RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 CASZ1Q86V15 1759 aa-0.29□□□□□ -2.46
CDH1-211ENST00000567320 ARHGAP31Q2M1Z3 1444 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 TRAPPC8Q9Y2L5 1435 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 IFT172Q9UG01 1749 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 ADCY9O60503 1353 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 JMJD1CQ15652 2540 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 LRP6O75581 1613 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 HECTD4Q9Y4D8 3996 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 CXorf51AA0A1B0GTR3 108 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 TRDV1A0A1B0GX56 115 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 TMEM30CPA0ZSE6 113 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 ZNF815PA8K554 130 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 HIGD1CA8MV81 97 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 TMEM114B3SHH9 223 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 C9JAW5 83 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 F2Z2F3 143 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 GABARAPH6UMI1 98 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 K7EQZ3 153 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 M0R3E3 92 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 CETN3O15182 167 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 MFSD11O43934 449 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 EDF1O60869 148 aaKnown RBP-0.3□□□□□ -2.46
CDH1-211ENST00000567320 IFNA7P01567 189 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 CCKP06307 115 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 CST2P09228 141 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 RPL35P42766 123 aaKnown RBP-0.3□□□□□ -2.46
CDH1-211ENST00000567320 OMPP47874 163 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 MAXP61244 160 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 NPC2P61916 151 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 LCN6P62502 163 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 GNG5P63218 68 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 HIST1H3AP68431 136 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 H3F3AP84243 136 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 RBM3P98179 157 aaKnown RBP-0.3□□□□□ -2.46
CDH1-211ENST00000567320 FADDQ13158 208 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 LIN52Q52LA3 116 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 CCDC122Q5T0U0 273 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 Q5VSD8 79 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 FKBP1CQ5VVH2 108 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 C1orf140Q5VVS0 124 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 HRCT1Q6UXD1 115 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 IDO2Q6ZQW0 420 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 C3orf62Q6ZUJ4 267 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 PHF5AQ7RTV0 110 aaKnown RBP-0.3□□□□□ -2.46
CDH1-211ENST00000567320 TCTEX1D1Q8N7M0 179 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 OR51A4Q8NGJ6 313 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 OR5AK2Q8NH90 309 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 GNPDA2Q8TDQ7 276 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 DMAC1Q96GE9 116 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 CIB3Q96Q77 187 aaPredicted RBP-0.3□□□□□ -2.46
CDH1-211ENST00000567320 C9orf16Q9BUW7 83 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 EFCAB11Q9BUY7 163 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 MRPS26Q9BYN8 205 aaKnown RBP-0.3□□□□□ -2.46
CDH1-211ENST00000567320 TRIM4Q9C037 500 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 CYP4F30PQ9H0H9 118 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 LRTM1Q9HBL6 345 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 ARMC1Q9NVT9 282 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 PRNDQ9UKY0 176 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 TPRKBQ9Y3C4 175 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 FAM32AQ9Y421 112 aaKnown RBP-0.3□□□□□ -2.46
CDH1-211ENST00000567320 PHIPQ8WWQ0 1821 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 ARFGEF1Q9Y6D6 1849 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 ZMYM4Q5VZL5 1548 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 ZANQ9Y493 2812 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 NRXN2Q9P2S2 1712 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 SVEP1Q4LDE5 3571 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 CADP27708 2225 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 KNTC1P50748 2209 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 C10orf71Q711Q0 1435 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 ANK2Q01484 3957 aa-0.3□□□□□ -2.46
CDH1-211ENST00000567320 FREM3P0C091 2139 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 FER1L6Q2WGJ9 1857 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.31□□□□□ -2.46
CDH1-211ENST00000567320 NUP210Q8TEM1 1887 aaPredicted RBP-0.31□□□□□ -2.46
CDH1-211ENST00000567320 BICRAQ9NZM4 1560 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 F5P12259 2224 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 NSD1Q96L73 2696 aaPredicted RBP-0.31□□□□□ -2.46
CDH1-211ENST00000567320 USH2AO75445 5202 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 TRGV1A0A0A0MS02 117 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 TRAV17A0A0B4J275 112 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 CLPSL1A2RUU4 121 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 ARL5CA6NH57 179 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 TMEM210A6NLX4 147 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 RIIAD1A6NNX1 92 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 BBIP1A8MTZ0 92 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 G3V2T6 193 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 M0QZK8 103 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 LYRM1O43325 122 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 OR2H2O95918 312 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 TRACP01848 142 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 IFNA6P05013 189 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 IFNA4P05014 189 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 TPM3P06753 285 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 CTXN2P0C2S0 81 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 FABP2P12104 132 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 SLC25A4P12235 298 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 CCL3L1P16619 93 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 ADCYAP1P18509 176 aa-0.31□□□□□ -2.46
CDH1-211ENST00000567320 OGNP20774 298 aaKnown RBP-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms