ -0.24
CMTM3-214ENST00000567572 ERCC8Q13216 396 aa13.56□□□□□ -0.24
CMTM3-214ENST00000567572 IL17RELQ6ZVW7 336 aa13.56□□□□□ -0.24
CMTM3-214ENST00000567572 KRTAP1-3Q8IUG1 177 aa13.56□□□□□ -0.24
CMTM3-214ENST00000567572 AGPAT4-IT1Q9H0P7 198 aa13.56□□□□□ -0.24
CMTM3-214ENST00000567572 LOC389332A0A1B0GUA5 103 aa13.56□□□□□ -0.24
CMTM3-214ENST00000567572 IGHG2P01859 326 aa13.56□□□□□ -0.24
CMTM3-214ENST00000567572 RNF182Q8N6D2 247 aa13.56□□□□□ -0.24
CMTM3-214ENST00000567572 FSHBP01225 129 aa13.55□□□□□ -0.24
CMTM3-214ENST00000567572 FAM106AQ4KMX7 169 aa13.55□□□□□ -0.24
CMTM3-214ENST00000567572 PRSS57Q6UWY2 283 aa13.55□□□□□ -0.24
CMTM3-214ENST00000567572 DEFB125Q8N687 156 aa13.55□□□□□ -0.24
CMTM3-214ENST00000567572 GLMPQ8WWB7 406 aa13.55□□□□□ -0.24
CMTM3-214ENST00000567572 IGHV4-4A0A075B6R2 117 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 H0Y8G0 127 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 NDUFA4O00483 81 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 BVES-AS1Q5T3Y7 98 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 OR8A1Q8NGG7 326 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 IFI27L1Q96BM0 104 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 USMG5Q96IX5 58 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 ZANQ9Y493 2812 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 CACNG7P62955 275 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 DEFB112Q30KQ8 113 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 MPV17L2Q567V2 206 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 SMIM15Q7Z3B0 74 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 Q96MF0 132 aa13.54□□□□□ -0.24
CMTM3-214ENST00000567572 TIMM8BQ9Y5J9 83 aaPredicted RBP13.54□□□□□ -0.24
CMTM3-214ENST00000567572 IGKV3D-20A0A0C4DH25 116 aa13.53□□□□□ -0.24
CMTM3-214ENST00000567572 PRSS47A8MTI9 375 aa13.53□□□□□ -0.24
CMTM3-214ENST00000567572 NCR2O95944 276 aa13.53□□□□□ -0.24
CMTM3-214ENST00000567572 TRGV3P03979 118 aa13.53□□□□□ -0.24
CMTM3-214ENST00000567572 ARL3P36405 182 aa13.53□□□□□ -0.24
CMTM3-214ENST00000567572 LINC00527Q9UJ94 153 aa13.53□□□□□ -0.24
CMTM3-214ENST00000567572 NUDT3O95989 172 aa13.52□□□□□ -0.24
CMTM3-214ENST00000567572 IGHV3-66A0A0C4DH42 116 aa13.52□□□□□ -0.25
CMTM3-214ENST00000567572 MUC21A0A0G2JKD1 596 aa13.52□□□□□ -0.25
CMTM3-214ENST00000567572 MUC21A0A140T8X8 626 aa13.52□□□□□ -0.25
CMTM3-214ENST00000567572 SNAI2O43623 268 aa13.52□□□□□ -0.25
CMTM3-214ENST00000567572 TNFRSF6BO95407 300 aa13.52□□□□□ -0.25
CMTM3-214ENST00000567572 BLCAPP62952 87 aa13.52□□□□□ -0.25
CMTM3-214ENST00000567572 MUC21Q5SSG8 566 aa13.52□□□□□ -0.25
CMTM3-214ENST00000567572 C16orf92Q96LL3 132 aa13.52□□□□□ -0.25
CMTM3-214ENST00000567572 FCER1GP30273 86 aa13.51□□□□□ -0.25
CMTM3-214ENST00000567572 PPIFP30405 207 aaKnown RBP13.51□□□□□ -0.25
CMTM3-214ENST00000567572 UBE2V1Q13404 147 aa13.51□□□□□ -0.25
CMTM3-214ENST00000567572 LINC00477Q96M19 166 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms