RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 PRR25Q96S07 402 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 NHP2Q9NX24 153 aaKnown RBP5.03□□□□□ -1.6
GINS3-206ENST00000567143 SOX21Q9Y651 276 aaPredicted RBP5.03□□□□□ -1.6
GINS3-206ENST00000567143 MTORP42345 2549 aa5.03□□□□□ -1.6
GINS3-206ENST00000567143 INS-IGF2F8WCM5 200 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 CD5LO43866 347 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 NDUFA3O95167 84 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 FXYD2P54710 66 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 EMP1P54849 157 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 C5orf64Q2M2E5 130 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 C15orf32Q32M92 178 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 SPCS1Q9Y6A9 102 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 OVOL3O00110 214 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 TNFRSF13BO14836 293 aaPredicted RBP5.02□□□□□ -1.61
GINS3-206ENST00000567143 IGF1P05019 195 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 SRD5A1P18405 259 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 CDKN1BP46527 198 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 AMTNQ6UX39 209 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 TMEM158Q8WZ71 300 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 NOTCH2Q04721 2471 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 ABCA2Q9BZC7 2435 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 TRAV40A0A0B4J280 105 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 M0R381 172 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 SAPCD1Q5SSQ6 148 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 ZC2HC1BQ5TFG8 222 aa5.02□□□□□ -1.61
GINS3-206ENST00000567143 B9A039 149 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 SMAD7O15105 426 aaKnown RBP5.01□□□□□ -1.61
GINS3-206ENST00000567143 PLP1P60201 277 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 NEGR1Q7Z3B1 354 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 OR2K2Q8NGT1 345 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 CFHR4Q92496 578 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 UBTD1Q9HAC8 227 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 TMEM14CQ9P0S9 112 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 TENM4Q6N022 2769 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 K7ERU9 68 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 TGFAP01135 160 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 CTSGP08311 255 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 FGF6P10767 208 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 PVRIGQ6DKI7 326 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 MS4A6AQ9H2W1 248 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 KAAG1Q9UBP8 84 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 SMAD5-AS1Q9Y6J3 95 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 A6NDN8 102 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 F8W735 103 aaPredicted RBP5.01□□□□□ -1.61
GINS3-206ENST00000567143 H3BVH4 76 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 TNFRSF6BO95407 300 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 IGHV3-11P01762 117 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 RPL7P18124 248 aaKnown RBP5.01□□□□□ -1.61
GINS3-206ENST00000567143 SPANXN1Q5VSR9 72 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 VMO1Q7Z5L0 202 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 LRRC75A-AS1Q8N1F1 130 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 OR1N2Q8NGR9 330 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 MAP1LC3AQ9H492 121 aa5.01□□□□□ -1.61
GINS3-206ENST00000567143 ZFP36P26651 326 aaKnown RBP5□□□□□ -1.61
GINS3-206ENST00000567143 DTX2Q86UW9 622 aa5□□□□□ -1.61
GINS3-206ENST00000567143 SMIM12Q96EX1 92 aa5□□□□□ -1.61
GINS3-206ENST00000567143 MRPL35Q9NZE8 188 aaKnown RBP5□□□□□ -1.61
GINS3-206ENST00000567143 C11orf21Q9P2W6 132 aa5□□□□□ -1.61
GINS3-206ENST00000567143 MXRA5Q9NR99 2828 aa5□□□□□ -1.61
GINS3-206ENST00000567143 C19orf84I3L1E1 186 aa5□□□□□ -1.61
GINS3-206ENST00000567143 MRPS12O15235 138 aaKnown RBP5□□□□□ -1.61
GINS3-206ENST00000567143 TIMD4Q96H15 378 aa5□□□□□ -1.61
GINS3-206ENST00000567143 F6UB75 175 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 ATP6V0E1O15342 81 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 IGHG4P01861 327 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 MGPP08493 103 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 GTF2H5Q6ZYL4 71 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 GTSF1LQ9H1H1 148 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 IGLV11-55A0A075B6I3 123 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 CEACAM3P40198 252 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 LY6EQ16553 131 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 SAMD5Q5TGI4 173 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 BRD3OSQ6XYD6 125 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 IGHV7-81A0A0B4J1V7 117 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 WI2-2373I1.2A0A1W2PRP0 233 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 C9orf118A6NHY6 69 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 FABP5P3A8MUU1 101 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 IGKV3-20P01619 116 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 SMIM17P0DL12 118 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 FABP2P12104 132 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 S100A4P26447 101 aaKnown RBP4.99□□□□□ -1.61
GINS3-206ENST00000567143 ZNF562Q6V9R5 426 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 SMIM15Q7Z3B0 74 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 SH2D6Q7Z4S9 175 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 S100A7AQ86SG5 101 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 BOD1L2Q8IYS8 172 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 ARL6IP6Q8N6S5 226 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 CHAC1Q9BUX1 264 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 AGPAT4-IT1Q9H0P7 198 aa4.99□□□□□ -1.61
GINS3-206ENST00000567143 FN1P02751 2386 aaKnown RBP4.98□□□□□ -1.61
GINS3-206ENST00000567143 IGKV3D-20A0A0C4DH25 116 aa4.98□□□□□ -1.61
GINS3-206ENST00000567143 TEX48A0A1B0GUV7 120 aa4.98□□□□□ -1.61
GINS3-206ENST00000567143 H3BMG7 143 aa4.98□□□□□ -1.61
GINS3-206ENST00000567143 HOXB4P17483 251 aaPredicted RBP4.98□□□□□ -1.61
GINS3-206ENST00000567143 BMI1P35226 326 aa4.98□□□□□ -1.61
GINS3-206ENST00000567143 SEC11AP67812 179 aa4.98□□□□□ -1.61
GINS3-206ENST00000567143 HSD52Q0P140 79 aa4.98□□□□□ -1.61
GINS3-206ENST00000567143 SMAGPQ0VAQ4 97 aa4.98□□□□□ -1.61
GINS3-206ENST00000567143 SCGB2A2Q13296 93 aa4.98□□□□□ -1.61
GINS3-206ENST00000567143 MAPKAPK5-AS1Q8N8E1 139 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms