RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 H3BRM9 83 aa17.95■□□□□ 0.46
LINC00543-201ENST00000567234 BUB3O43684 328 aa17.95■□□□□ 0.46
LINC00543-201ENST00000567234 SMIM17P0DL12 118 aa17.95■□□□□ 0.46
LINC00543-201ENST00000567234 WFDC11Q8NEX6 87 aa17.95■□□□□ 0.46
LINC00543-201ENST00000567234 OR1N2Q8NGR9 330 aa17.95■□□□□ 0.46
LINC00543-201ENST00000567234 LINC00527Q9UJ94 153 aa17.95■□□□□ 0.46
LINC00543-201ENST00000567234 A0A087X0K7 114 aa17.94■□□□□ 0.46
LINC00543-201ENST00000567234 CA1P00915 261 aaPredicted RBP17.94■□□□□ 0.46
LINC00543-201ENST00000567234 FSHBP01225 129 aa17.94■□□□□ 0.46
LINC00543-201ENST00000567234 CSN1S1P47710 185 aa17.94■□□□□ 0.46
LINC00543-201ENST00000567234 PSG3Q16557 428 aa17.94■□□□□ 0.46
LINC00543-201ENST00000567234 DEFB112Q30KQ8 113 aa17.94■□□□□ 0.46
LINC00543-201ENST00000567234 CLEC5AQ9NY25 188 aa17.94■□□□□ 0.46
LINC00543-201ENST00000567234 ITPR3Q14573 2671 aa17.94■□□□□ 0.46
LINC00543-201ENST00000567234 CLPSL1A2RUU4 121 aa17.93■□□□□ 0.46
LINC00543-201ENST00000567234 BLCAPP62952 87 aa17.93■□□□□ 0.46
LINC00543-201ENST00000567234 GATD1Q8NB37 220 aa17.93■□□□□ 0.46
LINC00543-201ENST00000567234 SMAD5-AS1Q9Y6J3 95 aa17.93■□□□□ 0.46
LINC00543-201ENST00000567234 TRAV8-1A0A0A6YYK1 113 aa17.93■□□□□ 0.46
LINC00543-201ENST00000567234 IGHV3-35A0A0C4DH35 117 aa17.93■□□□□ 0.46
LINC00543-201ENST00000567234 A0A1B0GW15 77 aa17.93■□□□□ 0.46
LINC00543-201ENST00000567234 GAGE10A6NGK3 116 aa17.93■□□□□ 0.46
LINC00543-201ENST00000567234 FBLL1A6NHQ2 334 aaKnown RBP17.93■□□□□ 0.46
LINC00543-201ENST00000567234 SIVA1O15304 175 aa17.93■□□□□ 0.46
LINC00543-201ENST00000567234 RBPMS2Q6ZRY4 209 aaKnown RBP17.93■□□□□ 0.46
LINC00543-201ENST00000567234 C9orf139Q6ZV77 190 aa17.93■□□□□ 0.46
LINC00543-201ENST00000567234 PRNTQ86SH4 94 aa17.93■□□□□ 0.46
LINC00543-201ENST00000567234 SCGB1A1P11684 91 aa17.92■□□□□ 0.46
LINC00543-201ENST00000567234 OR5A1Q8NGJ0 315 aa17.92■□□□□ 0.46
LINC00543-201ENST00000567234 DAZAP1Q96EP5 407 aaKnown RBP17.92■□□□□ 0.46
LINC00543-201ENST00000567234 METTL26Q96S19 204 aa17.92■□□□□ 0.46
LINC00543-201ENST00000567234 PSG8Q9UQ74 426 aa17.92■□□□□ 0.46
LINC00543-201ENST00000567234 LOC102724200A0A096LPH7 203 aaPredicted RBP17.91■□□□□ 0.46
LINC00543-201ENST00000567234 C7orf71A4D174 169 aa17.91■□□□□ 0.46
LINC00543-201ENST00000567234 G3V4G9 280 aa17.91■□□□□ 0.46
LINC00543-201ENST00000567234 P01737 135 aa17.91■□□□□ 0.46
LINC00543-201ENST00000567234 FER1L6-AS1Q8NA97 138 aa17.91■□□□□ 0.46
LINC00543-201ENST00000567234 U3KQE9 123 aa17.91■□□□□ 0.46
LINC00543-201ENST00000567234 C9orf118A6NHY6 69 aa17.91■□□□□ 0.46
LINC00543-201ENST00000567234 NPIPB6E9PJ23 425 aa17.91■□□□□ 0.46
LINC00543-201ENST00000567234 IGLV1-40P01703 118 aa17.91■□□□□ 0.46
LINC00543-201ENST00000567234 TMEM97Q5BJF2 176 aa17.91■□□□□ 0.46
LINC00543-201ENST00000567234 LINC00322Q6ZN03 302 aaPredicted RBP17.91■□□□□ 0.46
LINC00543-201ENST00000567234 hDV102S1A0JD36 115 aa17.9■□□□□ 0.46
LINC00543-201ENST00000567234 M0R3E3 92 aa17.9■□□□□ 0.46
LINC00543-201ENST00000567234 HAX1O00165 279 aa17.9■□□□□ 0.46
LINC00543-201ENST00000567234 CAMPP49913 170 aa17.9■□□□□ 0.46
LINC00543-201ENST00000567234 AP1S3Q96PC3 154 aa17.9■□□□□ 0.46
LINC00543-201ENST00000567234 CREBBPQ92793 2442 aa17.9■□□□□ 0.46
LINC00543-201ENST00000567234 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.89■□□□□ 0.45
LINC00543-201ENST00000567234 TRAV8-6A0A0B4J262 113 aa17.89■□□□□ 0.45
LINC00543-201ENST00000567234 FOXA3P55318 350 aaPredicted RBP17.89■□□□□ 0.45
LINC00543-201ENST00000567234 CFHR3Q02985 330 aa17.89■□□□□ 0.45
LINC00543-201ENST00000567234 CIARTQ8N365 385 aaPredicted RBP17.89■□□□□ 0.45
LINC00543-201ENST00000567234 OR9G4Q8NGQ1 327 aa17.89■□□□□ 0.45
LINC00543-201ENST00000567234 IGHV3OR16-8A0A075B7F1 116 aa17.88■□□□□ 0.45
LINC00543-201ENST00000567234 A0A0G2JLM5 398 aa17.88■□□□□ 0.45
LINC00543-201ENST00000567234 IGHV4-59P01825 116 aa17.88■□□□□ 0.45
LINC00543-201ENST00000567234 ARL3P36405 182 aa17.88■□□□□ 0.45
LINC00543-201ENST00000567234 K7EP34 96 aa17.88■□□□□ 0.45
LINC00543-201ENST00000567234 C16orf54Q6UWD8 224 aa17.88■□□□□ 0.45
LINC00543-201ENST00000567234 SSBP4Q9BWG4 385 aaPredicted RBP17.88■□□□□ 0.45
LINC00543-201ENST00000567234 ZNF785A8K8V0 405 aa17.87■□□□□ 0.45
LINC00543-201ENST00000567234 Q6ZS46 218 aa17.87■□□□□ 0.45
LINC00543-201ENST00000567234 C2orf91Q6ZV80 131 aa17.87■□□□□ 0.45
LINC00543-201ENST00000567234 SLC50A1Q9BRV3 221 aa17.87■□□□□ 0.45
LINC00543-201ENST00000567234 NDUFA4O00483 81 aa17.86■□□□□ 0.45
LINC00543-201ENST00000567234 NEGR1Q7Z3B1 354 aa17.86■□□□□ 0.45
LINC00543-201ENST00000567234 CHEK1O14757 476 aa17.86■□□□□ 0.45
LINC00543-201ENST00000567234 PF4V1P10720 104 aa17.86■□□□□ 0.45
LINC00543-201ENST00000567234 COX8CQ7Z4L0 72 aa17.86■□□□□ 0.45
LINC00543-201ENST00000567234 HSD52Q0P140 79 aa17.85■□□□□ 0.45
LINC00543-201ENST00000567234 OR4X2Q8NGF9 303 aa17.85■□□□□ 0.45
LINC00543-201ENST00000567234 ZC2HC1AQ96GY0 325 aa17.85■□□□□ 0.45
LINC00543-201ENST00000567234 FOXC2Q99958 501 aa17.85■□□□□ 0.45
LINC00543-201ENST00000567234 FLNAP21333 2647 aaKnown RBP17.85■□□□□ 0.45
LINC00543-201ENST00000567234 AKAP9Q99996 3911 aa17.85■□□□□ 0.45
LINC00543-201ENST00000567234 IGHG4P01861 327 aa17.84■□□□□ 0.45
LINC00543-201ENST00000567234 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.84■□□□□ 0.45
LINC00543-201ENST00000567234 Q6YL49 198 aa17.84■□□□□ 0.45
LINC00543-201ENST00000567234 ZFHX3Q15911 3703 aa17.84■□□□□ 0.45
LINC00543-201ENST00000567234 TMEM89A2RUT3 159 aa17.84■□□□□ 0.45
LINC00543-201ENST00000567234 KLK15Q9H2R5 256 aa17.84■□□□□ 0.45
LINC00543-201ENST00000567234 VPREB3Q9UKI3 123 aa17.84■□□□□ 0.45
LINC00543-201ENST00000567234 NOTCH2Q04721 2471 aa17.83■□□□□ 0.44
LINC00543-201ENST00000567234 OR10AG1Q8NH19 301 aa17.83■□□□□ 0.44
LINC00543-201ENST00000567234 APOHP02749 345 aaPredicted RBP17.82■□□□□ 0.44
LINC00543-201ENST00000567234 Q6AWC8 147 aa17.82■□□□□ 0.44
LINC00543-201ENST00000567234 ZNF747Q9BV97 191 aa17.82■□□□□ 0.44
LINC00543-201ENST00000567234 AP5S1Q9NUS5 200 aa17.82■□□□□ 0.44
LINC00543-201ENST00000567234 TEX15Q9BXT5 2789 aa17.82■□□□□ 0.44
LINC00543-201ENST00000567234 MYO9AB2RTY4 2548 aa17.82■□□□□ 0.44
LINC00543-201ENST00000567234 SMAD7O15105 426 aaKnown RBP17.82■□□□□ 0.44
LINC00543-201ENST00000567234 CT45A10P0DMU9 189 aa17.82■□□□□ 0.44
LINC00543-201ENST00000567234 GTSF1Q8WW33 167 aa17.82■□□□□ 0.44
LINC00543-201ENST00000567234 MRPL53Q96EL3 112 aaKnown RBP17.82■□□□□ 0.44
LINC00543-201ENST00000567234 NPFFR1Q9GZQ6 430 aa17.82■□□□□ 0.44
LINC00543-201ENST00000567234 RBAKDNA6NC62 111 aa17.81■□□□□ 0.44
LINC00543-201ENST00000567234 LGALS9BQ3B8N2 356 aa17.81■□□□□ 0.44
LINC00543-201ENST00000567234 LGALS9CQ6DKI2 356 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 209.2 ms